BLASTX nr result

ID: Coptis25_contig00027147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027147
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284237.1| PREDICTED: transcriptional activator Myb [Vi...   207   1e-51
ref|XP_004152727.1| PREDICTED: transcriptional activator Myb-lik...   207   1e-51
ref|XP_004169452.1| PREDICTED: transcriptional activator Myb-lik...   206   2e-51
ref|XP_002327107.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_003603000.1| Myb transcription factor [Medicago truncatul...   205   4e-51

>ref|XP_002284237.1| PREDICTED: transcriptional activator Myb [Vitis vinifera]
          Length = 216

 Score =  207 bits (527), Expect = 1e-51
 Identities = 107/155 (69%), Positives = 117/155 (75%)
 Frame = +2

Query: 104 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 283
           K++RIKG WSAEEDR LT LV  +GARNW+LISR I GRSGKSCRLRWCNQLSPSVEHRP
Sbjct: 30  KSERIKGSWSAEEDRVLTRLVERYGARNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRP 89

Query: 284 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKESSTSCGDV 463
           FS +EDDTILAAH RYGNRWATIA+LLPGRTDNAVKNHWNSTLKK+  E  +S    G  
Sbjct: 90  FSAAEDDTILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKKRQRE--QSQQMEGPS 147

Query: 464 NNGYSEDMNKLGVGLSLSSTFEYDPNTTLTLAPPG 568
            +G   DM             E DP TTL+LAPPG
Sbjct: 148 GSGSYPDM-------------EPDPITTLSLAPPG 169


>ref|XP_004152727.1| PREDICTED: transcriptional activator Myb-like [Cucumis sativus]
          Length = 242

 Score =  207 bits (526), Expect = 1e-51
 Identities = 102/168 (60%), Positives = 127/168 (75%), Gaps = 12/168 (7%)
 Frame = +2

Query: 104 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 283
           + ++IKGPWSAEEDR LT+LV  +GARNW+LISR I GRSGKSCRLRWCNQLSP+VEHRP
Sbjct: 28  RPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRP 87

Query: 284 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKES------- 442
           FS +ED+TILAAH R+GNRWATIA+LLPGRTDNAVKNHWNSTLK++  E +         
Sbjct: 88  FSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQHHQQLVMDG 147

Query: 443 -STSCGDVNNGYSEDM----NKLGVGLSLSSTFEYDPNTTLTLAPPGL 571
            +  C  ++N  + ++    + L + +S+S   E DP T LTLAPPG+
Sbjct: 148 ITPECHGISNNNNNNVVNIASDLKLSVSVSVPLEDDPLTALTLAPPGI 195


>ref|XP_004169452.1| PREDICTED: transcriptional activator Myb-like [Cucumis sativus]
          Length = 242

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/168 (60%), Positives = 126/168 (75%), Gaps = 12/168 (7%)
 Frame = +2

Query: 104 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 283
           + ++IKGPWSAEEDR LT+LV  +GARNW+LISR I GRSGKSCRLRWCNQLSP+VEHRP
Sbjct: 28  RPEKIKGPWSAEEDRILTQLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRP 87

Query: 284 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKES------- 442
           FS +ED+TILAAH R+GNRWATIA+LLPGRTDNAVKNHWNSTLK++  E +         
Sbjct: 88  FSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQHHQQLVMDG 147

Query: 443 -STSCGDVNNGYSED----MNKLGVGLSLSSTFEYDPNTTLTLAPPGL 571
            +  C  ++N  + +     + L + +S+S   E DP T LTLAPPG+
Sbjct: 148 ITPECHGISNNNNNNAVNIASDLKLSVSVSVPLEDDPLTALTLAPPGI 195


>ref|XP_002327107.1| predicted protein [Populus trichocarpa] gi|222835422|gb|EEE73857.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/165 (61%), Positives = 125/165 (75%), Gaps = 9/165 (5%)
 Frame = +2

Query: 104 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 283
           K++RIKGPWSAEEDR LT LV  HG RNW+LISR I GRSGKSCRLRWCNQLSP+V+HRP
Sbjct: 32  KSERIKGPWSAEEDRILTRLVEQHGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVQHRP 91

Query: 284 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKESSTSCGDV 463
           FS  ED+TILAAH R+GNRWATIA+LLPGRTDNAVKNHWNSTLK++  E +      G+ 
Sbjct: 92  FSPVEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRARERQSQMNLEGNF 151

Query: 464 NNGYSEDMNK-LGVGLSLSS--------TFEYDPNTTLTLAPPGL 571
           ++ Y  + N+ + + ++++S          E D  TTLTLAPPG+
Sbjct: 152 DSNYGNNNNEGIAIDINVASGSMPDGIMREEEDALTTLTLAPPGI 196


>ref|XP_003603000.1| Myb transcription factor [Medicago truncatula]
           gi|355492048|gb|AES73251.1| Myb transcription factor
           [Medicago truncatula] gi|388499774|gb|AFK37953.1|
           unknown [Medicago truncatula]
          Length = 226

 Score =  205 bits (522), Expect = 4e-51
 Identities = 107/164 (65%), Positives = 117/164 (71%), Gaps = 3/164 (1%)
 Frame = +2

Query: 104 KTDRIKGPWSAEEDRTLTELVGLHGARNWTLISRSIPGRSGKSCRLRWCNQLSPSVEHRP 283
           K DRIKGPWSAEEDR LT LV  HGARNW+LISR I GRSGKSCRLRWCNQLSP+VEHRP
Sbjct: 32  KLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRP 91

Query: 284 FSQSEDDTILAAHLRYGNRWATIAKLLPGRTDNAVKNHWNSTLKKKHIEGKESSTSCG-- 457
           FS  ED+TI+AAH +YGNRWATIA+LLPGRTDNAVKNHWNSTLK++          CG  
Sbjct: 92  FSSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRR--------AGCGGS 143

Query: 458 -DVNNGYSEDMNKLGVGLSLSSTFEYDPNTTLTLAPPGLSCERR 586
             V  G +E       G   +   E DP T LTLAPPG   E R
Sbjct: 144 VTVAGGGNE-------GGQFTFPLEDDPLTALTLAPPGNGVEDR 180


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