BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027008
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18266.3| unnamed protein product [Vitis vinifera]              411   e-112
gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   399   e-109
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ...   392   e-107
ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-l...   378   e-102
ref|XP_003576233.1| PREDICTED: uncharacterized protein LOC100835...   317   3e-84

>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  411 bits (1057), Expect = e-112
 Identities = 213/318 (66%), Positives = 254/318 (79%), Gaps = 21/318 (6%)
 Frame = +3

Query: 3    EILIDHF-----------KTKDSKNSRVIIFSNFRGSVRDIMNSLSSIGESVKATEFIGQ 149
            +ILIDHF           K  + +NSRVIIFSNFRGSVRDIM++L+ IGESVKAT+FIGQ
Sbjct: 503  DILIDHFRDEPHNTGSVHKANNPQNSRVIIFSNFRGSVRDIMDALAKIGESVKATQFIGQ 562

Query: 150  SSGKALKGQTQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDSNVSPLRMI 329
            SSGKA KGQ+QK+QQAVL+KFRAGG+N+IVATSIGEEGLDIMEVDLVICFD+N+SPLRMI
Sbjct: 563  SSGKASKGQSQKVQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANISPLRMI 622

Query: 330  QRMGRTGRKHDGRV---------VVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDF 482
            QRMGRTGRKHDGRV         +VLACEGSE+KGY+RKQANSK V KHM NGGMNSF+F
Sbjct: 623  QRMGRTGRKHDGRVDILLSFMLLLVLACEGSEMKGYMRKQANSKTVRKHMRNGGMNSFNF 682

Query: 483  HSSPRMIPHICKPEVQFVEFSIEQFVPRGKKVKDD-SFDDQAFKNKLSDAETELIAKYFS 659
            HSSPRMIPHI KPEVQFVE SIEQFVPRG+K KDD         +KL++ ETE++AKYF 
Sbjct: 683  HSSPRMIPHIFKPEVQFVELSIEQFVPRGRKGKDDHPIQAPISTDKLTNVETEVLAKYFG 742

Query: 660  SSGEYTWKPSLIAFPHFQAFPSRVHNVMHSFKTRMLIGTMQHLQALSFSMDDKVPPCEVQ 839
            ++G+ TW+PSLIAFP FQAFP+ VH + HSF+T +LI  MQHLQ LSFS + K     V+
Sbjct: 743  TTGKITWRPSLIAFPPFQAFPTGVHKIPHSFRTEILIDMMQHLQGLSFSGNSKT--FFVE 800

Query: 840  GMTSSYQCVGAESLTRHD 893
            G  S+ + +G E++ ++D
Sbjct: 801  GEVSTNEHLGVETVEQYD 818


>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
            thaliana]
          Length = 1344

 Score =  399 bits (1026), Expect = e-109
 Identities = 214/368 (58%), Positives = 267/368 (72%), Gaps = 11/368 (2%)
 Frame = +3

Query: 3    EILIDHFKTKDSKNSRVIIFSNFRGSVRDIMNSLSSIGESVKATEFIGQSSGKALKGQTQ 182
            EIL+DHFK KD K SRVIIFSNFRGSVRDIMN+LS+IG+ VKATEFIGQSSGK LKGQ+Q
Sbjct: 456  EILVDHFKVKDPKTSRVIIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQ 515

Query: 183  KIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDSNVSPLRMIQRMGRTGRKHD 362
            KIQQAVL+KFRAGG+N+IVATSIGEEGLDIMEVDLVICFD+NVSPLRMIQRMGRTGRK++
Sbjct: 516  KIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNN 575

Query: 363  GRVVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDFHSSPRMIPHICKPEVQFVEF 542
            GRVVVLACEGSE   Y+RKQA+ +A+ KHM NGG NSF+FH SPRMIPH+ KPEVQ VEF
Sbjct: 576  GRVVVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQHVEF 635

Query: 543  SIEQFVPRGKKVKDD-SFDDQAFKNKLSDAETELIAKYFSSSGEYTWKPSLIAFPHFQAF 719
            SI+QFVPRGKK++++ + +  AF+ KL+ AET ++AKY+++  E   + SLIAFPHFQ  
Sbjct: 636  SIKQFVPRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSLIAFPHFQTL 695

