BLASTX nr result
ID: Coptis25_contig00027137
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027137 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26110.3| unnamed protein product [Vitis vinifera] 87 1e-15 ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote... 87 1e-15 gb|ABF69992.1| double-stranded RNA-binding (DsRBD) domain-contai... 85 1e-15 ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c... 86 2e-15 gb|AFJ79551.1| double stranded RNA binding protein 3 [Oryza sati... 83 3e-14 >emb|CBI26110.3| unnamed protein product [Vitis vinifera] Length = 826 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/62 (70%), Positives = 49/62 (79%) Frame = +2 Query: 74 DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253 DETG Y NLLQETAHR GL+LP+YT VR P H PVF TV+IA+ SFTG+PA TKKQA Sbjct: 83 DETG-VYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFFCTVDIAKMSFTGEPAKTKKQA 141 Query: 254 QK 259 QK Sbjct: 142 QK 143 >ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis vinifera] Length = 563 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/62 (70%), Positives = 49/62 (79%) Frame = +2 Query: 74 DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253 DETG Y NLLQETAHR GL+LP+YT VR P H PVF TV+IA+ SFTG+PA TKKQA Sbjct: 83 DETG-VYKNLLQETAHRAGLKLPVYTTVRSGPGHIPVFFCTVDIAKMSFTGEPAKTKKQA 141 Query: 254 QK 259 QK Sbjct: 142 QK 143 >gb|ABF69992.1| double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] Length = 610 Score = 85.1 bits (209), Expect(2) = 1e-15 Identities = 43/62 (69%), Positives = 47/62 (75%) Frame = +2 Query: 74 DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253 DETG Y NLLQETAHR GL+LP+YT VR P H P+F TVE+A SFTG PA TKKQA Sbjct: 83 DETGI-YKNLLQETAHRAGLKLPVYTTVRSGPGHTPIFTCTVELAGMSFTGDPAKTKKQA 141 Query: 254 QK 259 QK Sbjct: 142 QK 143 Score = 22.3 bits (46), Expect(2) = 1e-15 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = +1 Query: 232 SKHQEASSKNTSMAAWS 282 +K ++ + KN +MAAWS Sbjct: 135 AKTKKQAQKNAAMAAWS 151 >ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis] gi|223548237|gb|EEF49728.1| hypothetical protein RCOM_1429110 [Ricinus communis] Length = 568 Score = 86.3 bits (212), Expect = 2e-15 Identities = 44/62 (70%), Positives = 48/62 (77%) Frame = +2 Query: 74 DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253 DETG Y NLLQETAHR GL+LP+YT VR P H PVF TVE+A SFTG+PA TKKQA Sbjct: 83 DETG-VYKNLLQETAHRAGLKLPVYTTVRSGPGHVPVFSCTVELAGMSFTGEPARTKKQA 141 Query: 254 QK 259 QK Sbjct: 142 QK 143 >gb|AFJ79551.1| double stranded RNA binding protein 3 [Oryza sativa Indica Group] Length = 593 Score = 82.8 bits (203), Expect = 3e-14 Identities = 41/62 (66%), Positives = 46/62 (74%) Frame = +2 Query: 74 DETGFTYTNLLQETAHRDGLRLPIYTIVRPEPSHEPVFH*TVEIARWSFTGKPANTKKQA 253 DETG Y NLLQETAHR GL+LP+YT +R P H PVF TVE+A +FTG P TKKQA Sbjct: 83 DETGI-YKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFTCTVELAGMTFTGNPGKTKKQA 141 Query: 254 QK 259 QK Sbjct: 142 QK 143