BLASTX nr result

ID: Coptis25_contig00027155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027155
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273527.1| PREDICTED: putative septum site-determining ...   445   e-122
ref|XP_002513656.1| Septum site-determining protein minD, putati...   443   e-122
ref|XP_004160354.1| PREDICTED: putative septum site-determining ...   441   e-121
ref|NP_197790.1| septum site-determining protein (MIND) [Arabido...   440   e-121
gb|AFC37490.1| MinD protein [Manihot esculenta]                       439   e-121

>ref|XP_002273527.1| PREDICTED: putative septum site-determining protein minD homolog,
           chloroplastic [Vitis vinifera]
          Length = 333

 Score =  445 bits (1144), Expect = e-122
 Identities = 242/323 (74%), Positives = 255/323 (78%), Gaps = 8/323 (2%)
 Frame = +3

Query: 3   SLQLHTISPNKKNS---PFPI-STTPKHLI-RKSNLKNKPNKTV---SVLQWNRKPELSG 158
           S QL   +PN  +S   P P  S  PK L   K N K KP+      SVLQWNRKP+L+G
Sbjct: 3   SPQLLPKTPNPLSSIYTPNPFKSLNPKTLKPSKPNFKPKPHNPTTIQSVLQWNRKPQLAG 62

Query: 159 ETPRXXXXXXXXXXXXXXXXXXXXXLSLARLGFSVVAIDAXXXXXXXXXXXXXXXXXNYT 338
           +TPR                     LSLARLGFSVVAIDA                 NYT
Sbjct: 63  DTPRVVVITSGKGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYT 122

Query: 339 AVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALIWLVDALKARQEGSP 518
            VEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLP+GFGGKAL WLVDALKAR+EGSP
Sbjct: 123 VVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALTWLVDALKAREEGSP 182

Query: 519 DFIIIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIKDIKMIVNR 698
           DFI+IDCPAGIDAGFITAI PANEAVLVTTPDITSLRDADRVTGLLECDGIKDIKMIVNR
Sbjct: 183 DFILIDCPAGIDAGFITAIAPANEAVLVTTPDITSLRDADRVTGLLECDGIKDIKMIVNR 242

Query: 699 VRTDMIRGEDMMSVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVLNKPPTLAGLAFEQ 878
           VRTDMI+GEDMMSVLDVQEMLGLALLGVIPED+EVIRSTNRGYPLVLNKPPTLAGLAFEQ
Sbjct: 243 VRTDMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQ 302

Query: 879 AAWRLVEQDSMKAVMVEEEPKKR 947
           AAWRLVEQDSM+AV+VEEEPKKR
Sbjct: 303 AAWRLVEQDSMQAVVVEEEPKKR 325


>ref|XP_002513656.1| Septum site-determining protein minD, putative [Ricinus communis]
           gi|223547564|gb|EEF49059.1| Septum site-determining
           protein minD, putative [Ricinus communis]
          Length = 326

 Score =  443 bits (1139), Expect = e-122
 Identities = 233/312 (74%), Positives = 249/312 (79%)
 Frame = +3

Query: 12  LHTISPNKKNSPFPISTTPKHLIRKSNLKNKPNKTVSVLQWNRKPELSGETPRXXXXXXX 191
           LH+++P K   PF     PK    K +  +  +   SVLQWNRKPEL+GETPR       
Sbjct: 13  LHSLAPFK---PF---VNPKTQTLKPSKSHSHSAVQSVLQWNRKPELAGETPRVVVITSG 66

Query: 192 XXXXXXXXXXXXXXLSLARLGFSVVAIDAXXXXXXXXXXXXXXXXXNYTAVEVLNGDCRL 371
                         LSLARLGFSVVAIDA                 NYT VEV+NGDCRL
Sbjct: 67  KGGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTLVEVMNGDCRL 126

