BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00027002
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   167   3e-39
ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|2...   163   6e-38
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   162   1e-37
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   162   1e-37
gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]                 148   2e-33

>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  167 bits (423), Expect = 3e-39
 Identities = 85/139 (61%), Positives = 103/139 (74%)
 Frame = -3

Query: 952 ERKIRQNINLSTDTVVVLFKSGLRASAFEIVRLLHNNGYFTKMEEVVGFLCQSRKYLEAR 773
           E KIRQNINLST TV +LF SGLR  AF+IV LL+ NGY   MEE++GFL  +RK+L A 
Sbjct: 579 EGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRKFLLAH 638

Query: 772 EMLLFCLEKHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIEKGNQPSLNCLGGLKDIL 593
           ++LLFCLEKHQNV ++M + VI GLCK KR +EAF LYYEL+EKGN   L CL  L+  L
Sbjct: 639 KLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVAL 698

Query: 592 ETEGRLDEAEFVLKRMNQK 536
           E  GRL+E +F+ KRM  K
Sbjct: 699 EARGRLEEVKFLSKRMPNK 717


>ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|222835144|gb|EEE73579.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  163 bits (412), Expect = 6e-38
 Identities = 81/136 (59%), Positives = 101/136 (74%)
 Frame = -3

Query: 952 ERKIRQNINLSTDTVVVLFKSGLRASAFEIVRLLHNNGYFTKMEEVVGFLCQSRKYLEAR 773
           +RKIRQNINLST T+ +LF SGLR  AF+IV LL++NGY   MEE++GF+CQ+ K L+A+
Sbjct: 520 DRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQ 579

Query: 772 EMLLFCLEKHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIEKGNQPSLNCLGGLKDIL 593
           +ML FCLEK  NV + + N VI GLCK KR  EAF LYY L+EK N   L+CL GL+  L
Sbjct: 580 KMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTAL 639

Query: 592 ETEGRLDEAEFVLKRM 545
           E  GR +EA+FV KRM
Sbjct: 640 EAGGRSEEAKFVSKRM 655


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  162 bits (410), Expect = 1e-37
 Identities = 82/136 (60%), Positives = 105/136 (77%)
 Frame = -3

Query: 952 ERKIRQNINLSTDTVVVLFKSGLRASAFEIVRLLHNNGYFTKMEEVVGFLCQSRKYLEAR 773
           ER+IRQNI+LST TV +L+KSGL+  AF  + LL+ NGY  KMEE+V FLCQSRK LEA+
Sbjct: 588 ERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQ 647

Query: 772 EMLLFCLEKHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIEKGNQPSLNCLGGLKDIL 593
           +MLLF LEK Q+V ++M + VI+GLCK  + +EAF+LYYEL+EKG Q  L C   L+  L
Sbjct: 648 KMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISL 707

Query: 592 ETEGRLDEAEFVLKRM 545
           E EGRL+EA+FV K+M
Sbjct: 708 EAEGRLNEAKFVSKKM 723


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  162 bits (410), Expect = 1e-37
 Identities = 82/136 (60%), Positives = 105/136 (77%)
 Frame = -3

Query: 952  ERKIRQNINLSTDTVVVLFKSGLRASAFEIVRLLHNNGYFTKMEEVVGFLCQSRKYLEAR 773
            ER+IRQNI+LST TV +L+KSGL+  AF  + LL+ NGY  KMEE+V FLCQSRK LEA+
Sbjct: 645  ERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQ 704

Query: 772  EMLLFCLEKHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIEKGNQPSLNCLGGLKDIL 593
            +MLLF LEK Q+V ++M + VI+GLCK  + +EAF+LYYEL+EKG Q  L C   L+  L
Sbjct: 705  KMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISL 764

Query: 592  ETEGRLDEAEFVLKRM 545
            E EGRL+EA+FV K+M
Sbjct: 765  EAEGRLNEAKFVSKKM 780


>gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
          Length = 691

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/136 (54%), Positives = 99/136 (72%)
 Frame = -3

Query: 952 ERKIRQNINLSTDTVVVLFKSGLRASAFEIVRLLHNNGYFTKMEEVVGFLCQSRKYLEAR 773
           E++IRQNI+LST  V +LF S  +  AF IVRLL++NGY  KMEE++G+LC++RK L+A 
Sbjct: 543 EKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAH 602

Query: 772 EMLLFCLEKHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIEKGNQPSLNCLGGLKDIL 593
            ++LFCLEK Q V ++  N VI GLCK KR +EAFSLY EL+E GN   L+C   L++ L
Sbjct: 603 TLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNAL 662

Query: 592 ETEGRLDEAEFVLKRM 545
           E  G+ +E +FV KRM
Sbjct: 663 EAAGKWEELQFVSKRM 678