BLASTX nr result
ID: Coptis25_contig00027047
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00027047 (903 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518234.1| pentatricopeptide repeat-containing protein,... 301 2e-79 ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containi... 299 7e-79 ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containi... 299 7e-79 ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containi... 290 2e-76 ref|NP_001078759.1| pentatricopeptide repeat-containing protein ... 268 2e-69 >ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542581|gb|EEF44120.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 932 Score = 301 bits (770), Expect = 2e-79 Identities = 154/296 (52%), Positives = 197/296 (66%), Gaps = 2/296 (0%) Frame = -2 Query: 884 SKTLSTSAISYTSSQNLSKTLSLQNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLLYLFSQ 705 S +++T +S S S + S+QNLLK GFTPTLK++N +L FL K + + + SQ Sbjct: 4 STSVTTIKLSRYFSSFSSASSSIQNLLKRGFTPTLKSINQYLLFLVKIHKFTLVPHFLSQ 63 Query: 704 MNANNIKGNSQTHSIITRTLVKANRYEEAEHFMTQMLKDGHFPQKG--ICDSLIQGLISP 531 +N N I+GN QTHS+ L+K +EEAEHF+ KG DSLIQ + + Sbjct: 64 LNQNQIEGNYQTHSLFLLALLKLKNFEEAEHFIKTHRAKSSSSSKGHKFLDSLIQAISTD 123 Query: 530 GESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFD 351 + P +A VL CL+ GM PS FTFC ++HSF GNM I+VLELM+ E YPF Sbjct: 124 EKDPNKALLVLHDCLRNYGMLPSSFTFCSVIHSFVLQGNMSGAIQVLELMNDEKINYPFC 183 Query: 350 NFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCEL 171 NFVCSS++SGFCK+GKPELA+GF++N K G L+ PN+VTYTA+VS+LC GR EV +L Sbjct: 184 NFVCSSIVSGFCKMGKPELAMGFFENSLKLGALK-PNLVTYTAVVSSLCMLGRADEVFDL 242 Query: 170 VHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 V +ME EG+ D VFYS WICGYF GV EA RKH+EM+ KGI DT+ YTILID Sbjct: 243 VCEMEEEGLAFDVVFYSCWICGYFRNGVFIEAIRKHKEMVKKGISSDTIGYTILID 298 Score = 90.9 bits (224), Expect = 4e-16 Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 33/221 (14%) Frame = -2 Query: 566 ICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLE 387 +C S++ G G+ PE A + LK + P+ T+ +V S G D V +++ Sbjct: 186 VCSSIVSGFCKMGK-PELAMGFFENSLKLGALKPNLVTYTAVVSSLCMLGRADEVFDLVC 244 Query: 386 LMSGENFRYPFDNFVC---------------------------------SSVISGFCKIG 306 M E + + C + +I GF K G Sbjct: 245 EMEEEGLAFDVVFYSCWICGYFRNGVFIEAIRKHKEMVKKGISSDTIGYTILIDGFSKEG 304 Query: 305 KPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVF 126 E ++GF ++ +G PN+VTYTAI+ C++G++ E + +EN G+ LD Sbjct: 305 SVEKSVGFLHHMLANGSE--PNLVTYTAIILGFCRKGKIDEAFAIFKLVENLGIKLDEFI 362 Query: 125 YSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 Y+ + G+ KG D A++ EM KGI P V+Y ILI+ Sbjct: 363 YAILVDGFCLKGDFDRAYQLIEEMEKKGITPTIVAYNILIN 403 Score = 65.1 bits (157), Expect = 2e-08 Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 5/275 (1%) Frame = -2 Query: 815 QNLLKSG-FTPTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITRTLVK 639 +N LK G P L T +S L + + L +M + + +S + Sbjct: 208 ENSLKLGALKPNLVTYTAVVSSLCMLGRADEVFDLVCEMEEEGLAFDVVFYSCWICGYFR 267 Query: 