Query: 372 DQALVRDKRWSNFELLCISKPRSKLPLGFGGKALIWLVDALKARQEGSPDFIIIDCPAGI 551
           DQALVRDKRWSNFEL+CISKPRSKLPLGFGGKAL+WLV+ALK R EG PDFIIIDCPAGI
Sbjct: 127 DQALVRDKRWSNFELVCISKPRSKLPLGFGGKALVWLVEALKTRNEGCPDFIIIDCPAGI 186

Query: 552 DAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIKDIKMIVNRVRTDMIRGEDM 731
           DAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGI+DIKMIVNRVRTDMI+GEDM
Sbjct: 187 DAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDM 246

Query: 732 MSVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSM 911
           MSVLDVQEMLGLALLGVIPED+EVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQD+M
Sbjct: 247 MSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDTM 306

Query: 912 KAVMVEEEPKKR 947
           +AVMVEEEPKKR
Sbjct: 307 QAVMVEEEPKKR 318


>ref|XP_004160354.1| PREDICTED: putative septum site-determining protein minD homolog,
           chloroplastic-like [Cucumis sativus]
          Length = 325

 Score =  441 bits (1133), Expect = e-121
 Identities = 225/276 (81%), Positives = 235/276 (85%)
 Frame = +3

Query: 120 SVLQWNRKPELSGETPRXXXXXXXXXXXXXXXXXXXXXLSLARLGFSVVAIDAXXXXXXX 299
           SVLQWNRKPEL+G+TPR                     +SLARLGFSVVAIDA       
Sbjct: 42  SVLQWNRKPELAGDTPRVVVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNL 101

Query: 300 XXXXXXXXXXNYTAVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALIW 479
                     NYT VEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLP+GFGGKAL+W
Sbjct: 102 DLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVW 161

Query: 480 LVDALKARQEGSPDFIIIDCPAGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLE 659
           LVDALKARQEG PDFIIIDCPAGIDAGFITAITPANEA+LVTTPDITSLRDADRVTGLLE
Sbjct: 162 LVDALKARQEGCPDFIIIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLE 221

Query: 660 CDGIKDIKMIVNRVRTDMIRGEDMMSVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVL 839
           CDGI+DIKM+VNRVRTDMI+GEDMMSVLDVQEMLGLALLGVIPED+EVIRSTNRGYPLVL
Sbjct: 222 CDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVL 281

Query: 840 NKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKKR 947
           NKPPTLAGLAFEQAAWRLVEQDSM AVMVEEEPKKR
Sbjct: 282 NKPPTLAGLAFEQAAWRLVEQDSMTAVMVEEEPKKR 317


>ref|NP_197790.1| septum site-determining protein (MIND) [Arabidopsis thaliana]
           gi|75264960|sp|Q9MBA2.1|MIND1_ARATH RecName:
           Full=Putative septum site-determining protein minD
           homolog, chloroplastic; Short=AtMinD1; AltName:
           Full=Protein ACCUMULATION AND REPLICATION OF
           CHLOROPLASTS 11; AltName: Full=Septum site-determining
           protein MinD1; Flags: Precursor
           gi|6759277|dbj|BAA90261.1| MinD [Arabidopsis thaliana]
           gi|9758226|dbj|BAB08725.1| septum site-determining MinD
           [Arabidopsis thaliana] gi|25083076|gb|AAN72038.1| septum
           site-determining MinD [Arabidopsis thaliana]
           gi|31711804|gb|AAP68258.1| At5g24020 [Arabidopsis
           thaliana] gi|332005863|gb|AED93246.1| septum
           site-determining protein (MIND) [Arabidopsis thaliana]
          Length = 326

 Score =  440 bits (1132), Expect = e-121
 Identities = 233/315 (73%), Positives = 248/315 (78%), Gaps = 3/315 (0%)
 Frame = +3

