BLASTX nr result

ID: Coptis25_contig00027119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027119
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283851.1| PREDICTED: UPF0082 protein At2g25830 [Vitis ...   285   1e-74
ref|XP_003603612.1| hypothetical protein MTR_3g109620 [Medicago ...   254   2e-73
ref|XP_002516504.1| conserved hypothetical protein [Ricinus comm...   278   2e-72
ref|XP_002880709.1| hypothetical protein ARALYDRAFT_320374 [Arab...   273   6e-71
gb|AAL07079.1| unknown protein [Arabidopsis thaliana] gi|2128120...   270   4e-70

>ref|XP_002283851.1| PREDICTED: UPF0082 protein At2g25830 [Vitis vinifera]
           gi|296081846|emb|CBI20851.3| unnamed protein product
           [Vitis vinifera]
          Length = 319

 Score =  285 bits (730), Expect = 1e-74
 Identities = 155/229 (67%), Positives = 168/229 (73%)
 Frame = +1

Query: 190 AKLERK*SQRKFIRVKRGGPNTLSNTALATVIERAKELDVPKEIVDRNIKRASEKGQEAY 369
           AKL  K  +     VKR GPN  SNT LA V+E+AKELDVPKEIV+RNIKRASEKGQEAY
Sbjct: 91  AKLYSKIGKEVVSAVKRDGPNPKSNTILAAVLEKAKELDVPKEIVERNIKRASEKGQEAY 150

Query: 370 IEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKDCGGKMADPGSIMXXXXXXXXXXX 549
           IEKFYEVYGFGG  MI+EVLTDK+NRSVAAVREV+KDCGGKMADPGS+M           
Sbjct: 151 IEKFYEVYGFGGVSMIIEVLTDKINRSVAAVREVMKDCGGKMADPGSVMFKFRRARVVNV 210

Query: 550 XXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVSSAENYTAILTKLREE 729
                   QLL IALD GAEDVI                  KIV+SAENY+AIL KLREE
Sbjct: 211 KASEADKDQLLTIALDTGAEDVIEPPVYEDDAEEDRSESYYKIVTSAENYSAILEKLREE 270

Query: 730 EIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLELNDVDAVYTDQK 876
            I FE DNG E+LP+TTIEVDDEAMDLNKELMSKLLEL+DVDAVY DQK
Sbjct: 271 GINFETDNGFEMLPITTIEVDDEAMDLNKELMSKLLELDDVDAVYMDQK 319


>ref|XP_003603612.1| hypothetical protein MTR_3g109620 [Medicago truncatula]
           gi|355492660|gb|AES73863.1| hypothetical protein
           MTR_3g109620 [Medicago truncatula]
          Length = 346

 Score =  254 bits (648), Expect(2) = 2e-73
 Identities = 140/240 (58%), Positives = 160/240 (66%), Gaps = 25/240 (10%)
 Frame = +1

Query: 232 VKRGGPNTLSNTALATVIERAKELDVPKEIVDRNIKRASEKGQEAYIEKFYE-------- 387
           VK+GGPN  SN+ALA V+E+ KELDVPK+IV+RNIK+A+EKGQE YIEK YE        
Sbjct: 107 VKKGGPNVTSNSALAAVLEKVKELDVPKDIVERNIKKATEKGQEDYIEKIYEGNQLCLVN 166

Query: 388 -----------------VYGFGGAGMIVEVLTDKVNRSVAAVREVVKDCGGKMADPGSIM 516
                            VYG+GG  M+VEV TDK+ RSVA +REV+KD GGKMAD GS++
Sbjct: 167 VLGYKIGYGTGPATPEWVYGYGGVSMVVEVSTDKITRSVAKIREVIKDYGGKMADSGSVL 226

Query: 517 XXXXXXXXXXXXXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVSSAEN 696
                               LLGIALDAGAEDVI                  KIV S+EN
Sbjct: 227 FKFRRARVVSIKVTNADKDHLLGIALDAGAEDVIDPPTYEDDTEEDRSERYYKIVGSSEN 286

Query: 697 YTAILTKLREEEIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLELNDVDAVYTDQK 876
           Y++IL+KLREE I FEPDNGSELLP TTIEVDDEAMDLNKELMSKLLEL+DVDAVYTDQK
Sbjct: 287 YSSILSKLREEGIEFEPDNGSELLPNTTIEVDDEAMDLNKELMSKLLELDDVDAVYTDQK 346



 Score = 49.7 bits (117), Expect(2) = 2e-73
 Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +3

Query: 48  FEMKYNNTNNMTSVRR--IWTCSPLCMGRRSSKIXXXXXXXXXXXXXXYCKIGKEIVSA 218
           F   +N+ N    VRR  IWT +PLCMGRRS KI              Y +IGKE+VSA
Sbjct: 48  FTNYHNDNNRRVRVRRRTIWTSTPLCMGRRSCKIAGRKEANNAKKMKLYSRIGKEVVSA 106