638 ANRYEEAEHFMTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSR 459 + EA +M+K G LI G G S E++ L L G P+ Sbjct: 268 NGVFIEAIRKHKEMVKKGISSDTIGYTILIDGFSKEG-SVEKSVGFLHHMLA-NGSEPNL 325 Query: 458 FTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCKIGKPELALGFY 279 T+ ++ F G +D + +L+ EN D F+ + ++ GFC G + A Sbjct: 326 VTYTAIILGFCRKGKIDEAFAIFKLV--ENLGIKLDEFIYAILVDGFCLKGDFDRAYQLI 383 Query: 278 DNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYF 99 + +EK G+ P +V Y ++++LCK GR + E+ ++ D + YS+ + GY Sbjct: 384 EEMEKKGI--TPTIVAYNILINSLCKAGRTFDADEVSKALQG-----DKITYSALLHGYI 436 Query: 98 EK----GVLDEAFRKHREMLCKGIKPDTVSYTILI 6 ++ G+L+ R I+ D + + I++ Sbjct: 437 KEENSIGILEVRQRLEEAR----IQMDIIMFNIIL 467 Score = 62.4 bits (150), Expect = 1e-07 Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 8/292 (2%) Frame = -2 Query: 881 KTLSTSAISYT-------SSQNLSKTLS-LQNLLKSGFTPTLKTLNHFLSFLSKSNHLNF 726 K +S+ I YT ++ K++ L ++L +G P L T + + ++ Sbjct: 284 KGISSDTIGYTILIDGFSKEGSVEKSVGFLHHMLANGSEPNLVTYTAIILGFCRKGKIDE 343 Query: 725 LLYLFSQMNANNIKGNSQTHSIITRTLVKANRYEEAEHFMTQMLKDGHFPQKGICDSLIQ 546 +F + IK + ++I+ ++ A + +M K G P + LI Sbjct: 344 AFAIFKLVENLGIKLDEFIYAILVDGFCLKGDFDRAYQLIEEMEKKGITPTIVAYNILIN 403 Query: 545 GLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENF 366 L G R F + +G + T+ L+H + N ++EV + + E Sbjct: 404 SLCKAG----RTFDADEVSKALQG---DKITYSALLHGYIKEENSIGILEVRQRL--EEA 454 Query: 365 RYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVK 186 R D + + ++ +G E L Y+ +++ ++ N +TY I+ CK GR+ Sbjct: 455 RIQMDIIMFNIILKALFVVGAFEDVLVLYNGMQEMNLVA--NSITYCTIIGGFCKVGRID 512 Query: 185 EVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPD 30 E E+ + + G+ Y+ I G + G++D A E++ KG+ D Sbjct: 513 EALEIFDEFRH-GLGSSVACYNCMINGLCKNGMVDMAAEIFVELIEKGLTLD 563 >ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like [Cucumis sativus] Length = 1061 Score = 299 bits (765), Expect = 7e-79 Identities = 149/286 (52%), Positives = 204/286 (71%), Gaps = 2/286 (0%) Frame = -2 Query: 857 SYTSSQN-LSKTLSLQNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKG 681 S+T S N S + LQ LLKSGF+PTLK++NHF FL + +++++ F Q+NAN IKG Sbjct: 15 SFTFSSNPSSNSRCLQTLLKSGFSPTLKSINHFFRFLYHNRRFDYVIHFFYQLNANQIKG 74 Query: 680 NSQTHSIITRTLVKANRYEEAEHFM-TQMLKDGHFPQKGICDSLIQGLISPGESPERAFS 504 NS+TH I++ L+K+++Y++ E + TQML F + + + LI+G+ E P +A Sbjct: 75 NSKTHLILSWALLKSHKYDDLEQILKTQMLVSSIFHRNRLWNLLIRGICVNKEDPGKALW 134 Query: 503 VLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVIS 324 VLQ C + + PS FTFC+L+H F G MD+ +E+LELMS EN YPFDNFVCSSVIS Sbjct: 135 VLQDCFRNHAILPSSFTFCVLIHKFCSLGMMDKAVEILELMSDENVNYPFDNFVCSSVIS 194 Query: 323 GFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGV 144 GFC IGKPELAL F++N + G L+ PN+VTYTA++ ALCK RV +V +LV +ME E + Sbjct: 195 GFCNIGKPELALKFFENAKTLGNLK-PNLVTYTAVIGALCKLHRVNQVSDLVCEMEKENL 253 Query: 143 VLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILI 6 D VFYS WICGY +G+L +AF+++REM+ KGI+PDT+S TILI Sbjct: 254 AFDVVFYSCWICGYIAEGMLLDAFKRNREMVQKGIRPDTISCTILI 