BLASTX nr result

ID: Coptis25_contig00027121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027121
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853...   231   5e-59
ref|XP_003633498.1| PREDICTED: uncharacterized protein LOC100855...   224   8e-57
gb|ABF96552.1| transposon protein, putative, CACTA, En/Spm sub-c...   213   1e-53
gb|AAR06309.1| hypothetical protein [Oryza sativa Japonica Group]     213   1e-53
gb|ABB83644.1| PIF-like transposase [Daucus carota]                   207   1e-51

>ref|XP_003631787.1| PREDICTED: uncharacterized protein LOC100853519 [Vitis vinifera]
          Length = 414

 Score =  231 bits (590), Expect = 5e-59
 Identities = 110/189 (58%), Positives = 133/189 (70%)
 Frame = +2

Query: 2   NCIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSR 181
           +CIGAIDGTHI   VP+ + Q  +RGRK + TQNVMC C+FDM FTFV AGWEG+AND+R
Sbjct: 175 DCIGAIDGTHISAWVPADR-QTSFRGRKTVITQNVMCACNFDMMFTFVYAGWEGTANDAR 233

Query: 182 ILQETIEDPQLNFPRPLHGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSPKTAKE 361
           +  + +  P++NFP P  GKYYVVDSGY    GFL PYRG+RYHL EY G    P   KE
Sbjct: 234 VFLDALTRPEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQEYWGRHNQPIRYKE 293

Query: 362 QFNFAHASLRNIIERCFGVLKCRFQVLELMPSYNLRKQRNIVIASCALHNFIRKHALKDD 541
            FN+ H+SLRNIIERCFGVLK RF +L +MP Y   +Q +IV+A C LHN+IR     D 
Sbjct: 294 LFNYRHSSLRNIIERCFGVLKTRFPILRMMPCYKPSRQPSIVVACCTLHNWIRLSTRNDQ 353

Query: 542 FFETFEKED 568
            F  +E ED
Sbjct: 354 LFREYEVED 362


>ref|XP_003633498.1| PREDICTED: uncharacterized protein LOC100855100 [Vitis vinifera]
          Length = 409

 Score =  224 bits (571), Expect = 8e-57
 Identities = 106/189 (56%), Positives = 130/189 (68%)
 Frame = +2

Query: 2   NCIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSR 181
           +CI AI+GTHI   VP+ + Q  +RGRK + TQNVMC C+FDM FTFV AGWEG+ ND+R
Sbjct: 175 DCISAINGTHISAWVPADR-QTSFRGRKTVITQNVMCACNFDMMFTFVYAGWEGTTNDAR 233

Query: 182 ILQETIEDPQLNFPRPLHGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSPKTAKE 361
           +  + +  P++NFP P  GKYYVVDSGY    GFL PYRG+RYHL EY G    P   KE
Sbjct: 234 VFLDALTRPEVNFPWPSEGKYYVVDSGYPCISGFLPPYRGERYHLQEYRGRRNQPIRYKE 293

Query: 362 QFNFAHASLRNIIERCFGVLKCRFQVLELMPSYNLRKQRNIVIASCALHNFIRKHALKDD 541
            FN+ H+SLRNIIERCFGVLK RF +  +MP Y   +Q +IV+A C LHN+IR     D 
Sbjct: 294 LFNYRHSSLRNIIERCFGVLKTRFPISRMMPCYKPSRQPSIVVACCTLHNWIRLSTRNDQ 353

Query: 542 FFETFEKED 568
            F  +E ED
Sbjct: 354 LFREYEVED 362


>gb|ABF96552.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 798

 Score =  213 bits (543), Expect = 1e-53
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = +2

Query: 2    NCIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSR 181
            +CIGAIDGTH+P  VPS K+ + +   KG+ TQNVM VCDFDM FTFVLAGW GS +D R
Sbjct: 573  DCIGAIDGTHVPCVVPSNKL-VQHLCCKGMTTQNVMVVCDFDMRFTFVLAGWPGSVHDMR 631

