BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027146
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610255.1| F-box/LRR-repeat protein [Medicago truncatul...    58   2e-06
ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   9e-06

>ref|XP_003610255.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355511310|gb|AES92452.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/154 (29%), Positives = 69/154 (44%)
 Frame = -2

Query: 651 LAVTNVTISTLSRFENFHATLPIFQNLIHFELSTEVALGDTRLLMALLKNSPNVEHLLFE 472
           L +TN TI   S   N    LP F NL   ++          LL+ +L+ +P +E L   
Sbjct: 242 LKLTNNTIERFSYPRNCGHLLPSFNNLTKLDMILGYFYVSCELLVDILRKTPKLEVLHIS 301

Query: 471 KDIFPKFHIDGDRVMPQSVPTSFPLRLKSVTFDEFGASKIELFLVKNLLENAMALERMTI 292
           K       +D + +   S+P      LK  +F +F   +IE+ L+K L ENA  LE + I
Sbjct: 302 KGDCTA--LDNEDLTSDSLPCCIKSSLKLCSFSDFDGDEIEIQLLKCLTENATVLEAINI 359

Query: 291 FSSEKFAEAREKQVMLWNYLSKARKGSKCCLIDF 190
           F S   +   +K   + N++     GS  C+  F
Sbjct: 360 FCSGGLSSNLKKLTDVRNHVQSLGLGS--CVFKF 391


>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
 Frame = -2

Query: 591 LPIFQNLIHFELSTEVALGDTRL--LMALLKNSPNVEHLLFEKDIFPKFHIDGDRVMPQS 418
           LP+F++LIH ELS    +   R   L+ +LK+SP +++L  + +   +  ID     P  
Sbjct: 257 LPMFESLIHLELSLNFKIWYPRWEWLLGMLKHSPKLQNLTIQDNKAIEEAIDECWKDPPI 316

Query: 417 VPTSFPLRLKSVTFDEFGASKIELFLVKNLLENAMALERMTIFSSEKFAEAREKQVMLWN 238
           VP     +LK+     +  +K +L   K ++EN+  LE MTI S+       + Q+++  
Sbjct: 317 VPECLSSQLKTCHIRVYKGTKYDLEFTKYIMENSKVLETMTINSTRSLDMNVKYQLLM-- 374

Query: 237 YLSKARKGSKCCLIDF 190
            LS   +GS  C + F
Sbjct: 375 KLSSYTRGSTTCKLLF 390