BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027089
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...    60   1e-14
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...    56   6e-14
emb|CBI34885.3| unnamed protein product [Vitis vinifera]               56   6e-14
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]    56   6e-14

>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score = 60.5 bits (145), Expect(2) = 1e-14
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +1

Query: 127 QNGHSSNKYIAVKLLNMYLSFKKPVEVDKIFEEFGGFNLVAWNCMISAKFQDG 285
           + G SS +YI++KLL MYL+++K  E D+I ++F GF+LV  NCMISA  Q G
Sbjct: 49  KTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQRG 101



 Score = 43.9 bits (102), Expect(2) = 1e-14
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +2

Query: 26  TSFKAYIDTCNSLIKTCSTQGWIQEGRNIHGHLIKMGI 139
           T FK Y  TC SL+K  + QG I++G  +H HL K GI
Sbjct: 15  THFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGI 52


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score = 56.2 bits (134), Expect(2) = 6e-14
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +1

Query: 127 QNGHSSNKYIAVKLLNMYLSFKKPVEVDKIFEEFGGFNLVAWNCMISAKFQDG 285
           + G SS +YIA+KLL +YL+ +K  E+D+I +EF G +LV  NCMISA  Q G
Sbjct: 49  KTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWG 101



 Score = 45.8 bits (107), Expect(2) = 6e-14
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +2

Query: 17  PKKTSFKAYIDTCNSLIKTCSTQGWIQEGRNIHGHLIKMG 136
           PKK SF+AY  TC SL+K  S QG I +G  +H HLIK G
Sbjct: 13  PKK-SFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTG 51


>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score = 56.2 bits (134), Expect(2) = 6e-14
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +1

Query: 127 QNGHSSNKYIAVKLLNMYLSFKKPVEVDKIFEEFGGFNLVAWNCMISAKFQDG 285
           + G SS +YIA+KLL +YL+ +K  E+D+I +EF G +LV  NCMISA  Q G
Sbjct: 49  KTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWG 101



 Score = 45.8 bits (107), Expect(2) = 6e-14
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +2

Query: 17  PKKTSFKAYIDTCNSLIKTCSTQGWIQEGRNIHGHLIKMG 136
           PKK SF+AY  TC SL+K  S QG I +G  +H HLIK G
Sbjct: 13  PKK-SFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTG 51


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score = 56.2 bits (134), Expect(2) = 6e-14
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +1

Query: 127 QNGHSSNKYIAVKLLNMYLSFKKPVEVDKIFEEFGGFNLVAWNCMISAKFQDG 285
           + G SS +YIA+KLL +YL+ +K  E+D+I +EF G +LV  NCMISA  Q G
Sbjct: 49  KTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWG 101



 Score = 45.8 bits (107), Expect(2) = 6e-14
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +2

Query: 17  PKKTSFKAYIDTCNSLIKTCSTQGWIQEGRNIHGHLIKMG 136
           PKK SF+AY  TC SL+K  S QG I +G  +H HLIK G
Sbjct: 13  PKK-SFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTG 51