299 Score = 84.0 bits (206), Expect = 4e-14 Identities = 66/261 (25%), Positives = 118/261 (45%) Frame = -2 Query: 788 PTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITRTLVKANRYEEAEHF 609 P L T + L K + +N + L +M N+ + +S + +A Sbjct: 220 PNLVTYTAVIGALCKLHRVNQVSDLVCEMEKENLAFDVVFYSCWICGYIAEGMLLDAFKR 279 Query: 608 MTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSF 429 +M++ G P C LI GL G + E+AF VL++ K G+ S T+ +++ F Sbjct: 280 NREMVQKGIRPDTISCTILIYGLSKLG-NVEKAFGVLERMRK-SGLELSSVTYTVIMLGF 337 Query: 428 SCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLR 249 G ++ + E++ G D F+ +++I G C+ G + G D +E G+ Sbjct: 338 CKKGKLEEAFSLFEMVKG--LEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKS 395 Query: 248 CPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFR 69 ++VTY +++ LCK GR E L ++G+ D + YS+ + GY ++ + F Sbjct: 396 --SIVTYNTVINGLCKWGRTSEADRL-----SKGLHGDVITYSTLLHGYIQEQNITGIFE 448 Query: 68 KHREMLCKGIKPDTVSYTILI 6 R + GI D + +LI Sbjct: 449 TKRRLEDAGISLDVIMCNVLI 469 Score = 67.8 bits (164), Expect = 3e-09 Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 11/268 (4%) Frame = -2 Query: 776 TLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITRTLVKANRYEEAEHFMTQM 597 T N + FL K +S+M + +T + + L E + ++++ Sbjct: 603 TCNDAIRFLCKRGFSEMASEFYSRMMRTRLLLEKKTFYFLIKAL-----NSEGKTWISRP 657 Query: 596 LKDGHFPQKGICDSLIQGLI----------SPGESPERAFSVLQQCLKFRGMSPSRFTFC 447 + + G+ D +++ +I E E +FS + + F + Sbjct: 658 IFSNFLKEYGLFDPIVKQIIVDFECTKFTLPTSEKMEESFSRFMRGNNL--LLGDVFDYS 715 Query: 446 MLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSS-VISGFCKIGKPELALGFYDNV 270 LVH G M +++ + N +C + VI G C + A +D++ Sbjct: 716 TLVHGLCKGGQMSEALDICVSAKTNGMKL---NIICYNIVIKGLCLQSRLIQAFQLFDSL 772 Query: 269 EKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKG 90 E+ G++ P +TY ++ +LC+EG +++ +L +M +G+ + Y+S I GY G Sbjct: 773 ERLGLI--PTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLIDGYIRIG 830 Query: 89 VLDEAFRKHREMLCKGIKPDTVSYTILI 6 ++EAF+ E+ PD S + I Sbjct: 831 QIEEAFKLLHELRTGAFNPDEFSVSSAI 858 Score = 67.4 bits (163), Expect = 4e-09 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 33/221 (14%) Frame = -2 Query: 566 ICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLE 387 +C S+I G + G+ PE A + + P+ T+ ++ + +++V +++ Sbjct: 188 VCSSVISGFCNIGK-PELALKFFENAKTLGNLKPNLVTYTAVIGALCKLHRVNQVSDLVC 246 Query: 386 LMSGENFRYPF---------------------------------DNFVCSSVISGFCKIG 306 M EN + D C+ +I G K+G Sbjct: 247 EMEKENLAFDVVFYSCWICGYIAEGMLLDAFKRNREMVQKGIRPDTISCTILIYGLSKLG 306 Query: 305 KPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVF 126 E A G + + KSG+ + VTYT I+ CK+G+++E L ++ + +D Sbjct: 307 NVEKAFGVLERMRKSGLEL--SSVTYTVIMLGFCKKGKLEEAFSLFEMVKGLEMEVDEFM 364 Query: 125 YSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 Y++ I G KG D F EM +G+K V+Y +I+ Sbjct: 365 YATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYNTVIN 405 Score = 57.4 bits (137), Expect = 5e-06 Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 