BLASTX nr result

ID: Coptis25_contig00027076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027076
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinif...   256   1e-66
emb|CAN61462.1| hypothetical protein VITISV_038584 [Vitis vinifera]   254   4e-66
gb|ACH54087.1| class III chitinase [Vitis vinifera]                   254   5e-66
emb|CAA61279.1| basic chitinase class 3 [Vigna unguiculata]           253   1e-65
emb|CAA09110.1| chitinase [Hevea brasiliensis] gi|119871519|gb|A...   251   6e-65

>ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinifera]
          Length = 297

 Score =  256 bits (655), Expect = 1e-66
 Identities = 122/161 (75%), Positives = 138/161 (85%)
 Frame = +3

Query: 3   PLGNATLNGVDFDIELGSTKNWDLLAKYLKSYSKPGKKVYLTAAPQCPLPDAYLDRALNT 182
           PLG+A L+G+DFDIELGST +WD LA+ L  +SK G+KVYLTAAPQCP PD +L  ALNT
Sbjct: 138 PLGDAVLDGIDFDIELGSTLHWDDLARALSGFSKRGRKVYLTAAPQCPFPDKFLGTALNT 197

Query: 183 GLFDFVWIQFYNNAPCQYSSGNVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPA 362
           GLFD+VW+QFYNNAPCQYSSGN  NL+NSW RWTS+I + + F+GLPA+ AAAGSGFIPA
Sbjct: 198 GLFDYVWVQFYNNAPCQYSSGNTNNLLNSWNRWTSSINS-RIFMGLPASSAAAGSGFIPA 256

Query: 363 NVLKSQILPVIKSSRKYGGVMLWSKYYDDLSGYSSSIKGSV 485
           NVL SQILPVIK S KYGGVMLWSKYYDD SGYSSSIK SV
Sbjct: 257 NVLTSQILPVIKRSAKYGGVMLWSKYYDDQSGYSSSIKSSV 297


>emb|CAN61462.1| hypothetical protein VITISV_038584 [Vitis vinifera]
          Length = 297

 Score =  254 bits (650), Expect = 4e-66
 Identities = 121/161 (75%), Positives = 137/161 (85%)
 Frame = +3

Query: 3   PLGNATLNGVDFDIELGSTKNWDLLAKYLKSYSKPGKKVYLTAAPQCPLPDAYLDRALNT 182
           PLG+A L+G+DFDIELGST +WD LA+ L  +SK G+KVYLTAAPQCP PD +L  ALNT
Sbjct: 138 PLGDAVLDGIDFDIELGSTLHWDDLARALSGFSKRGRKVYLTAAPQCPFPDKFLGTALNT 197

Query: 183 GLFDFVWIQFYNNAPCQYSSGNVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPA 362
           GLFD+VW+QFYNN PCQYSSGN  NL+NSW RWTS+I + + F+GLPA+ AAAGSGFIPA
Sbjct: 198 GLFDYVWVQFYNNXPCQYSSGNTNNLLNSWNRWTSSINS-RIFMGLPASSAAAGSGFIPA 256

Query: 363 NVLKSQILPVIKSSRKYGGVMLWSKYYDDLSGYSSSIKGSV 485
           NVL SQILPVIK S KYGGVMLWSKYYDD SGYSSSIK SV
Sbjct: 257 NVLTSQILPVIKRSXKYGGVMLWSKYYDDQSGYSSSIKSSV 297


>gb|ACH54087.1| class III chitinase [Vitis vinifera]
          Length = 297

 Score =  254 bits (649), Expect = 5e-66
 Identities = 121/161 (75%), Positives = 137/161 (85%)
 Frame = +3

Query: 3   PLGNATLNGVDFDIELGSTKNWDLLAKYLKSYSKPGKKVYLTAAPQCPLPDAYLDRALNT 182
           PLG+A L+G+DFDIELGST +WD LA+ L  +SK G+KVYLTAAPQCP PD +L  ALNT
Sbjct: 138 PLGDAVLDGIDFDIELGSTLHWDDLARALSGFSKRGRKVYLTAAPQCPFPDKFLGTALNT 197

Query: 183 GLFDFVWIQFYNNAPCQYSSGNVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPA 362
           GLFD+VW+QFYNN PCQYSSGN  NL+NSW RWTS+I + + F+GLPA+ AAAGSGFIPA
Sbjct: 198 GLFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINS-RIFMGLPASSAAAGSGFIPA 256

Query: 363 NVLKSQILPVIKSSRKYGGVMLWSKYYDDLSGYSSSIKGSV 485
           NVL SQILPVIK S KYGGVMLWSKYYDD SGYSSSIK SV
Sbjct: 257 NVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 297


>emb|CAA61279.1| basic chitinase class 3 [Vigna unguiculata]
          Length = 297

 Score =  253 bits (646), Expect = 1e-65
 Identities = 119/162 (73%), Positives = 142/162 (87%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   PLGNATLNGVDFDIELGSTKNWDLLAKYLKSYSKPGKK-VYLTAAPQCPLPDAYLDRALN 179
           PLG+A L+G+DFDIE GST+N+D LA++LK+YSK GKK VYL AAPQCP+PD +L  AL+
Sbjct: 136 PLGDAELDGIDFDIEQGSTQNYDHLARFLKAYSKKGKKRVYLGAAPQCPIPDRFLGTALD 195

Query: 180 TGLFDFVWIQFYNNAPCQYSSGNVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIP 359
           TGLFDFVW+QFYNN PCQY+ GNVTNL+NSWKRWTST+PA K FLGLPA  AAAGSGF+P
Sbjct: 196 TGLFDFVWVQFYNNPPCQYADGNVTNLLNSWKRWTSTVPAGKIFLGLPAPPAAAGSGFVP 255

Query: 360 ANVLKSQILPVIKSSRKYGGVMLWSKYYDDLSGYSSSIKGSV 485
           A+VL S+ILPVIK SRKYGGVMLWS+++D  +GYS+SI GSV
Sbjct: 256 ADVLTSKILPVIKKSRKYGGVMLWSRFFDVQNGYSTSIIGSV 297


>emb|CAA09110.1| chitinase [Hevea brasiliensis] gi|119871519|gb|ABI32402.2|
           chitinase [Hevea brasiliensis]
          Length = 311

 Score =  251 bits (640), Expect = 6e-65
 Identities = 117/161 (72%), Positives = 135/161 (83%)
 Frame = +3

Query: 3   PLGNATLNGVDFDIELGSTKNWDLLAKYLKSYSKPGKKVYLTAAPQCPLPDAYLDRALNT 182
           PLG+A L+G+DFDIE GST  WD LA+YL +YSK GKKVYLTAAPQCP PD YL  ALNT
Sbjct: 139 PLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNT 198

Query: 183 GLFDFVWIQFYNNAPCQYSSGNVTNLINSWKRWTSTIPAKKYFLGLPAAEAAAGSGFIPA 362
           GLFD+VW+QFYNN PCQYSSGN+ N+INSW RWT++I A K FLGLPAA  AAGSG++P 
Sbjct: 199 GLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPP 258

Query: 363 NVLKSQILPVIKSSRKYGGVMLWSKYYDDLSGYSSSIKGSV 485
           +VL S+ILP IK S KYGGVMLWSK+YDD +GYSSSI+ SV
Sbjct: 259 DVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSIRDSV 299


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