BLASTX nr result

ID: Coptis25_contig00027096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027096
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...   343   2e-92
ref|XP_002524570.1| A/G-specific adenine glycosylase muty, putat...   341   8e-92
ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosyl...   338   5e-91
emb|CBI25679.3| unnamed protein product [Vitis vinifera]              338   5e-91
emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]   338   5e-91

>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  343 bits (880), Expect = 2e-92
 Identities = 169/233 (72%), Positives = 188/233 (80%), Gaps = 1/233 (0%)
 Frame = -2

Query: 709 EESVNKIRASLLSWYYKNQRVFPWRTRTTGNEN-HKDQQEGTSTSKLAYGVWVSEMMLQQ 533
           ++   KIRASLL WY  NQR  PWR  T   E   K+++E     + AYGVWVSE+MLQQ
Sbjct: 43  DKETQKIRASLLEWYDHNQRDLPWRRITQTKETPFKEEEEEEEEERRAYGVWVSEVMLQQ 102

Query: 532 TRVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEGAKMVVEGLGS 353
           TRV TVIDYYNRWM KWPT+HHLA AS EEVNEMWAGLGYYRRARFLLEGAKM+V G G 
Sbjct: 103 TRVQTVIDYYNRWMLKWPTLHHLAQASLEEVNEMWAGLGYYRRARFLLEGAKMIVAG-GD 161

Query: 352 EFPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTISANPKASATIK 173
            FP  VS+LRKVPGIG+YTAGAIASIAF + VPVVDGNVIRVLARLK ISANPK   T+K
Sbjct: 162 GFPKIVSSLRKVPGIGDYTAGAIASIAFKEVVPVVDGNVIRVLARLKAISANPKDKVTVK 221

Query: 172 TFWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFSLSK 14
            FWKLA QLVDP RPGDFNQ+LMELGAT+CTP +P CS CP+SGQCRA ++SK
Sbjct: 222 KFWKLAAQLVDPHRPGDFNQSLMELGATLCTPVNPSCSSCPVSGQCRALTISK 274


>ref|XP_002524570.1| A/G-specific adenine glycosylase muty, putative [Ricinus communis]
           gi|223536123|gb|EEF37778.1| A/G-specific adenine
           glycosylase muty, putative [Ricinus communis]
          Length = 775

 Score =  341 bits (875), Expect = 8e-92
 Identities = 165/236 (69%), Positives = 188/236 (79%)
 Frame = -2

Query: 709 EESVNKIRASLLSWYYKNQRVFPWRTRTTGNENHKDQQEGTSTSKLAYGVWVSEMMLQQT 530
           ++   KIR SLL WY +NQR  PWR + T N + + ++E     K AYG+WVSE+MLQQT
Sbjct: 33  DKETQKIRESLLEWYDQNQRQLPWRRQKTTNPSQESEEE---KEKRAYGIWVSEVMLQQT 89

Query: 529 RVTTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEGAKMVVEGLGSE 350
           RV TVIDYYNRWM KWPTIHHLA AS EEVNE+WAGLGYYRRARFLLEGAKM+V G G  
Sbjct: 90  RVQTVIDYYNRWMLKWPTIHHLAQASLEEVNEIWAGLGYYRRARFLLEGAKMIVAGGG-- 147

Query: 349 FPTTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTISANPKASATIKT 170
           FP TVS+LRKVPGIG+YTAGAIASIAF + VPVVDGNV+RVL RL+ ISANPK S T+K 
Sbjct: 148 FPNTVSSLRKVPGIGDYTAGAIASIAFKEVVPVVDGNVVRVLTRLRAISANPKDSMTVKK 207

Query: 169 FWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFSLSKGHNS 2
            WKLA QLVDPCRPGDFNQ+LMELGAT+C PS+P CS CP+S QCR  S+S    S
Sbjct: 208 LWKLAAQLVDPCRPGDFNQSLMELGATVCAPSNPSCSSCPVSSQCRVLSISNQDKS 263


>ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosylase [Vitis vinifera]
          Length = 464

 Score =  338 bits (868), Expect = 5e-91
 Identities = 168/234 (71%), Positives = 187/234 (79%), Gaps = 3/234 (1%)
 Frame = -2

Query: 694 KIRASLLSWYYKNQRVFPWRTRTTGNENHKDQQEGTSTSKL---AYGVWVSEMMLQQTRV 524
           KIRASLL WY  N+R  PWRT TT    H+D+ +  +   L   AY VWVSE+MLQQTRV
Sbjct: 43  KIRASLLGWYDLNKRNLPWRTPTT-TTTHEDEDDADAHEDLDNRAYAVWVSEVMLQQTRV 101

