BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027162
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methy...   372   e-100
ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|2...   359   5e-97
ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus co...   347   3e-93
ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methy...   342   7e-92
ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferas...   325   1e-86

>ref|XP_002283664.2| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Vitis vinifera] gi|297733841|emb|CBI15088.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  372 bits (954), Expect = e-100
 Identities = 187/281 (66%), Positives = 219/281 (77%), Gaps = 6/281 (2%)
 Frame = +2

Query: 5   KIPNIYHSLSLPTFIKHLTPA------PHFSTSRPNLTTSCSNQVSPLLQTLNSRQKEQI 166
           K+P +   LS+ TF+K +T +      PH   ++   TT   N  S   +TLN  QK+QI
Sbjct: 7   KVPGVSSPLSVGTFVKQVTTSISTRFRPHRIATKTLTTTKVLN--SSYFETLNPLQKQQI 64

Query: 167 SLYINVLQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSSYENINLVDV 346
           SLY++ L +WN+KMNLTAVT+ +EVM+RHV DSLA+IPPIQ+SY +HC SS  NI+LVDV
Sbjct: 65  SLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNISLVDV 124

Query: 347 GSGAGLPGLIFAIACPGWKVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLD 526
           GSG GLPGLI AIACP WK+TLLESMNKRC+FLEHAVS+TGLSNV+V+RGRAEN+GQN+ 
Sbjct: 125 GSGPGLPGLILAIACPSWKITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQNIG 184

Query: 527 FREVFDXXXXXXXXXXXXXXXYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVL 706
           FREVFD               YCLPLVRVGGLF+AAKGHDPQEEVRNA RAI L+GASVL
Sbjct: 185 FREVFDVAVARAVAEMRILAEYCLPLVRVGGLFLAAKGHDPQEEVRNAERAIQLMGASVL 244

Query: 707 QLSSVESHSPYGQRTAVVCLKDRPTPRKYPRDPGTPAKVPL 829
           QL SVESHSP+GQRTA+VCLKD PTPRKYPRDPGTP K PL
Sbjct: 245 QLCSVESHSPFGQRTAIVCLKDCPTPRKYPRDPGTPVKSPL 285


>ref|XP_002318633.1| predicted protein [Populus trichocarpa] gi|222859306|gb|EEE96853.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  359 bits (922), Expect = 5e-97
 Identities = 178/282 (63%), Positives = 210/282 (74%), Gaps = 7/282 (2%)
 Frame = +2

Query: 5   KIPNIYHSLSLPTFIKHLT-------PAPHFSTSRPNLTTSCSNQVSPLLQTLNSRQKEQ 163
           K P +   LSL TF+KH +       P             S     S    + + RQK+Q
Sbjct: 7   KPPAVPFPLSLGTFVKHFSVIEPKAFPLHRIKAKSLTAAASIGTHNSSCFDSFSCRQKKQ 66

Query: 164 ISLYINVLQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSSYENINLVD 343
           I LY++ L +WN+KMNLTAVT+ +EVM+RH+EDSLAI+PPIQ+SY SHC +S ++I LVD
Sbjct: 67  IRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNASIDSIKLVD 126

Query: 344 VGSGAGLPGLIFAIACPGWKVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNL 523
           VG+GAGLPGL+ AIACP WKVTLLESMNKRC FLEHA+SVTGLSNVEV+RGRAEN+GQN+
Sbjct: 127 VGTGAGLPGLVLAIACPAWKVTLLESMNKRCDFLEHAISVTGLSNVEVVRGRAENLGQNV 186

Query: 524 DFREVFDXXXXXXXXXXXXXXXYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASV 703
            FRE FD               YCLPLVRVGGLFIAAKGHDPQEEVRNA R++ L+G+S 
Sbjct: 187 SFREKFDVAVARAVAEMRILAEYCLPLVRVGGLFIAAKGHDPQEEVRNAERSLKLMGSST 246

Query: 704 LQLSSVESHSPYGQRTAVVCLKDRPTPRKYPRDPGTPAKVPL 829
           LQL SVES SPYGQRTA++C KDRPTPRKYPRDPGTPAK+PL
Sbjct: 247 LQLCSVESRSPYGQRTAIICSKDRPTPRKYPRDPGTPAKLPL 288


>ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
           gi|223550574|gb|EEF52061.1| Methyltransferase gidB,
           putative [Ricinus communis]
          Length = 282

 Score =  347 bits (890), Expect = 3e-93
 Identities = 172/237 (72%), Positives = 194/237 (81%)
 Frame = +2

Query: 98  TTSCSNQVSPLLQTLNSRQKEQISLYINVLQEWNKKMNLTAVTETNEVMKRHVEDSLAII 277
           TTSC        ++LNSRQKEQI  Y++ L EWN+KMNLTAVTE NEVM+RH+EDSLA++
Sbjct: 48  TTSC-------FESLNSRQKEQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAML 100

Query: 278 PPIQNSYTSHCQSSYENINLVDVGSGAGLPGLIFAIACPGWKVTLLESMNKRCLFLEHAV 457
            PI+ SY SHC SS +N+ LVDVG+G GLPGLI AIACPGWKVTLLESMNKRC+FLEHAV
Sbjct: 101 TPIRKSYISHCSSSIDNLKLVDVGTGPGLPGLILAIACPGWKVTLLESMNKRCVFLEHAV 160

