BLASTX nr result

ID: Coptis25_contig00027049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027049
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34946.3| unnamed protein product [Vitis vinifera]              128   5e-28
emb|CAN80789.1| hypothetical protein VITISV_020546 [Vitis vinifera]   128   5e-28
ref|XP_002274835.1| PREDICTED: nodulation receptor kinase-like [...   127   1e-27
ref|XP_002264586.2| PREDICTED: nodulation receptor kinase-like [...   114   1e-23
ref|XP_002517357.1| serine-threonine protein kinase, plant-type,...   104   8e-21

>emb|CBI34946.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  128 bits (321), Expect = 5e-28
 Identities = 72/171 (42%), Positives = 97/171 (56%), Gaps = 15/171 (8%)
 Frame = +2

Query: 35  LRSETDVCRFAVLVSLTSNMIQDENWITTLLGCLGDQ--------------SAGIQVEGR 172
           L+ ETDVCRFAVLVSL S+  +DE+W   +  CL +Q              S+G     R
Sbjct: 170 LKDETDVCRFAVLVSLISSRTEDESWFGKIYTCLREQDIDKGHFHFQSNTRSSGRDETSR 229

Query: 173 SKRK-KINKGLWLLVGGLTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLD 349
           S  K KI+ GLW L+GGL A+ +++ +                 +  L   ++  P+   
Sbjct: 230 SHTKFKISTGLWFLIGGLIAMALIITIGIWFLLRRWCKSYAIPKRAAL---KAVAPEGPG 286

Query: 350 CQEIPIKEIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGH 502
           C +I IKE+++ATNNLN  N IG+G AGKVY+G+L N Q VAVKHIIND H
Sbjct: 287 CMKISIKEVYSATNNLNEKNIIGEGTAGKVYRGILQNNQHVAVKHIINDNH 337


>emb|CAN80789.1| hypothetical protein VITISV_020546 [Vitis vinifera]
          Length = 623

 Score =  128 bits (321), Expect = 5e-28
 Identities = 72/171 (42%), Positives = 97/171 (56%), Gaps = 15/171 (8%)
 Frame = +2

Query: 35  LRSETDVCRFAVLVSLTSNMIQDENWITTLLGCLGDQ--------------SAGIQVEGR 172
           L+ ETDVCRFAVLVSL S+  +DE+W   +  CL +Q              S+G     R
Sbjct: 182 LKDETDVCRFAVLVSLISSRTEDESWFGKIYTCLREQDIDKGHFHFQSNTRSSGRDETSR 241

Query: 173 SKRK-KINKGLWLLVGGLTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLD 349
           S  K KI+ GLW L+GGL A+ +++ +                 +  L   ++  P+   
Sbjct: 242 SHTKFKISTGLWFLIGGLIAMALIITIGIWFLLRRWCKSYAIPKRAAL---KAVAPEGPG 298

Query: 350 CQEIPIKEIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGH 502
           C +I IKE+++ATNNLN  N IG+G AGKVY+G+L N Q VAVKHIIND H
Sbjct: 299 CMKISIKEVYSATNNLNEKNIIGEGTAGKVYRGILQNNQHVAVKHIINDNH 349


>ref|XP_002274835.1| PREDICTED: nodulation receptor kinase-like [Vitis vinifera]
          Length = 594

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/156 (42%), Positives = 91/156 (58%)
 Frame = +2

Query: 35  LRSETDVCRFAVLVSLTSNMIQDENWITTLLGCLGDQSAGIQVEGRSKRKKINKGLWLLV 214
           L+ ETDVCRFAVLVSL S+  +DE+W   +  CL +Q              I+KGLW L+
Sbjct: 182 LKDETDVCRFAVLVSLISSRTEDESWFGKIYTCLREQD-------------IDKGLWFLI 228

Query: 215 GGLTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIPIKEIFAATNN 394
           GGL A+ +++ +                 +  L   ++  P+   C +I IKE+++ATNN
Sbjct: 229 GGLIAMALIITIGIWFLLRRWCKSYAIPKRAAL---KAVAPEGPGCMKISIKEVYSATNN 285

Query: 395 LNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGH 502
           LN  N IG+G AGKVY+G+L N Q VAVKHIIND H
Sbjct: 286 LNEKNIIGEGTAGKVYRGILQNNQHVAVKHIINDNH 321


>ref|XP_002264586.2| PREDICTED: nodulation receptor kinase-like [Vitis vinifera]
          Length = 595

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/164 (39%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
 Frame = +2

Query: 50  DVCRFAVLVSLTSNMIQDENWITTLLGCLGDQSAGIQVEGRSKRKKINKG---------- 199
           DVCRF+VLVSL S  I ++ W+  +  CL  QS  + +    K+  I KG          
Sbjct: 182 DVCRFSVLVSLISKRIGEKKWVQEVCRCLRKQSTPMAMGSVEKKPNIRKGEPSLLSPINN 241

Query: 200 -----LWLLVGGLTAITIMVGVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLDCQEIP 364
                L+ ++GGL  I ++V +A                KD     + S  +   C  I 
Sbjct: 242 ISITGLYFVIGGLMGIAVIVLIASWILCSRRHKDDYPKGKDA---SDDSESEEFRCLNIS 298

Query: 365 IKEIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIIND 496
           IKEI++ATNNL+A NFIGQGIAGKVY+G+L+NGQ +AVKHI ++
Sbjct: 299 IKEIYSATNNLSASNFIGQGIAGKVYRGMLSNGQHIAVKHIFDN 342


>ref|XP_002517357.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223543368|gb|EEF44899.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 605

 Score =  104 bits (259), Expect = 8e-21
 Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 17/171 (9%)
 Frame = +2

Query: 41  SETDVCRFAVLVSLTSNMIQDENWITTLLGCLGDQ-----SAGIQVEGRSKRKKIN---- 193
           S  ++CRFAVLV+LTS  I D ++I  +  CL +Q     SA   V+ + K    +    
Sbjct: 183 SNANICRFAVLVALTSTRIDDNSYINRVYRCLANQNNDTESAETAVKSKPKISTGDSLQP 242

Query: 194 -------KGLWLLVGGLTAITIMV-GVAXXXXXXXXXXXXXXXSKDVLAVKESSPPKNLD 349
                  +G+W+L+G L A T M+  +A                K+     ++   +N  
Sbjct: 243 LMISIRLQGIWILIGCLFAATAMIITIAANIVSRRRLKSKVPLEKNAF---KNLQLENSR 299

Query: 350 CQEIPIKEIFAATNNLNAMNFIGQGIAGKVYKGVLANGQPVAVKHIINDGH 502
           C + P++E++ ATNNL+  N IG+G AGKVYKGVL+N Q VA+KHIINDG+
Sbjct: 300 CPKFPLREVYLATNNLSDENLIGEGTAGKVYKGVLSNSQHVAIKHIINDGN 350


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