BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026997
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32034.3| unnamed protein product [Vitis vinifera]              212   2e-53
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi...   212   2e-53
emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]   212   2e-53
ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago ...   195   4e-48

>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/143 (70%), Positives = 120/143 (83%)
 Frame = +3

Query: 6   NDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASM 185
           NDVL+N S++DMYCKCGSL+LA Q+F RM KRDVTSWN MILGF  HG+V  AL+ F  M
Sbjct: 250 NDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCM 309

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHYGCIVDLFARAG 365
              + LMPN+ITFVGVLSAC HGGLVSEGR YFD+MV EY+I+P++EHYGC+VDL ARAG
Sbjct: 310 VRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAG 369

Query: 366 LINEALDHVSLMSVKPDVVIWRS 434
           LI+EALD VS M ++PD+VIWRS
Sbjct: 370 LIDEALDVVSNMPMRPDLVIWRS 392



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 45/143 (31%), Positives = 67/143 (46%)
 Frame = +3

Query: 6   NDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASM 185
           +DV +NNS++  Y  C  LD A  VF RMS+R + SWN++I  F   G+   AL+ F  M
Sbjct: 161 SDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEM 220

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHYGCIVDLFARAG 365
                  P+  T   + +AC   G +S G      +V +  +         +VD++ + G
Sbjct: 221 QKF--FEPDGYTIQSIANACAGMGSLSLG------IVNDVLLNTS------LVDMYCKCG 266

Query: 366 LINEALDHVSLMSVKPDVVIWRS 434
            +  AL     M  K DV  W S
Sbjct: 267 SLELALQLFHRMP-KRDVTSWNS 288


>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Vitis vinifera]
          Length = 607

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/143 (70%), Positives = 120/143 (83%)
 Frame = +3

Query: 6   NDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASM 185
           NDVL+N S++DMYCKCGSL+LA Q+F RM KRDVTSWN MILGF  HG+V  AL+ F  M
Sbjct: 264 NDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCM 323

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHYGCIVDLFARAG 365
              + LMPN+ITFVGVLSAC HGGLVSEGR YFD+MV EY+I+P++EHYGC+VDL ARAG
Sbjct: 324 VRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAG 383

Query: 366 LINEALDHVSLMSVKPDVVIWRS 434
           LI+EALD VS M ++PD+VIWRS
Sbjct: 384 LIDEALDVVSNMPMRPDLVIWRS 406



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
 Frame = +3

Query: 6   NDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASM 185
           +DV +NNS++  Y  C  LD A  VF RMS+R + SWN++I  F   G+   AL+ F  M
Sbjct: 161 SDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEM 220

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIE--PQVEHYGCIVDLFAR 359
                  P+  T   + +AC   G +S G W    ++K++  +    V     +VD++ +
Sbjct: 221 QKF--FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCK 278

Query: 360 AGLINEALDHVSLMSVKPDVVIWRS 434
            G +  AL     M  K DV  W S
Sbjct: 279 CGSLELALQLFHRMP-KRDVTSWNS 302


>emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
          Length = 583

 Score =  212 bits (540), Expect = 2e-53
 Identities = 101/143 (70%), Positives = 120/143 (83%)
 Frame = +3

Query: 6   NDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASM 185
           NDVL+N S++DMYCKCGSL+LA Q+F RM KRDVTSWN MILGF  HG+V  AL+ F  M
Sbjct: 264 NDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCM 323

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHYGCIVDLFARAG 365
              + LMPN+ITFVGVLSAC HGGLVSEGR YFD+MV EY+I+P++EHYGC+VDL ARAG
Sbjct: 324 VRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAG 383

Query: 366 LINEALDHVSLMSVKPDVVIWRS 434
           LI+EALD VS M ++PD+VIWRS
Sbjct: 384 LIDEALDVVSNMPMRPDLVIWRS 406



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
 Frame = +3

Query: 6   NDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASM 185
           ++V +NNS++  Y  C  LD A  VF RMS+R + SWN++I  F   G+   AL+ F  M
Sbjct: 161 SBVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEM 220