Query: 458 SVTGLSNVEVLRGRAENVGQNLDFREVFDXXXXXXXXXXXXXXXYCLPLVRVGGLFIAAK 637
           +VTGLSNVEVLRGRAE++GQN  FRE FD               YCLPLVRVGGLFIAAK
Sbjct: 161 NVTGLSNVEVLRGRAESLGQNDSFREQFDVAVARAVAEMRVLAEYCLPLVRVGGLFIAAK 220

Query: 638 GHDPQEEVRNAGRAITLLGASVLQLSSVESHSPYGQRTAVVCLKDRPTPRKYPRDPG 808
           GHDPQEEVRNA R+I L+GASVLQL SVESHSPYGQRTA++ +KDRPTPRKYPRDPG
Sbjct: 221 GHDPQEEVRNAERSIQLMGASVLQLCSVESHSPYGQRTAIISVKDRPTPRKYPRDPG 277


>ref|XP_004152459.1| PREDICTED: ribosomal RNA small subunit methyltransferase G-like
           [Cucumis sativus] gi|449527787|ref|XP_004170891.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           G-like [Cucumis sativus]
          Length = 281

 Score =  342 bits (878), Expect = 7e-92
 Identities = 173/276 (62%), Positives = 207/276 (75%), Gaps = 8/276 (2%)
 Frame = +2

Query: 26  SLSLPTFIKHLTPAPH-------FSTSRPNLTTSCSNQVSPLLQTLNSRQKEQISLYINV 184
           S SL TFIK  +P P          TS   LT +C++      +TL SRQK+Q+ L+++ 
Sbjct: 6   SFSLRTFIKQFSPLPKRTPFSFPIRTSFKRLTVTCNSSRFLHFETLTSRQKDQVHLFVDA 65

Query: 185 LQEWNKKMNLTAVTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSS-YENINLVDVGSGAG 361
           L +WN+KMNLTA+TE NEVM+RHVEDSLAIIPPI+N Y SHC +S  ++I LVDVG+GAG
Sbjct: 66  LLQWNQKMNLTAITEVNEVMERHVEDSLAIIPPIRNLYMSHCSTSPCDDIKLVDVGTGAG 125

Query: 362 LPGLIFAIACPGWKVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLDFREVF 541
           LPGLI AIACP W+VTL+ESMNKRCLFLEHAV  TGL+NV+V+RGRAEN+G +L  RE F
Sbjct: 126 LPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVQVVRGRAENLGHDLSLREKF 185

Query: 542 DXXXXXXXXXXXXXXXYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVLQLSSV 721
           D               YCLP+VRVGGLF+AAKGHDP  EV NA +AI ++GAS+LQ+  V
Sbjct: 186 DVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLAEVTNAEKAIEMMGASLLQICPV 245

Query: 722 ESHSPYGQRTAVVCLKDRPTPRKYPRDPGTPAKVPL 829
           ESHSPYGQRTAVVC K+R TPRKYPRDPGTPAK PL
Sbjct: 246 ESHSPYGQRTAVVCFKERHTPRKYPRDPGTPAKSPL 281


>ref|XP_003608919.1| Ribosomal RNA small subunit methyltransferase G [Medicago truncatula]
            gi|355509974|gb|AES91116.1| Ribosomal RNA small subunit
            methyltransferase G [Medicago truncatula]
          Length = 518

 Score =  325 bits (833), Expect = 1e-86
 Identities = 159/265 (60%), Positives = 200/265 (75%)
 Frame = +2

Query: 41   TFIKHLTPAPHFSTSRPNLTTSCSNQVSPLLQTLNSRQKEQISLYINVLQEWNKKMNLTA 220
            TF KHLTP  + +  + N T++ S+ +     TL SRQK+QI LY++ L +WNK+MNLTA
Sbjct: 248  TFFKHLTPRKYTTLCQNNSTSNLSHFL-----TLTSRQKDQIHLYVDTLLQWNKRMNLTA 302

Query: 221  VTETNEVMKRHVEDSLAIIPPIQNSYTSHCQSSYENINLVDVGSGAGLPGLIFAIACPGW 400
            V E NEVM+RH+EDSLAI+PP+ ++Y SH   S + + LVDVG+GAGLPG++ AIA P W
Sbjct: 303  VKEVNEVMERHIEDSLAILPPLSDNYMSHSSKSIDKVKLVDVGTGAGLPGVVLAIARPDW 362

Query: 401  KVTLLESMNKRCLFLEHAVSVTGLSNVEVLRGRAENVGQNLDFREVFDXXXXXXXXXXXX 580
             VTL+ESMNKRC+FLEH V V G SN++++RGRAE++GQNL +RE FD            
Sbjct: 363  DVTLMESMNKRCVFLEHVVGVIGSSNLQIVRGRAESLGQNLCYREKFDIAVARAVAETRV 422

Query: 581  XXXYCLPLVRVGGLFIAAKGHDPQEEVRNAGRAITLLGASVLQLSSVESHSPYGQRTAVV 760
               YCLPLVRVGG+FIAAKGHDP++EV+ A  AI  +GAS+LQ+ SVES SPYGQRTAV+
Sbjct: 423  LAEYCLPLVRVGGMFIAAKGHDPEDEVKKAENAIKKMGASLLQVCSVESQSPYGQRTAVI 482

Query: 761  CLKDRPTPRKYPRDPGTPAKVPL*K 835
            CLKDRPTP KYPR PGTP+K PL K
Sbjct: 483  CLKDRPTPMKYPRFPGTPSKEPLTK 507