BLASTX nr result

ID: Coptis25_contig00027099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027099
         (1292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31663.3| unnamed protein product [Vitis vinifera]               59   4e-06
ref|NP_001169159.1| putative XH domain family protein [Zea mays]...    59   4e-06

>emb|CBI31663.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 32/85 (37%), Positives = 55/85 (64%)
 Frame = +3

Query: 1029 NSKVQQEMEALRKEMKEKMEEIVDIVSRNQSPTVKELKTNQEMEALRKKLKEKTEEIEHL 1208
            N   QQ+ E L +E +  M E   +  +N  P + ELK   +  ALRK+L+EKT++++H+
Sbjct: 167  NRVFQQQAEELDQEWRTFMAEKKKLTDQN--PMMSELK--DQCIALRKELEEKTDDLQHM 222

Query: 1209 VNLNQTLTFKERKSNQEMEVSRKEM 1283
             ++N+ L  KE+ SN+E++ +RKE+
Sbjct: 223  QSINEALIVKEQMSNRELQNARKEL 247


>ref|NP_001169159.1| putative XH domain family protein [Zea mays]
            gi|223975231|gb|ACN31803.1| unknown [Zea mays]
            gi|414876546|tpg|DAA53677.1| TPA: putative XH domain
            family protein [Zea mays]
          Length = 530

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 31/87 (35%), Positives = 53/87 (60%)
 Frame = +3

Query: 1023 DNNSKVQQEMEALRKEMKEKMEEIVDIVSRNQSPTVKELKTNQEMEALRKKLKEKTEEIE 1202
            D   K++ E++ L  +MK  M            P  ++ ++ ++M+ L ++LKEK +E+E
Sbjct: 305  DAKQKLELEVQTLESKMKVMMH----------MPGDQDSESKKKMDELAEELKEKVDELE 354

Query: 1203 HLVNLNQTLTFKERKSNQEMEVSRKEM 1283
             + +LNQTL  KERKSN E++ +RKE+
Sbjct: 355  AMESLNQTLIIKERKSNDELQHARKEL 381


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