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIE--PQVEHYGCIVDLFAR 359
                  P+  T   + +AC   G +S G W    ++K+   +    V     +VD++ +
Sbjct: 221 QKF--FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKXDADRVNDVLLNTSLVDMYCK 278

Query: 360 AGLINEALDHVSLMSVKPDVVIWRS 434
            G +  AL     M  K DV  W S
Sbjct: 279 CGSLELALQLFHRMP-KRDVTSWNS 302


>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/144 (67%), Positives = 117/144 (81%)
 Frame = +3

Query: 3   KNDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFAS 182
           ++ VLVNNS+LDMYCKCGSLD+A Q+F  M K DVTSWN MILGF MHG+ + AL+ F  
Sbjct: 263 RDHVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFER 322

Query: 183 MSNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHYGCIVDLFARA 362
           M  I   +PNSITFVGVLSAC H  +V+EGR YFD+MV EY+IEPQ+EHYGC+VD+ ARA
Sbjct: 323 MIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARA 382

Query: 363 GLINEALDHVSLMSVKPDVVIWRS 434
           GLI+EAL+ V+ M +KPDVVIWRS
Sbjct: 383 GLIDEALELVASMPMKPDVVIWRS 406



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
 Frame = +3

Query: 3   KNDVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFAS 182
           ++DV +NNS++  Y  CGSL+ A  VF +M +R + SWN MI  F + G+ + AL  F  
Sbjct: 158 QSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQ 217

Query: 183 MSNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHY---GCIVDLF 353
                   P+  T   V++AC     +S G W    +++   +    +H      ++D++
Sbjct: 218 FQQ-QFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMY 276

Query: 354 ARAGLINEALDHVSLMSVKPDVVIWRS 434
            + G ++ A      M  K DV  W S
Sbjct: 277 CKCGSLDIATQIFEGMQ-KHDVTSWNS 302


>ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
           gi|355515394|gb|AES97017.1| hypothetical protein
           MTR_5g044260 [Medicago truncatula]
          Length = 565

 Score =  195 bits (495), Expect = 4e-48
 Identities = 90/142 (63%), Positives = 111/142 (78%)
 Frame = +3

Query: 9   DVLVNNSVLDMYCKCGSLDLAHQVFRRMSKRDVTSWNLMILGFGMHGQVKEALDTFASMS 188
           DVLVN  ++DMYCKCGSL++A QVF  MS RDV+SWN +ILGF +HG+ K ALD F  M 
Sbjct: 223 DVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMV 282

Query: 189 NIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVKEYQIEPQVEHYGCIVDLFARAGL 368
            ++ ++PNSITFVGVLSAC H G+V EG  YF++M KEY +EP + HYGC+VDL+ARAG 
Sbjct: 283 KVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGH 342

Query: 369 INEALDHVSLMSVKPDVVIWRS 434
           I EAL+ VS M +KPD VIWRS
Sbjct: 343 IQEALNVVSEMPIKPDAVIWRS 364



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
 Frame = +3

Query: 9   DVLVNNSVLDMYCKCGSLDLAHQVFRRMSK-RDVTSWNLMILGFGMHGQVKEALDTFASM 185
           D  + NS++  Y  CG L+ A +VF RM + R+V SWN+MI  +   G     L  F  M
Sbjct: 119 DTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEM 178

Query: 186 SNIDGLMPNSITFVGVLSACKHGGLVSEGRWYFDLMVK--EYQIEPQVEHYGCIVDLFAR 359
             +    P+  T   V+ AC   G +S G W    ++K  +  +   V    C+VD++ +
Sbjct: 179 MKV--YEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCK 236

Query: 360 AGLINEALDHVSLMSVKPDVVIWRS 434
            G +  A      MS + DV  W S
Sbjct: 237 CGSLEIAKQVFEGMSYR-DVSSWNS 260