BLASTX nr result

ID: Coptis25_contig00027039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027039
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265407.1| PREDICTED: uncharacterized protein LOC100254...   280   2e-73
ref|XP_002313913.1| predicted protein [Populus trichocarpa] gi|2...   273   4e-71
ref|XP_002527519.1| conserved hypothetical protein [Ricinus comm...   270   2e-70
emb|CBI22453.3| unnamed protein product [Vitis vinifera]              268   7e-70
ref|XP_003549567.1| PREDICTED: uncharacterized protein LOC100798...   256   3e-66

>ref|XP_002265407.1| PREDICTED: uncharacterized protein LOC100254857 [Vitis vinifera]
          Length = 221

 Score =  280 bits (717), Expect = 2e-73
 Identities = 144/220 (65%), Positives = 170/220 (77%), Gaps = 4/220 (1%)
 Frame = +3

Query: 30  PSSRIFVSSQVMPIRTHI----TPASSSKILSHSAKARLNSFTNNNDQNELSCIPTMLEI 197
           PSS+  + +   P  TH      PAS +  L    K   N+   N++      IPTM EI
Sbjct: 8   PSSKFSILNPTPPPATHFISSTVPASQAAPL-FPVKPHYNAAHKNSNS-----IPTMSEI 61

Query: 198 MNSSKSQNVNIQLQTLGPFFRITATSLETNNELGKAEGIIRLWWGGKILHLDSVRLQRET 377
           M+SS++QN+N+QLQTLGPFFRITA SLET  ELG+AEG+IR+W GG+ILHLDS+RL+RET
Sbjct: 62  MDSSRAQNLNLQLQTLGPFFRITAKSLETQGELGRAEGLIRVWLGGRILHLDSIRLRRET 121

Query: 378 LSMEKSIFGIGLFVGAVAIRYGYDCGCEIAELLAINDSDLYHSKLVRFYTRIGFKAVHEV 557
           L MEKSIFGIGLF+GAVAIRYGYD GC  AELLAINDSDLYHSKLVRFYTRIGFKAVHEV
Sbjct: 122 LGMEKSIFGIGLFIGAVAIRYGYDSGCRTAELLAINDSDLYHSKLVRFYTRIGFKAVHEV 181

Query: 558 TGSSIRDMVDMLVWGGYGTRMDADVTQLLIKWGRRFKEQN 677
           TGSS+ D+  MLVWGG GTRMDA + +LL++W +RFK QN
Sbjct: 182 TGSSMGDLAHMLVWGGIGTRMDAKIEELLVRWCKRFKSQN 221


>ref|XP_002313913.1| predicted protein [Populus trichocarpa] gi|222850321|gb|EEE87868.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  273 bits (697), Expect = 4e-71
 Identities = 136/213 (63%), Positives = 167/213 (78%)
 Frame = +3

Query: 36  SRIFVSSQVMPIRTHITPASSSKILSHSAKARLNSFTNNNDQNELSCIPTMLEIMNSSKS 215
           +R  +S  + P+     P   +   +H   + +    N N+   ++ +PTM E++ +SK+
Sbjct: 59  ARTHISCLITPVSYLSPPDQMTTTKTHFNSSNIQYEINTNNIKNVA-VPTMTEVLAASKA 117

Query: 216 QNVNIQLQTLGPFFRITATSLETNNELGKAEGIIRLWWGGKILHLDSVRLQRETLSMEKS 395
           QN+++QLQTLGPFFRITA SLET NELG+AEG+IR+W  GKILHLDS+RL+RETL MEKS
Sbjct: 118 QNLDLQLQTLGPFFRITAKSLETQNELGRAEGLIRVWLKGKILHLDSIRLRRETLGMEKS 177

Query: 396 IFGIGLFVGAVAIRYGYDCGCEIAELLAINDSDLYHSKLVRFYTRIGFKAVHEVTGSSIR 575
           IFGIGLF+GAVAIRYGYD GC+ AELLAINDSDLYHSKLVRFYTRIGFKAV+EVTGS+I 
Sbjct: 178 IFGIGLFIGAVAIRYGYDSGCKTAELLAINDSDLYHSKLVRFYTRIGFKAVYEVTGSTIG 237

Query: 576 DMVDMLVWGGYGTRMDADVTQLLIKWGRRFKEQ 674
           D+  MLVWGG GTRMDADV +LLIKW  RFK +
Sbjct: 238 DLPHMLVWGGIGTRMDADVEELLIKWCARFKSR 270


>ref|XP_002527519.1| conserved hypothetical protein [Ricinus communis]
           gi|223533159|gb|EEF34917.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  270 bits (691), Expect = 2e-70
 Identities = 128/177 (72%), Positives = 154/177 (87%)
 Frame = +3