Query: 12  LHTISPNKKNSPFPISTTPKHLIRKSNLKNKPNKTV---SVLQWNRKPELSGETPRXXXX 182
           L   S N ++   P S + K LI      N P++     SVLQ+NRKPEL+GETPR    
Sbjct: 4   LRLFSTNHQSLLLPSSLSQKTLISSPRFVNNPSRRSPIRSVLQFNRKPELAGETPRIVVI 63

Query: 183 XXXXXXXXXXXXXXXXXLSLARLGFSVVAIDAXXXXXXXXXXXXXXXXXNYTAVEVLNGD 362
                            LSLAR GFSVVAIDA                 NYT VEV+NGD
Sbjct: 64  TSGKGGVGKTTTTANVGLSLARYGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVINGD 123

Query: 363 CRLDQALVRDKRWSNFELLCISKPRSKLPLGFGGKALIWLVDALKARQEGSPDFIIIDCP 542
           CRLDQALVRDKRWSNFELLCISKPRSKLP+GFGGKAL WLVDALK R EGSPDFIIIDCP
Sbjct: 124 CRLDQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEWLVDALKTRPEGSPDFIIIDCP 183

Query: 543 AGIDAGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIKDIKMIVNRVRTDMIRG 722
           AGIDAGFITAITPANEAVLVTTPDIT+LRDADRVTGLLECDGI+DIKMIVNRVRTDMI+G
Sbjct: 184 AGIDAGFITAITPANEAVLVTTPDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKG 243

Query: 723 EDMMSVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 902
           EDMMSVLDVQEMLGL+LLGVIPED+EVIRSTNRG+PLVLNKPPTLAGLAFEQAAWRLVEQ
Sbjct: 244 EDMMSVLDVQEMLGLSLLGVIPEDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQ 303

Query: 903 DSMKAVMVEEEPKKR 947
           DSMKAVMVEEEPKKR
Sbjct: 304 DSMKAVMVEEEPKKR 318


>gb|AFC37490.1| MinD protein [Manihot esculenta]
          Length = 328

 Score =  439 bits (1129), Expect = e-121
 Identities = 230/311 (73%), Positives = 246/311 (79%)
 Frame = +3

Query: 15  HTISPNKKNSPFPISTTPKHLIRKSNLKNKPNKTVSVLQWNRKPELSGETPRXXXXXXXX 194
           H++ P K       S  PK    K +  +  +   SVLQWNRKPEL+GETPR        
Sbjct: 17  HSLMPFK-------SFNPKTQTLKYSKSHSHSAVQSVLQWNRKPELAGETPRVVVITSGK 69

Query: 195 XXXXXXXXXXXXXLSLARLGFSVVAIDAXXXXXXXXXXXXXXXXXNYTAVEVLNGDCRLD 374
                        LSLARLGFSVVA+DA                 NYT VEV+NGDCRLD
Sbjct: 70  GGVGKTTTTANVGLSLARLGFSVVAVDADVGLRNLDLLLGLENRVNYTLVEVMNGDCRLD 129

Query: 375 QALVRDKRWSNFELLCISKPRSKLPLGFGGKALIWLVDALKARQEGSPDFIIIDCPAGID 554
           QALVRDKRWS+FELLCISKPRSKLPLGFGGKAL+WLV++LK R EG PDFIIIDCPAGID
Sbjct: 130 QALVRDKRWSDFELLCISKPRSKLPLGFGGKALVWLVESLKTRSEGCPDFIIIDCPAGID 189

Query: 555 AGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIKDIKMIVNRVRTDMIRGEDMM 734
           AGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGI+DIKMIVNRVRTDMI+GEDMM
Sbjct: 190 AGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMM 249

Query: 735 SVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMK 914
           SVLDVQEMLGLALLGVIPED+EVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQD+MK
Sbjct: 250 SVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDTMK 309

Query: 915 AVMVEEEPKKR 947
           AVMVEEEPKKR
Sbjct: 310 AVMVEEEPKKR 320


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