14/290 (4%) Frame = -2 Query: 899 VYTHFSKTLSTSAISYTSSQNLSKTLSLQNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLL 720 + F T T S ++ S+ + NLL G TL H L K ++ L Sbjct: 676 IIVDFECTKFTLPTSEKMEESFSRFMRGNNLLL-GDVFDYSTLVHGLC---KGGQMSEAL 731 Query: 719 YLFSQMNANNIKGNSQTHSIITRTLVKANRYEEAEHFMTQMLKDGHFPQKGICDSLIQGL 540 + N +K N ++I+ + L +R +A + + G P + +LI L Sbjct: 732 DICVSAKTNGMKLNIICYNIVIKGLCLQSRLIQAFQLFDSLERLGLIPTEITYGTLIDSL 791 Query: 539 ISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVL-ELMSGENFR 363 G E A + ++ + +G+ P+ + L+ + G ++ ++L EL +G Sbjct: 792 CREGYL-EDARQLFERMIP-KGLKPNTHIYNSLIDGYIRIGQIEEAFKLLHELRTGA--- 846 Query: 362 YPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKE 183 + D F SS I +C+ G E AL F+ + G+ P+ + + ++ LC +GR++E Sbjct: 847 FNPDEFSVSSAIKAYCQKGDMEGALSFFFEFKNEGI--SPDFLGFLYLIRGLCAKGRMEE 904 Query: 182 -------------VCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAF 72 V EL++K++ E ++A S + E+G + EA+ Sbjct: 905 ARDILRETIQSQSVMELINKVDTE---IEAESIGSALTHLCEEGRILEAY 951 >ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like [Cucumis sativus] Length = 1085 Score = 299 bits (765), Expect = 7e-79 Identities = 149/286 (52%), Positives = 204/286 (71%), Gaps = 2/286 (0%) Frame = -2 Query: 857 SYTSSQN-LSKTLSLQNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKG 681 S+T S N S + LQ LLKSGF+PTLK++NHF FL + +++++ F Q+NAN IKG Sbjct: 15 SFTFSSNPSSNSRCLQTLLKSGFSPTLKSINHFFRFLYHNRRFDYVIHFFYQLNANQIKG 74 Query: 680 NSQTHSIITRTLVKANRYEEAEHFM-TQMLKDGHFPQKGICDSLIQGLISPGESPERAFS 504 NS+TH I++ L+K+++Y++ E + TQML F + + + LI+G+ E P +A Sbjct: 75 NSKTHLILSWALLKSHKYDDLEQILKTQMLVSSIFHRNRLWNLLIRGICVNKEDPGKALW 134 Query: 503 VLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVIS 324 VLQ C + + PS FTFC+L+H F G MD+ +E+LELMS EN YPFDNFVCSSVIS Sbjct: 135 VLQDCFRNHAILPSSFTFCVLIHKFCSLGMMDKAVEILELMSDENVNYPFDNFVCSSVIS 194 Query: 323 GFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGV 144 GFC IGKPELAL F++N + G L+ PN+VTYTA++ ALCK RV +V +LV +ME E + Sbjct: 195 GFCNIGKPELALKFFENAKTLGNLK-PNLVTYTAVIGALCKLHRVNQVSDLVCEMEKENL 253 Query: 143 VLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILI 6 D VFYS WICGY +G+L +AF+++REM+ KGI+PDT+S TILI Sbjct: 254 AFDVVFYSCWICGYIAEGMLLDAFKRNREMVQKGIRPDTISCTILI 299 Score = 84.0 bits (206), Expect = 4e-14 Identities = 66/261 (25%), Positives = 118/261 (45%) Frame = -2 Query: 788 PTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITRTLVKANRYEEAEHF 609 P L T + L K + +N + L +M N+ + +S + +A Sbjct: 220 PNLVTYTAVIGALCKLHRVNQVSDLVCEMEKENLAFDVVFYSCWICGYIAEGMLLDAFKR 279 Query: 608 MTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSF 429 +M++ G P C LI GL G + E+AF VL++ K G+ S T+ +++ F Sbjct: 280 NREMVQKGIRPDTISCTILIYGLSKLG-NVEKAFGVLERMRK-SGLELSSVTYTVIMLGF 337 Query: 428 SCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLR 249 G ++ + E++ G D F+ +++I G C+ G + G D +E G+ Sbjct: 338 CKKGKLEEAFSLFEMVKG--LEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKS 395 Query: 248 CPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFR 69 ++VTY +++ LCK GR E L ++G+ D + YS+ + GY ++ + F Sbjct: 396 --SIVTYNTVINGLCKWGRTSEADRL-----SKGLHGDVITYSTLLHGYIQEQNITGIFE 448 Query: 68 KHREMLCKGIKPDTVSYTILI 6 R + GI D + +LI Sbjct: 449 TKRRLEDAGISLDVIMCNVLI 469 Score = 67.4 bits (163), Expect = 4e-09 Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 33/221 (14%) Frame = -2 Query: 566 ICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLE 387 +C S+I G + G+ PE A + + P+ T+ ++ + +++V +++ Sbjct: 188 VCSSVISGFCNIGK-PELALKFFENAKTLGNLKPNLVTYTAVIGALCKLHRVNQVSDLVC 246 Query: 386 LMSGENFRYPF---------------------------------DNFVCSSVISGFCKIG 306 M EN + D C+ +I G K+G Sbjct: 247 EMEKENLAFDVVFYSCWICGYIAEGMLLDAFKRNREMVQKGIRPDTISCTILIYGLSKLG 306 Query: 305 KPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVF 126 E A G + + KSG+ + VTYT I+ CK+G+++E L ++ + +D Sbjct: 307 NVEKAFGVLERMRKSGLEL--SSVTYTVIMLGFCKKGKLEEAFSLFEMVKGLEMEVDEFM 364 Query: 125 YSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 Y++ I G KG D F EM +G+K V+Y +I+ Sbjct: 365 YATLIDGCCRKGDFDRVFGLLDEMETRGMKSSIVTYNTVIN 405 Score = 65.9 bits (159), Expect = 1e-08 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 1/152 (0%) Frame = -2 Query: 458 FTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSS-VISGFCKIGKPELALGF 282 F + LVH G M +++ + N +C + VI G C + A Sbjct: 736 FDYSTLVHGLCKGGQMSEALDICVSAKTNGMKL---NIICYNIVIKGLCLQSRLIQAFQL 792 Query: 281 YDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGY 102 +D++E+ G++ P +TY ++ +LC+EG +++ +L +M +G+ + Y+S I GY Sbjct: 793 FDSLERLGLI--PTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNTHIYNSLIDGY 850 Query: 101 FEKGVLDEAFRKHREMLCKGIKPDTVSYTILI 6 G ++EAF+ E+ PD S + I Sbjct: 851 IRIGQIEEAFKLLHELRTGAFNPDEFSVSSAI 882 Score = 60.1 bits (144), Expect = 7e-07 Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 1/259 (0%) Frame = -2 Query: 776 TLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITRTLVKANRYEEAEHFMTQM 597 T N + FL K +S+M + +T + + L E + ++++ Sbjct: 603 TCNDAIRFLCKRGFSEMASEFYSRMMRTRLLLEKKTFYFLIKAL-----NSEGKTWISRP 657 Query: 596 LKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYG 417 + + G+ D +++ +I E + ++ M S F + F Sbjct: 658 IFSNFLKEYGLFDPIVKQIIVDFECTKFTLPTSEK------MEESFSRFMVPNSMFKRLV 711 Query: 416 NMDRVIEVLEL-MSGENFRYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPN 240 R + L M N D F S+++ G CK G+ AL + + +G+ N Sbjct: 712 KEKRFFDAYNLVMKRGNNLLLGDVFDYSTLVHGLCKGGQMSEALDICVSAKTNGMKL--N 769 Query: 239 VVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHR 60 ++ Y ++ LC + R+ + +L +E G++ + Y + I +G L++A + Sbjct: 770 IICYNIVIKGLCLQSRLIQAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFE 829 Query: 59 EMLCKGIKPDTVSYTILID 3 M+ KG+KP+T Y LID Sbjct: 830 RMIPKGLKPNTHIYNSLID 848 >ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like [Glycine max] Length = 1064 Score = 290 bits (743), Expect = 2e-76 Identities = 155/276 (56%), Positives = 192/276 (69%) Frame = -2 Query: 830 KTLSLQNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITR 651 +TLSLQ LK GFTPT K +N FL FL + N + + FSQ+ +NN N +T S++T Sbjct: 6 RTLSLQTSLKRGFTPTPKPINCFLLFLFRHRKFNLITHFFSQLKSNNAPTNRRTLSLLTW 65 Query: 650 TLVKANRYEEAEHFMTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFRGM 471 +L+K++++EEAE FM H + DSLIQGL PE+A SVLQ+C++ RG+ Sbjct: 66 SLLKSHKFEEAEQFMHSHT---HITHSSMWDSLIQGL----HDPEKALSVLQRCVRDRGV 118 Query: 470 SPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCKIGKPELA 291 PS TFC++VH S G M R IEVLELM+G+ RYPFD+FVCSSVISGFC+IGKPELA Sbjct: 119 LPSSSTFCLVVHKLSSKGLMGRAIEVLELMAGDGVRYPFDDFVCSSVISGFCRIGKPELA 178 Query: 290 LGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWI 111 LGF+ NV G LR PNVVT TA+V ALCK GRV EVC LV ME EG+ LD V YS+W Sbjct: 179 LGFFKNVTDCGGLR-PNVVTCTALVGALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWA 237 Query: 110 CGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 CGY E+ VL E F + REM+ KGI D VSYT+L+D Sbjct: 238 CGYVEERVLGEVFGRMREMVEKGIGHDFVSYTVLVD 273 Score = 68.2 bits (165), Expect = 3e-09 Identities = 47/223 (21%), Positives = 102/223 (45%) Frame = -2 Query: 671 THSIITRTLVKANRYEEAEHFMTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQ 492 +++++ K E++ F+ +M+K+GH P K +++ G+ E AF V + Sbjct: 267 SYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKV-EEAFGVFES 325 Query: 491 CLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCK 312 +K G+ + F +L+ F G+ D+V + + M + ++V++G K Sbjct: 326 -MKDLGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAY--NAVMNGLSK 382 Query: 311 IGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDA 132 G+ A NV +V+TY+ ++ +E + + + ++E G+ +D Sbjct: 383 HGRTSEADELLKNV-------AADVITYSTLLHGYMEEENIPGILQTKRRLEESGISMDV 435 Query: 131 VFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 V + I F G ++ + ++ M + P++V+Y +ID Sbjct: 436 VMCNVLIRALFMMGAFEDVYALYKGMPEMDLIPNSVTYCTMID 478 Score = 58.2 bits (139), Expect = 3e-06 Identities = 37/110 (33%), Positives = 55/110 (50%) Frame = -2 Query: 332 VISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMEN 153 VI G CK G AL VEK G+ N+V Y +I++ LC EGR+ E L+ +E Sbjct: 716 VIDGLCKGGYLNKALDLCAFVEKKGMNL--NIVIYNSIINGLCHEGRLIEAFRLLDSIEK 773 Query: 152 EGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 +V + Y++ I +G L +A +M+ KG +P Y L+D Sbjct: 774 LNLVPSEITYATVIYALCREGFLLDAEHVFSKMVLKGFQPKVQVYNSLLD 823 Score = 58.2 bits (139), Expect = 3e-06 Identities = 33/114 (28%), Positives = 64/114 (56%) Frame = -2 Query: 344 VCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVH 165 + +S+I+G C G+ A D++EK ++ P+ +TY ++ ALC+EG + + + Sbjct: 747 IYNSIINGLCHEGRLIEAFRLLDSIEKLNLV--PSEITYATVIYALCREGFLLDAEHVFS 804 Query: 164 KMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 KM +G Y+S + G + G L++AF +M K I+PD+++ + +I+ Sbjct: 805 KMVLKGFQPKVQVYNSLLDGISKFGQLEKAFELLNDMETKYIEPDSLTISAVIN 858 >ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g57250, mitochondrial; Flags: Precursor gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 971 Score = 268 bits (684), Expect = 2e-69 Identities = 137/278 (49%), Positives = 188/278 (67%), Gaps = 1/278 (0%) Frame = -2 Query: 833 SKTLSLQNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIIT 654 S SLQ+LLKSGF+PTL +++ FL +L + N +L +SQ+++ I N + +SI++ Sbjct: 9 SGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVS 68 Query: 653 RTLVKANRYEEAEHFMT-QMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFR 477 + NRYE+AE F+ + K FP+ + DSLI G + P + +L+ CL+ Sbjct: 69 WAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNH 128 Query: 476 GMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCKIGKPE 297 G PS TFC L++ F G MD IEVLE+M+ +N YPFDNFVCS+VISGFCKIGKPE Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188 Query: 296 LALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSS 117 LALGF+++ SGVL PN+VTYT +VSALC+ G+V EV +LV ++E+EG D VFYS+ Sbjct: 189 LALGFFESAVDSGVL-VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247 Query: 116 WICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILID 3 WI GYF+ G L +A + REM+ KG+ D VSY+ILID Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILID 285 Score = 81.3 bits (199), Expect = 3e-13 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 34/255 (13%) Frame = -2 Query: 665 SIITRTLVKANRYEEAEHFMTQMLKDGHFP-QKGICDSLIQGLISPGESPERAFSVLQQC 489 S+I R + K E K+ ++P +C ++I G G+ PE A + Sbjct: 139 SLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGK-PELALGFFESA 197 Query: 488 LKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYP---FDNFV-------- 342 + + P+ T+ LV + G +D V +++ + E F + + N++ Sbjct: 198 VDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGA 257 Query: 341 ----------------------CSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTY 228 S +I G K G E ALG + K GV PN++TY Sbjct: 258 LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE--PNLITY 315 Query: 227 TAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLC 48 TAI+ LCK G+++E L +++ + G+ +D Y + I G KG L+ AF +M Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375 Query: 47 KGIKPDTVSYTILID 3 +GI+P ++Y +I+ Sbjct: 376 RGIQPSILTYNTVIN 390 Score = 70.1 bits (170), Expect = 7e-10 Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 28/290 (9%) Frame = -2 Query: 815 QNLLKSGFTPTLKTLNHFLSFLSKSNHLNFLLYLFSQMNANNIKGNSQTHSIITRTLVKA 636 + +++ G + + + + LSK ++ L L +M ++ N T++ I R L K Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325 Query: 635 NRYEEAEHFMTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQCLKFRGMSPSRF 456 + EEA ++L G + + +LI G+ G RAFS+L ++ RG+ PS Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL-NRAFSMLGD-MEQRGIQPSIL 383 Query: 455 TFCMLVHSFSCYGNMDRVIEVLELMSGENFRY---------------------------- 360 T+ +++ G + EV + + G+ Y Sbjct: 384 TYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443 Query: 359 PFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEV 180 P D +C+ ++ F +G A Y + + + P+ TY ++ CK G+++E Sbjct: 444 PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT--PDTATYATMIKGYCKTGQIEEA 501 Query: 179 CELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPD 30 E+ +++ V AV Y+ I +KG+LD A E+ KG+ D Sbjct: 502 LEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550 Score = 65.5 bits (158), Expect = 2e-08 Identities = 47/183 (25%), Positives = 83/183 (45%) Frame = -2 Query: 554 LIQGLISPGESPERAFSVLQQCLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSG 375 LI GL G + E A +L + +K G+ P+ T+ ++ G ++ + + Sbjct: 283 LIDGLSKEG-NVEEALGLLGKMIK-EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340 Query: 374 ENFRYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEG 195 D F+ ++I G C+ G A ++E+ G+ P+++TY +++ LC G Sbjct: 341 VGIEV--DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ--PSILTYNTVINGLCMAG 396 Query: 194 RVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYT 15 RV E E+ ++GVV D + YS+ + Y + +D R L I D V Sbjct: 397 RVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451 Query: 14 ILI 6 IL+ Sbjct: 452 ILL 454 Score = 63.5 bits (153), Expect = 6e-08 Identities = 55/222 (24%), Positives = 98/222 (44%) Frame = -2 Query: 671 THSIITRTLVKANRYEEAEHFMTQMLKDGHFPQKGICDSLIQGLISPGESPERAFSVLQQ 492 ++SI+ L K EEA + +M+K+G P ++I+GL G+ E AF + + Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKL-EEAFVLFNR 337 Query: 491 CLKFRGMSPSRFTFCMLVHSFSCYGNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCK 312 L G+ F + L+ GN++R +L M + + ++VI+G C Sbjct: 338 ILSV-GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY--NTVINGLCM 394 Query: 311 IGKPELALGFYDNVEKSGVLRCPNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDA 132 G+ A D V K V +V+TY+ ++ + K + V E+ + + +D Sbjct: 395 AGRVSEA----DEVSKGVV---GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447 Query: 131 VFYSSWICGYFEKGVLDEAFRKHREMLCKGIKPDTVSYTILI 6 V + + + G EA +R M + PDT +Y +I Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMI 489 Score = 58.9 bits (141), Expect = 2e-06 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 2/141 (1%) Frame = -2 Query: 419 GNMDRVIEVLELMSGENFRYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSG--VLRC 246 G+ + IEV +M + F + + +++ +L Y V +G L Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL-------RSLDAYLLVVNAGETTLSS 652 Query: 245 PNVVTYTAIVSALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRK 66 +V+ YT I++ LCKEG + + L ++ GV L+ + Y+S I G ++G L EA R Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712 Query: 65 HREMLCKGIKPDTVSYTILID 3 + G+ P V+Y ILID Sbjct: 713 FDSLENIGLVPSEVTYGILID 733 Score = 57.4 bits (137), Expect = 5e-06 Identities = 36/131 (27%), Positives = 64/131 (48%) Frame = -2 Query: 395 VLELMSGENFRYPFDNFVCSSVISGFCKIGKPELALGFYDNVEKSGVLRCPNVVTYTAIV 216 +L + +GE D + +I+G CK G AL + GV N +TY +++ Sbjct: 640 LLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTL--NTITYNSLI 697 Query: 215 SALCKEGRVKEVCELVHKMENEGVVLDAVFYSSWICGYFEKGVLDEAFRKHREMLCKGIK 36 + LC++G + E L +EN G+V V Y I ++G+ +A + M+ KG+ Sbjct: 698 NGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 757 Query: 35 PDTVSYTILID 3 P+ + Y ++D Sbjct: 758 PNIIIYNSIVD 768