Query: 147 NNNDQNELSCIPTMLEIMNSSKSQNVNIQLQTLGPFFRITATSLETNNELGKAEGIIRLW 326
           + N   ++  +PTM +I++SSK+Q +++QL+T+GPFFRITA SLET NELG+AEG+IR+W
Sbjct: 37  STNKTKDVIALPTMSDILSSSKAQKLDLQLKTVGPFFRITARSLETKNELGRAEGLIRVW 96

Query: 327 WGGKILHLDSVRLQRETLSMEKSIFGIGLFVGAVAIRYGYDCGCEIAELLAINDSDLYHS 506
             GKILHLDS+RL+RETL MEKSIFGIGLF+GAVAIRYG+DCGC +AELLAINDSDLYHS
Sbjct: 97  LRGKILHLDSIRLRRETLGMEKSIFGIGLFIGAVAIRYGHDCGCRVAELLAINDSDLYHS 156

Query: 507 KLVRFYTRIGFKAVHEVTGSSIRDMVDMLVWGGYGTRMDADVTQLLIKWGRRFKEQN 677
           KLVRFYTRIGFKAVHEVTGS+  D+  MLVWGG GTRMDA+V +LLIKW  RFK +N
Sbjct: 157 KLVRFYTRIGFKAVHEVTGSTTGDLAHMLVWGGVGTRMDAEVEELLIKWCTRFKHRN 213


>emb|CBI22453.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  268 bits (686), Expect = 7e-70
 Identities = 128/164 (78%), Positives = 147/164 (89%)
 Frame = +3

Query: 186 MLEIMNSSKSQNVNIQLQTLGPFFRITATSLETNNELGKAEGIIRLWWGGKILHLDSVRL 365
           M EIM+SS++QN+N+QLQTLGPFFRITA SLET  ELG+AEG+IR+W GG+ILHLDS+RL
Sbjct: 1   MSEIMDSSRAQNLNLQLQTLGPFFRITAKSLETQGELGRAEGLIRVWLGGRILHLDSIRL 60

Query: 366 QRETLSMEKSIFGIGLFVGAVAIRYGYDCGCEIAELLAINDSDLYHSKLVRFYTRIGFKA 545
           +RETL MEKSIFGIGLF+GAVAIRYGYD GC  AELLAINDSDLYHSKLVRFYTRIGFKA
Sbjct: 61  RRETLGMEKSIFGIGLFIGAVAIRYGYDSGCRTAELLAINDSDLYHSKLVRFYTRIGFKA 120

Query: 546 VHEVTGSSIRDMVDMLVWGGYGTRMDADVTQLLIKWGRRFKEQN 677
           VHEVTGSS+ D+  MLVWGG GTRMDA + +LL++W +RFK QN
Sbjct: 121 VHEVTGSSMGDLAHMLVWGGIGTRMDAKIEELLVRWCKRFKSQN 164


>ref|XP_003549567.1| PREDICTED: uncharacterized protein LOC100798071 [Glycine max]
          Length = 241

 Score =  256 bits (655), Expect = 3e-66
 Identities = 127/198 (64%), Positives = 158/198 (79%)
 Frame = +3

Query: 75  THITPASSSKILSHSAKARLNSFTNNNDQNELSCIPTMLEIMNSSKSQNVNIQLQTLGPF 254
           T I+P  +S  L    K R    + N   NE   +P+M EI+++S++Q +++QL+TLGPF
Sbjct: 43  TSISPHFNSNSLQ---KPRFPRASANATTNEAVIMPSMAEILDASRAQKLDLQLKTLGPF 99

Query: 255 FRITATSLETNNELGKAEGIIRLWWGGKILHLDSVRLQRETLSMEKSIFGIGLFVGAVAI 434
           FRITA S+ T  ELG+AEG++R W GGKILHLDS++LQRETL MEKSIFG+GLF+GAVAI
Sbjct: 100 FRITARSMVTGTELGRAEGLVRFWVGGKILHLDSIKLQRETLDMEKSIFGLGLFIGAVAI 159

Query: 435 RYGYDCGCEIAELLAINDSDLYHSKLVRFYTRIGFKAVHEVTGSSIRDMVDMLVWGGYGT 614
           R+GYD GC+ A+LLAINDSDLYHSKLVRFYTR+GFKAV+EVTGSS+ D+  MLVWGG GT
Sbjct: 160 RHGYDSGCKTAQLLAINDSDLYHSKLVRFYTRLGFKAVYEVTGSSVGDVGHMLVWGGVGT 219

Query: 615 RMDADVTQLLIKWGRRFK 668
           RMDA V +L+IKW  RFK
Sbjct: 220 RMDASVEELMIKWCTRFK 237


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