BLASTX nr result

ID: Coptis25_contig00027014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027014
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40057.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002270234.1| PREDICTED: uncharacterized protein LOC100266...    61   1e-07

>emb|CBI40057.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
 Frame = -1

Query: 357 PIIFKRGLRITAQPVLLIKIQPINKHGAFSSSRISLPKEASINKAGGESV----NKEYI- 193
           P+  KR  R TAQPVL +KIQP++K    SSSR +L KEAS++K GGESV    N+EY  
Sbjct: 142 PMNCKRSFRNTAQPVLFLKIQPVDKGRTSSSSRDNLLKEASLHKTGGESVSALINEEYAE 201

Query: 192 ----------DKDLPLPVIISPASEATEDSPHQEDASEPTTVSAGRGNG 76
                     D      + +S A ++    PHQ + +    V+   G G
Sbjct: 202 EAEITSSTDDDVSSHSSLAVSTAVQSNGGLPHQNEKNGSERVNNNTGGG 250


>ref|XP_002270234.1| PREDICTED: uncharacterized protein LOC100266440 [Vitis vinifera]
          Length = 1114

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
 Frame = -1

Query: 357 PIIFKRGLRITAQPVLLIKIQPINKHGAFSSSRISLPKEASINKAGGESV----NKEYID 190
           P+  KR  R TAQPVL +KIQP++K    SSSR +L KEAS++K GGESV    N+EY  
Sbjct: 142 PMNCKRSFRNTAQPVLFLKIQPVDKGRTSSSSRDNLLKEASLHKTGGESVSALINEEY-- 199

Query: 189 KDLPLPVIISPASEATEDSPHQEDASEPTTVSAGRG-NGIGSLPQEPE 49
                      A EA   S   +D S  ++++        G LP + E
Sbjct: 200 -----------AEEAEITSSTDDDVSSHSSLAVSTAVQSNGGLPHQNE 236


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