Query: 523 TTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEGAKMVVEGLGSEFP 344
            TVIDYYNRWMQKWPT+HHL+ AS EEVNEMWAGLGYYRRAR LLEGAKM+ EG    FP
Sbjct: 102 ETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAGLGYYRRARCLLEGAKMISEGKCG-FP 160

Query: 343 TTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTISANPKASATIKTFW 164
            T SALR+VPGIG YTAGAIASIAF +AVPVVDGNV+RV+ARLK IS+NPK SATIK  W
Sbjct: 161 RTTSALREVPGIGNYTAGAIASIAFKEAVPVVDGNVVRVIARLKAISSNPKHSATIKNIW 220

Query: 163 KLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFSLSKGHNS 2
           +LAGQLVDPC+PGDFNQALMELGATICTP  P CS CP+S QC   S+S+ H S
Sbjct: 221 RLAGQLVDPCKPGDFNQALMELGATICTPLKPICSACPVSDQCSVLSMSESHRS 274


>emb|CBI25679.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  338 bits (868), Expect = 5e-91
 Identities = 168/234 (71%), Positives = 187/234 (79%), Gaps = 3/234 (1%)
 Frame = -2

Query: 694 KIRASLLSWYYKNQRVFPWRTRTTGNENHKDQQEGTSTSKL---AYGVWVSEMMLQQTRV 524
           KIRASLL WY  N+R  PWRT TT    H+D+ +  +   L   AY VWVSE+MLQQTRV
Sbjct: 85  KIRASLLGWYDLNKRNLPWRTPTT-TTTHEDEDDADAHEDLDNRAYAVWVSEVMLQQTRV 143

Query: 523 TTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEGAKMVVEGLGSEFP 344
            TVIDYYNRWMQKWPT+HHL+ AS EEVNEMWAGLGYYRRAR LLEGAKM+ EG    FP
Sbjct: 144 ETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAGLGYYRRARCLLEGAKMISEGKCG-FP 202

Query: 343 TTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTISANPKASATIKTFW 164
            T SALR+VPGIG YTAGAIASIAF +AVPVVDGNV+RV+ARLK IS+NPK SATIK  W
Sbjct: 203 RTTSALREVPGIGNYTAGAIASIAFKEAVPVVDGNVVRVIARLKAISSNPKHSATIKNIW 262

Query: 163 KLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFSLSKGHNS 2
           +LAGQLVDPC+PGDFNQALMELGATICTP  P CS CP+S QC   S+S+ H S
Sbjct: 263 RLAGQLVDPCKPGDFNQALMELGATICTPLKPICSACPVSDQCSVLSMSESHRS 316


>emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
          Length = 1031

 Score =  338 bits (868), Expect = 5e-91
 Identities = 168/234 (71%), Positives = 187/234 (79%), Gaps = 3/234 (1%)
 Frame = -2

Query: 694  KIRASLLSWYYKNQRVFPWRTRTTGNENHKDQQEGTSTSKL---AYGVWVSEMMLQQTRV 524
            KIRASLL WY  N+R  PWRT TT    H+D+ +  +   L   AY VWVSE+MLQQTRV
Sbjct: 588  KIRASLLGWYDLNKRNLPWRTPTT-TTTHEDEDDADAHEDLDNRAYAVWVSEVMLQQTRV 646

Query: 523  TTVIDYYNRWMQKWPTIHHLACASQEEVNEMWAGLGYYRRARFLLEGAKMVVEGLGSEFP 344
             TVIDYYNRWMQKWPT+HHL+ AS EEVNEMWAGLGYYRRAR LLEGAKM+ EG    FP
Sbjct: 647  ETVIDYYNRWMQKWPTLHHLSLASLEEVNEMWAGLGYYRRARCLLEGAKMISEGKCG-FP 705

Query: 343  TTVSALRKVPGIGEYTAGAIASIAFNQAVPVVDGNVIRVLARLKTISANPKASATIKTFW 164
             T SALR+VPGIG YTAGAIASIAF +AVPVVDGNV+RV+ARLK IS+NPK SATIK  W
Sbjct: 706  RTTSALREVPGIGNYTAGAIASIAFKEAVPVVDGNVVRVIARLKAISSNPKHSATIKNIW 765

Query: 163  KLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRAFSLSKGHNS 2
            +LAGQLVDPC+PGDFNQALMELGATICTP  P CS CP+S QC   S+S+ H S
Sbjct: 766  RLAGQLVDPCKPGDFNQALMELGATICTPLKPICSACPVSDQCSVLSMSESHRS 819


Top