BLASTX nr result

ID: Coptis25_contig00026996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026996
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611987.1| hypothetical protein MTR_5g020060 [Medicago ...   112   7e-23
ref|XP_002866738.1| hypothetical protein ARALYDRAFT_496922 [Arab...   108   7e-22
ref|NP_201479.1| uncharacterized protein [Arabidopsis thaliana] ...   106   5e-21
dbj|BAJ85260.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   7e-20
ref|XP_002521599.1| conserved hypothetical protein [Ricinus comm...   102   7e-20

>ref|XP_003611987.1| hypothetical protein MTR_5g020060 [Medicago truncatula]
           gi|355513322|gb|AES94945.1| hypothetical protein
           MTR_5g020060 [Medicago truncatula]
          Length = 126

 Score =  112 bits (280), Expect = 7e-23
 Identities = 67/145 (46%), Positives = 85/145 (58%), Gaps = 1/145 (0%)
 Frame = -1

Query: 598 MLQALKVARCRPNILLNTQISS-IGRKTAVVQLPAQAKSVSTQSENQDKMSNAQNQSQKA 422
           ML  +K     P       +SS + R+T+ V+  ++A S         KM  AQ   QK+
Sbjct: 1   MLHTIKTVLTSPQTSFPRSLSSNLCRETSTVRFCSKADSAH-------KMDKAQ---QKS 50

Query: 421 NPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQRLPTHNEDHEVNAVHPHQPNH 242
           + + +    HGDVMSHSFGEGYATRS+EEGFGGIYG NQ L      HE         NH
Sbjct: 51  SSEKKETTEHGDVMSHSFGEGYATRSDEEGFGGIYGGNQSLQKDKSVHE---------NH 101

Query: 241 PEYDRSQGSDVKEKEKARNQPSVPA 167
           P+YD++QGS+VKEKEKAR+Q S  A
Sbjct: 102 PDYDKTQGSEVKEKEKARHQSSANA 126


>ref|XP_002866738.1| hypothetical protein ARALYDRAFT_496922 [Arabidopsis lyrata subsp.
           lyrata] gi|297312573|gb|EFH42997.1| hypothetical protein
           ARALYDRAFT_496922 [Arabidopsis lyrata subsp. lyrata]
          Length = 121

 Score =  108 bits (271), Expect = 7e-22
 Identities = 66/141 (46%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
 Frame = -1

Query: 598 MLQALKVARCRPN--ILLNTQISSIGRKTAVVQLPAQAKSVSTQSENQDKMSNAQNQSQK 425
           M+ ALK  R  P+  +   +  S +GRK   V       S +T S++Q KM         
Sbjct: 1   MINALKSIRSLPSNTVYFFSPPSRLGRKVTGV-------SFATASDDQQKMDK------- 46

Query: 424 ANPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQRLPTHNEDHEVNAVHPHQPN 245
             P++ +EK  GDVMSHS+GEGYATR +EEGFGG YG NQ L   NE HE         N
Sbjct: 47  -KPENPNEKT-GDVMSHSYGEGYATRCDEEGFGGTYGGNQTLQKENEIHE---------N 95

Query: 244 HPEYDRSQGSDVKEKEKARNQ 182
           HP+YD++QGS+ KEKEKARNQ
Sbjct: 96  HPDYDKTQGSEAKEKEKARNQ 116


>ref|NP_201479.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758128|dbj|BAB08620.1| unnamed protein product
           [Arabidopsis thaliana] gi|15081694|gb|AAK82502.1|
           AT5g66780/MUD21_2 [Arabidopsis thaliana]
           gi|18252267|gb|AAL62014.1| AT5g66780/MUD21_2
           [Arabidopsis thaliana] gi|332010879|gb|AED98262.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 121

 Score =  106 bits (264), Expect = 5e-21
 Identities = 66/145 (45%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
 Frame = -1

Query: 598 MLQALKVARCRPNILLNTQIS------SIGRKTAVVQLPAQAKSVSTQSENQDKMSNAQN 437
           M+ A K  R  P+   NT +S       +GRK   V       S +T S+ Q      +N
Sbjct: 1   MINAFKTIRSLPS---NTTVSFCSTPSRLGRKVTGV-------SFATTSDQQKMDKKPEN 50

Query: 436 QSQKANPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQRLPTHNEDHEVNAVHP 257
            ++K           GDVMSHS+GEGYATRS+EEGFGGIYG NQ L   NE HE      
Sbjct: 51  PNEKT----------GDVMSHSYGEGYATRSDEEGFGGIYGGNQTLQKENEIHE------ 94

Query: 256 HQPNHPEYDRSQGSDVKEKEKARNQ 182
              NHP+YD++QGS+ KEKEKARNQ
Sbjct: 95  ---NHPDYDKTQGSESKEKEKARNQ 116


>dbj|BAJ85260.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score =  102 bits (254), Expect = 7e-20
 Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
 Frame = -1

Query: 562 NILLNTQISSIGRKTAV-------VQLPAQAKSVSTQSENQDKMSNAQNQSQKANPQSQS 404
           N++     + +GR+ +V         +P         ++ Q  +  AQ   Q+ N    +
Sbjct: 36  NLVAPATAAQVGRRRSVSATSNAAAPVPGDQDFGMDPAKQQHHLPKAQAGEQQGNASEDT 95

Query: 403 EKV---HGDVMSHSFGEGYATRSEEEGFGGIYGDNQRLPTHNEDHEVNAVHPHQPNHPEY 233
            K    HGDVM+HSFGEGY+TRS+EEGFGG+YG N   P  N   E++      PNHPEY
Sbjct: 96  HKTTTAHGDVMTHSFGEGYSTRSDEEGFGGVYGQND--PVLNPGTEMH------PNHPEY 147

Query: 232 DRSQGSDVKEKEKARN 185
           D+SQGS+VKEKEKAR+
Sbjct: 148 DKSQGSEVKEKEKARH 163


>ref|XP_002521599.1| conserved hypothetical protein [Ricinus communis]
           gi|223539277|gb|EEF40870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score =  102 bits (254), Expect = 7e-20
 Identities = 54/100 (54%), Positives = 65/100 (65%)
 Frame = -1

Query: 481 STQSENQDKMSNAQNQSQKANPQSQSEKVHGDVMSHSFGEGYATRSEEEGFGGIYGDNQR 302
           S+  +N+  M  AQN ++K           GDVMSHSFGEGYATRS+EEGFGGIYG NQ 
Sbjct: 43  SSNPDNKHDMEKAQNPNEKT----------GDVMSHSFGEGYATRSDEEGFGGIYGGNQS 92

Query: 301 LPTHNEDHEVNAVHPHQPNHPEYDRSQGSDVKEKEKARNQ 182
           +     D E++       NHP YD SQGS+VKEKEKAR+Q
Sbjct: 93  VVKEETDKEIH------ENHPAYDTSQGSEVKEKEKARHQ 126


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