Query: 720  PSRVHNVMHSFKTRMLIGTMQHLQALSFSMDDK-------VPPCEVQGMTSSYQCVG--A 872
            PS+VH VMHS +T MLI  MQHLQ  +FS   K        P  E + + +  +      
Sbjct: 696  PSKVHKVMHSRQTGMLIDAMQHLQEPTFSEQSKSFFTEFRAPLGEREELDTGLRVTNDPK 755

Query: 873  ESLTRHDISEKDFEAVSGVIASPSAKHHISDSP-SQNCPIHFSHFENTYVSVKPSGTVSI 1049
            +  +  D+     +  +  + SP++    ++    ++ P H   F +   SV   G V +
Sbjct: 756  DLHSVRDLEVNTSQRKAKQVESPTSTLETTEKDYEESSPTHRYLFSSECASVDTLGNVFV 815

Query: 1050 AYVPSLPF 1073
              VP L F
Sbjct: 816  MPVPLLFF 823


>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
            gi|332193686|gb|AEE31807.1| fanconi anemia group M
            protein [Arabidopsis thaliana]
          Length = 1390

 Score =  392 bits (1008), Expect = e-107
 Identities = 212/369 (57%), Positives = 267/369 (72%), Gaps = 12/369 (3%)
 Frame = +3

Query: 3    EILIDHFKTKDSKNSRVIIFSNFRGSVRDIMNSLSSIGESVKATEFIGQSSGKALKGQTQ 182
            EIL+DHFK KD K SRVIIFSNFRGSVRDIMN+LS+IG+ VKATEFIGQSSGK LKGQ+Q
Sbjct: 454  EILVDHFKVKDPKTSRVIIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKGQSQ 513

Query: 183  KIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDSNVSPLRMIQRMGRTGRKHD 362
            KIQQAVL+KFRAGG+N+IVATSIGEEGLDIMEVDLVICFD+NVSPLRMIQRMGRTGRK++
Sbjct: 514  KIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNN 573

Query: 363  GR-VVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDFHSSPRMIPHICKPEVQFVE 539
            GR ++VLACEGSE   Y+RKQA+ +A+ KHM NGG NSF+FH SPRMIPH+ KPEVQ VE
Sbjct: 574  GRPLLVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQHVE 633

Query: 540  FSIEQFVPRGKKVKDD-SFDDQAFKNKLSDAETELIAKYFSSSGEYTWKPSLIAFPHFQA 716
            FSI+QFVPRGKK++++ + +  AF+ KL+ AET ++AKY+++  E   + SLIAFPHFQ 
Sbjct: 634  FSIKQFVPRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSLIAFPHFQT 693

Query: 717  FPSRVHNVMHSFKTRMLIGTMQHLQALSFSMDDK-------VPPCEVQGMTSSYQCVG-- 869
             PS+VH VMHS +T MLI  MQHLQ  +FS   K        P  E + + +  +     
Sbjct: 694  LPSKVHKVMHSRQTGMLIDAMQHLQEPTFSEQSKSFFTEFRAPLGEREELDTGLRVTNDP 753

Query: 870  AESLTRHDISEKDFEAVSGVIASPSAKHHISDSP-SQNCPIHFSHFENTYVSVKPSGTVS 1046
             +  +  D+     +  +  + SP++    ++    ++ P H   F +   SV   G V 
Sbjct: 754  KDLHSVRDLEVNTSQRKAKQVESPTSTLETTEKDYEESSPTHRYLFSSECASVDTLGNVF 813

Query: 1047 IAYVPSLPF 1073
            +  VP L F
Sbjct: 814  VMPVPLLFF 822


>ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max]
          Length = 1262

 Score =  378 bits (970), Expect = e-102
 Identities = 203/315 (64%), Positives = 240/315 (76%), Gaps = 8/315 (2%)
 Frame = +3

Query: 3    EILIDHFKTKDSKNSRVIIFSNFRGSVRDIMNSLSSIGESVKATEFIGQSSGKALKGQTQ 182
            ++L++HFKT D +NSRVIIFSN+R SVRDIMN+L  IGE VKATEFIGQSSGKA+KGQ+Q
Sbjct: 438  DVLLEHFKTNDPQNSRVIIFSNYRESVRDIMNALGDIGELVKATEFIGQSSGKAMKGQSQ 497

Query: 183  KIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDSNVSPLRMIQRMGRTGRKHD 362
            K+QQAVL+KFR+G YN+IVATSIGEEGLDIMEVDLVI FD+N+SPLRMIQRMGRTGRKHD
Sbjct: 498  KVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHD 557