Query: 182  ILQETIEDPQLNFPRPLHGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSPKTAKE 361
            +  +        FP    GKYY+VDSGY N PG+LAPY+G +YHL EY      P+  +E
Sbjct: 632  VFDDAHTTYTHVFPHSPTGKYYLVDSGYPNRPGYLAPYKGTKYHLQEYR-DAPEPQGKEE 690

Query: 362  QFNFAHASLRNIIERCFGVLKCRFQVLELMPSYNLRKQRNIVIASCALHNFIRKHALKDD 541
             FN+AH+SLRN+IER FGVLK ++++LE +PSY+ RKQ  I+IA CALHNFIRK  ++D 
Sbjct: 691  NFNYAHSSLRNVIERSFGVLKMKWRMLEKIPSYDPRKQTQIIIACCALHNFIRKSGIRDK 750

Query: 542  FFETFEKED 568
             F+  ++++
Sbjct: 751  HFDRCDRDE 759


>gb|AAR06309.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 767

 Score =  213 bits (543), Expect = 1e-53
 Identities = 103/189 (54%), Positives = 135/189 (71%)
 Frame = +2

Query: 2    NCIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSR 181
            +CIGAIDGTH+P  VPS K+ + +   KG+ TQNVM VCDFDM FTFVLAGW GS +D R
Sbjct: 542  DCIGAIDGTHVPCVVPSNKL-VQHLCCKGMTTQNVMVVCDFDMRFTFVLAGWPGSVHDMR 600

Query: 182  ILQETIEDPQLNFPRPLHGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSPKTAKE 361
            +  +        FP    GKYY+VDSGY N PG+LAPY+G +YHL EY      P+  +E
Sbjct: 601  VFDDAHTTYTHVFPHSPTGKYYLVDSGYPNRPGYLAPYKGTKYHLQEYR-DAPEPQGKEE 659

Query: 362  QFNFAHASLRNIIERCFGVLKCRFQVLELMPSYNLRKQRNIVIASCALHNFIRKHALKDD 541
             FN+AH+SLRN+IER FGVLK ++++LE +PSY+ RKQ  I+IA CALHNFIRK  ++D 
Sbjct: 660  NFNYAHSSLRNVIERSFGVLKMKWRMLEKIPSYDPRKQTQIIIACCALHNFIRKSGIRDK 719

Query: 542  FFETFEKED 568
             F+  ++++
Sbjct: 720  HFDRCDRDE 728


>gb|ABB83644.1| PIF-like transposase [Daucus carota]
          Length = 425

 Score =  207 bits (527), Expect = 1e-51
 Identities = 100/182 (54%), Positives = 130/182 (71%)
 Frame = +2

Query: 2   NCIGAIDGTHIPIAVPSGKVQIPYRGRKGIPTQNVMCVCDFDMCFTFVLAGWEGSANDSR 181
           +CIGAIDGTH+   VP    Q+ + GRK +PTQNVM VC FDM FTFVLAGWEG+A+D+R
Sbjct: 198 DCIGAIDGTHVHACVPVND-QVRFIGRKNLPTQNVMAVCSFDMRFTFVLAGWEGTAHDTR 256

Query: 182 ILQETIEDPQLNFPRPLHGKYYVVDSGYANAPGFLAPYRGQRYHLNEYSGHGRSPKTAKE 361
           I    +  P LNFP P   KYY+VD+GY    G+L PY+G RYHL ++   G++P+  +E
Sbjct: 257 IFNAAVNTPHLNFPSPPQNKYYLVDAGYPQTLGYLGPYKGVRYHLPDFR-RGQAPEGYQE 315

Query: 362 QFNFAHASLRNIIERCFGVLKCRFQVLELMPSYNLRKQRNIVIASCALHNFIRKHALKDD 541
            FN AH+SLR+ IER FGV K R+++L  MP Y+ R QR+IV+AS ALHN+IR  ++KD 
Sbjct: 316 IFNKAHSSLRSCIERTFGVWKKRWKILAYMPQYSFRSQRDIVVASMALHNYIRLSSIKDT 375

Query: 542 FF 547
            F
Sbjct: 376 IF 377


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