BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027137
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26110.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote...    87   1e-15
gb|ABF69992.1| double-stranded RNA-binding (DsRBD) domain-contai...    85   1e-15
ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c...    86   2e-15
gb|AFJ79551.1| double stranded RNA binding protein 3 [Oryza sati...    83   3e-14

>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = +2

Query: 74  DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253
           DETG  Y NLLQETAHR GL+LP+YT VR  P H PVF  TV+IA+ SFTG+PA TKKQA
Sbjct: 83  DETG-VYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFFCTVDIAKMSFTGEPAKTKKQA 141

Query: 254 QK 259
           QK
Sbjct: 142 QK 143


>ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
           vinifera]
          Length = 563

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = +2

Query: 74  DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253
           DETG  Y NLLQETAHR GL+LP+YT VR  P H PVF  TV+IA+ SFTG+PA TKKQA
Sbjct: 83  DETG-VYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFFCTVDIAKMSFTGEPAKTKKQA 141

Query: 254 QK 259
           QK
Sbjct: 142 QK 143


>gb|ABF69992.1| double-stranded RNA-binding (DsRBD) domain-containing protein [Musa
           acuminata]
          Length = 610

 Score = 85.1 bits (209), Expect(2) = 1e-15
 Identities = 43/62 (69%), Positives = 47/62 (75%)
 Frame = +2

Query: 74  DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253
           DETG  Y NLLQETAHR GL+LP+YT VR  P H P+F  TVE+A  SFTG PA TKKQA
Sbjct: 83  DETGI-YKNLLQETAHRAGLKLPVYTTVRSGPGHTPIFTCTVELAGMSFTGDPAKTKKQA 141

Query: 254 QK 259
           QK
Sbjct: 142 QK 143



 Score = 22.3 bits (46), Expect(2) = 1e-15
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 232 SKHQEASSKNTSMAAWS 282
           +K ++ + KN +MAAWS
Sbjct: 135 AKTKKQAQKNAAMAAWS 151


>ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis]
           gi|223548237|gb|EEF49728.1| hypothetical protein
           RCOM_1429110 [Ricinus communis]
          Length = 568

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/62 (70%), Positives = 48/62 (77%)
 Frame = +2

Query: 74  DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253
           DETG  Y NLLQETAHR GL+LP+YT VR  P H PVF  TVE+A  SFTG+PA TKKQA
Sbjct: 83  DETG-VYKNLLQETAHRAGLKLPVYTTVRSGPGHVPVFSCTVELAGMSFTGEPARTKKQA 141

Query: 254 QK 259
           QK
Sbjct: 142 QK 143


>gb|AFJ79551.1| double stranded RNA binding protein 3 [Oryza sativa Indica Group]
          Length = 593

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/62 (66%), Positives = 46/62 (74%)
 Frame = +2

Query: 74  DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253
           DETG  Y NLLQETAHR GL+LP+YT +R  P H PVF  TVE+A  +FTG P  TKKQA
Sbjct: 83  DETGI-YKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFTCTVELAGMTFTGNPGKTKKQA 141

Query: 254 QK 259
           QK
Sbjct: 142 QK 143