Query: 363  GR-VVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDFHSSPRMIPHICKPEVQFVE 539
            GR ++V ACEG+ELKGYL+KQA SK ++KHM NGG+NSF FH SPRMIPH+ KPEV+ VE
Sbjct: 558  GRSLLVFACEGTELKGYLQKQAKSKTISKHMRNGGINSFTFHPSPRMIPHVLKPEVKCVE 617

Query: 540  FSIEQFVPRGKKVKDDSFDDQAFKNKLSDAETELIAKYFSSSGEYTWKPSLIAFPHFQAF 719
             SIE+F+PR K VKDD       K+KL+ AE +L+  YF  + E   + SLIAFPHFQ F
Sbjct: 618  LSIEKFIPRPKNVKDDELHISPSKDKLTVAEIDLLETYFHPTVENNSRMSLIAFPHFQTF 677

Query: 720  PSRVHNVMHSFKTRMLIGTMQHLQAL-SFSMDDKVPPCEVQGMTSSYQ---CVG---AES 878
            PSRVH V HS  T MLI  MQ LQ L SF  DDK         TSS Q   C+G     +
Sbjct: 678  PSRVHKVKHSSGTLMLIDMMQRLQGLVSFPEDDK---------TSSLQEDLCLGHGKPVT 728

Query: 879  LTRHDISEKDFEAVS 923
             T  D ++KD E+ S
Sbjct: 729  TTELDEAKKDNESCS 743


>ref|XP_003576233.1| PREDICTED: uncharacterized protein LOC100835661 [Brachypodium
            distachyon]
          Length = 1395

 Score =  317 bits (813), Expect = 3e-84
 Identities = 181/367 (49%), Positives = 244/367 (66%), Gaps = 11/367 (2%)
 Frame = +3

Query: 3    EILIDHFKTKDSKNSRVIIFSNFRGSVRDIMNSLSSIGESV-KATEFIGQSS-GKALKGQ 176
            E+L+DHF  K+ K+SRVIIFS++R SV++I+ +LS  G  + +  +FIGQ+S G  LKGQ
Sbjct: 511  EVLLDHFHKKNPKDSRVIIFSHYRESVKEILGALSDSGTGIFRPAQFIGQTSTGDRLKGQ 570

Query: 177  TQKIQQAVLQKFRAGGYNIIVATSIGEEGLDIMEVDLVICFDSNVSPLRMIQRMGRTGRK 356
            TQK+QQA+LQKFR+G YNI+VATSIGEEGLDIMEVDLVICFD+NVSPLRMIQRMGRTGRK
Sbjct: 571  TQKMQQAILQKFRSGEYNILVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRK 630

Query: 357  HDGRVVVLACEGSELKGYLRKQANSKAVNKHMHNGGMNSFDFHSSPRMIPHICKPEVQFV 536
            H+GRV +L+ +  EL+GY RKQ +++ +   +     + FD+H+SPRM+PH+ KPEV++V
Sbjct: 631  HEGRVDILSWQ--ELQGYTRKQGSTRTMKNLLRK--RDKFDYHASPRMVPHVYKPEVKYV 686

Query: 537  EFSIEQFVPRGKKVKDDSFDDQAFKNKLSDAETELIAKYFSSSGEYTWKPSLIAFPHFQA 716
            + SIE++VP  KK+K D+       NKLS+ + +LIA+YF +  E  WKPSL+AFP FQ 
Sbjct: 687  KLSIEKYVPHSKKIKVDASCVSPILNKLSEEDGQLIARYFIACKEDIWKPSLVAFPSFQV 746

Query: 717  FPSRVHNVMHSFKTR-MLIGTMQHLQALSFSMDDKVPPCEVQGMTSSYQCVGAESLTRHD 893
             P  ++ V HSF+T  ML+  MQ LQ LSFS              ++Y   G+      D
Sbjct: 747  SPCDIYKVPHSFRTTDMLVDAMQQLQDLSFST-----------TKNTYVQCGSPLRESAD 795

Query: 894  ISEKDFEA--------VSGVIASPSAKHHISDSPSQNCPIHFSHFENTYVSVKPSGTVSI 1049
            ++    +A         SG +A  S    +  SP    P+H S F   YV+V   G VSI
Sbjct: 796  VATVKDQAPEVECPYFSSGEVAL-SKSVCVPSSPVNKYPLH-SFFSGDYVTVDVGGFVSI 853

Query: 1050 AYVPSLP 1070
             +VP+LP
Sbjct: 854  TFVPALP 860