BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027115
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   112   3e-23
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              112   3e-23
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   108   5e-22
ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...    98   1e-18
sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-prote...    88   1e-15

>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score =  112 bits (281), Expect = 3e-23
 Identities = 79/185 (42%), Positives = 101/185 (54%), Gaps = 5/185 (2%)
 Frame = -1

Query: 568 VSRSIPDFVKFGPILPKSAGFSPFLN-KGDEKDCCRPNTIPSPIEELEESAKWSPKMCSP 392
           VSRSIPD+VKFGPILPKSAGFS  L  K + ++ CR N      + LEES  W  +  + 
Sbjct: 278 VSRSIPDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVMWDLQEETI 337

Query: 391 EENERNFGSEYRDDD--KESEAKTLK-APPNNMKMNEGVGSRTKVKQSDKKDRIHSPPLF 221
           EENE N  S+Y  D    +SE KT +    ++MKMN       KV+    + ++ S   F
Sbjct: 338 EENEDN--SDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSF 395

Query: 220 SPPIVXXXXXXXXXXXXSLQCRRDSEPLLRLLSER-ITTTVSASLPVTPQLLNDSSISPA 44
           S                   C +    +LRLLS R + +TVS SLPV+P+L  DSSIS A
Sbjct: 396 SSTDSPKTSLKISSPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSA 455

Query: 43  DSDGE 29
           DSDGE
Sbjct: 456 DSDGE 460


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  112 bits (281), Expect = 3e-23
 Identities = 79/185 (42%), Positives = 101/185 (54%), Gaps = 5/185 (2%)
 Frame = -1

Query: 568 VSRSIPDFVKFGPILPKSAGFSPFLN-KGDEKDCCRPNTIPSPIEELEESAKWSPKMCSP 392
           VSRSIPD+VKFGPILPKSAGFS  L  K + ++ CR N      + LEES  W  +  + 
Sbjct: 294 VSRSIPDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVMWDLQEETI 353

Query: 391 EENERNFGSEYRDDD--KESEAKTLK-APPNNMKMNEGVGSRTKVKQSDKKDRIHSPPLF 221
           EENE N  S+Y  D    +SE KT +    ++MKMN       KV+    + ++ S   F
Sbjct: 354 EENEDN--SDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSF 411

Query: 220 SPPIVXXXXXXXXXXXXSLQCRRDSEPLLRLLSER-ITTTVSASLPVTPQLLNDSSISPA 44
           S                   C +    +LRLLS R + +TVS SLPV+P+L  DSSIS A
Sbjct: 412 SSTDSPKTSLKISSPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSA 471

Query: 43  DSDGE 29
           DSDGE
Sbjct: 472 DSDGE 476


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  108 bits (271), Expect = 5e-22
 Identities = 78/185 (42%), Positives = 100/185 (54%), Gaps = 5/185 (2%)
 Frame = -1

Query: 568 VSRSIPDFVKFGPILPKSAGFSPFLN-KGDEKDCCRPNTIPSPIEELEESAKWSPKMCSP 392
           VSRSIPD+VKFGPILPKSAGFS  L  K + ++ CR N      + LEES  W  +  + 
Sbjct: 278 VSRSIPDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVMWDLQEETI 337

Query: 391 EENERNFGSEYRDDD--KESEAKTLK-APPNNMKMNEGVGSRTKVKQSDKKDRIHSPPLF 221
           EENE N  S+Y  D    +SE KT +    ++MKMN       KV+    + ++ S   F
Sbjct: 338 EENEDN--SDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQLPSSTSF 395

Query: 220 SPPIVXXXXXXXXXXXXSLQCRRDSEPLLRLLSER-ITTTVSASLPVTPQLLNDSSISPA 44
           S                     +    +LRLLS R + +TVS SLPV+P+L  DSSIS A
Sbjct: 396 SSTDSPKTSLKISSPKSDSHXHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKDSSISSA 455

Query: 43  DSDGE 29
           DSDGE
Sbjct: 456 DSDGE 460


>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
           gi|223551243|gb|EEF52729.1| hypothetical protein
           RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
 Frame = -1

Query: 568 VSRSIPDFVKFGPILPKSAGFSPFL-NKGDEKDCCRPNTIPSPIEELEESAKWSPKMCSP 392
           VSRSIPD+VKFGPILPKSAGFSP + +K   ++  R +  PS    LEES  W  +    
Sbjct: 278 VSRSIPDYVKFGPILPKSAGFSPVVRSKYGAREAGRLSASPSLSHNLEESTVWDTQESIL 337

Query: 391 EENERNFGSEYRDDDKESEAKTLKAPPNNMKMNEGVGSRTKVKQSDKKDRIHSPPLFSPP 212
            ENE +   +  + D E ++  L     + KM E +     +K S    R HSP +FS  
Sbjct: 338 NENEDHSDPDNGNLDSEDKSHKL-VTLRSTKMIE-IKEMGTIKPSKSSSRSHSPTIFSSM 395

Query: 211 IVXXXXXXXXXXXXSLQCRRDSEPLLRLLSERITTTVSA-SLPVTPQLLNDSSISPADSD 35
                             + +S  L R LS ++  + +A SLPV+P ++ND SIS  DSD
Sbjct: 396 DSPSTFWPKVSANSDAHSKTESTSLSRHLSSQVMDSTNAPSLPVSPSIINDYSISSRDSD 455

Query: 34  GE 29
           G+
Sbjct: 456 GQ 457


>sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1; AltName:
           Full=Protein cerberus
          Length = 1485

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 70/180 (38%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
 Frame = -1

Query: 568 VSRSIPDFVKFGPILPKSAGFSPFLNKGDE-KDCCRPNTIPSPIEELEESAKWSPKMCSP 392
           +SR+IPDFVKFGPILPKSAGFS      D   +  R N   S ++E E+ + W  K    
Sbjct: 278 LSRTIPDFVKFGPILPKSAGFSLAPRSKDVLNETIRENVTSSNLKE-EKLSIWGAKDTII 336

Query: 391 EENERNFGSEYRDDDKESEAKTLKAPPNNMKMNEGVGSRTKVKQSDKKDRIHSPPLFSPP 212
           EENE +  SE  ++  +S+ K     P  MKM +  G  TKV  S ++++I SP +FSP 
Sbjct: 337 EENEDDSDSELENESVDSDDKNNIFSP-GMKMMKYEGVETKVDLSCQRNQIPSPDIFSPL 395

Query: 211 IVXXXXXXXXXXXXSLQCRRDSEPLLRLLSERI-TTTVSASLPVTPQLLNDSSISPADSD 35
                          +  +RDS+  LRL S RI   T+S SL  +P +  D +IS AD++
Sbjct: 396 DSPRTAPNNSSPNPDMHSKRDSK-FLRLSSSRIREPTISDSLTSSPDISID-NISNADNE 453