>ref|XP_002516504.1| conserved hypothetical protein [Ricinus communis]
           gi|223544324|gb|EEF45845.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 311

 Score =  278 bits (711), Expect = 2e-72
 Identities = 148/229 (64%), Positives = 170/229 (74%)
 Frame = +1

Query: 190 AKLERK*SQRKFIRVKRGGPNTLSNTALATVIERAKELDVPKEIVDRNIKRASEKGQEAY 369
           AKL  +  +     VK+GGP+ +SNT LA ++E+AKELDVPK+I++RNIKRAS+KGQEAY
Sbjct: 83  AKLYSRIGKEVVSAVKKGGPSPISNTVLAALLEKAKELDVPKDILERNIKRASDKGQEAY 142

Query: 370 IEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKDCGGKMADPGSIMXXXXXXXXXXX 549
           IEK YEVYGFGG  ++VEVLTDK+NRSVAAVREVVKD GGKMADPGS+M           
Sbjct: 143 IEKIYEVYGFGGVSIVVEVLTDKINRSVAAVREVVKDYGGKMADPGSVMFKFKRVRVVNI 202

Query: 550 XXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVSSAENYTAILTKLREE 729
                   QLL IALDAGAEDVI                  K+VSS+ENY  IL+KLREE
Sbjct: 203 KVTEADKDQLLAIALDAGAEDVIEPPIYEDDADEDKSESYYKVVSSSENYMEILSKLREE 262

Query: 730 EIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLELNDVDAVYTDQK 876
            I FE DNGSELLP+TTIEVDDEAMDLNKEL+SKLLEL+DVDAVYTDQK
Sbjct: 263 GIDFETDNGSELLPITTIEVDDEAMDLNKELISKLLELDDVDAVYTDQK 311


>ref|XP_002880709.1| hypothetical protein ARALYDRAFT_320374 [Arabidopsis lyrata subsp.
           lyrata] gi|297326548|gb|EFH56968.1| hypothetical protein
           ARALYDRAFT_320374 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score =  273 bits (698), Expect = 6e-71
 Identities = 143/229 (62%), Positives = 169/229 (73%)
 Frame = +1

Query: 190 AKLERK*SQRKFIRVKRGGPNTLSNTALATVIERAKELDVPKEIVDRNIKRASEKGQEAY 369
           AKL  +  +     VK+GGPN +SNT LAT++++AKELDVPK+IV+RNIKRASEKGQEA+
Sbjct: 99  AKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAF 158

Query: 370 IEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKDCGGKMADPGSIMXXXXXXXXXXX 549
           IEK YEVYG+GG  M+VEVLTDK+NRSVAA+R VVKD GGKMAD GS+M           
Sbjct: 159 IEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFRRVRVVNI 218

Query: 550 XXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVSSAENYTAILTKLREE 729
                   QLL IALDAGAEDVI                  KIV+S+ENY+ IL+KLR+E
Sbjct: 219 KVTEADKDQLLNIALDAGAEDVIEPPTYEDDTDEDREERYYKIVTSSENYSTILSKLRDE 278

Query: 730 EIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLELNDVDAVYTDQK 876
            + FEPDNGSELLP+TT+EVDDEAM+LNKELM KLLEL+DVDAVY DQK
Sbjct: 279 GVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKLLELDDVDAVYIDQK 327


>gb|AAL07079.1| unknown protein [Arabidopsis thaliana] gi|21281203|gb|AAM45134.1|
           unknown protein [Arabidopsis thaliana]
          Length = 330

 Score =  270 bits (691), Expect = 4e-70
 Identities = 143/229 (62%), Positives = 168/229 (73%)
 Frame = +1

Query: 190 AKLERK*SQRKFIRVKRGGPNTLSNTALATVIERAKELDVPKEIVDRNIKRASEKGQEAY 369
           AKL  +  +     VK+GGPN +SNT LAT++++AKELDVPK+IV+RNIKRASEKGQEA+
Sbjct: 102 AKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAF 161

Query: 370 IEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKDCGGKMADPGSIMXXXXXXXXXXX 549
           IEK YEVYG+GG  M+VEVLTDK+NRSVAA+R VVKD GGKMAD GS+M           
Sbjct: 162 IEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFKRVRVVNI 221

Query: 550 XXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXXXXXXKIVSSAENYTAILTKLREE 729
                   QLL IALDAGAEDVI                  KIV+S ENY+ IL+KLR+E
Sbjct: 222 KVTEADKDQLLIIALDAGAEDVIEPPTYEDDTDEDREERYYKIVTSNENYSTILSKLRDE 281

Query: 730 EIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLELNDVDAVYTDQK 876
            + FEPDNGSELLP+TT+EVDDEAM+LNKELM KLLEL+DVDAVY DQK
Sbjct: 282 GVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKLLELDDVDAVYIDQK 330


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