BLASTX nr result

ID: Coptis25_contig00026988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026988
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [S...   112   2e-23
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   112   4e-23
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...   111   6e-23
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...   107   8e-22
ref|XP_002464697.1| hypothetical protein SORBIDRAFT_01g023851 [S...   106   2e-21

>ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor]
           gi|241938714|gb|EES11859.1| hypothetical protein
           SORBIDRAFT_06g002845 [Sorghum bicolor]
          Length = 993

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/132 (39%), Positives = 79/132 (59%)
 Frame = -2

Query: 483 PILIIGDLNVILSENDKNGGKQYDIQDSYLAHDIIRNLGVLDLGFKGYPFTWTNKRIYPA 304
           PIL +GD+N +++ N+K G  + DI+   +  D ++  G LDLG+ G  +TWTNKR    
Sbjct: 162 PILAMGDMNELMNANEKCGSGKADIRRINMFCDYVKQCGFLDLGYSGPAYTWTNKRFSTT 221

Query: 303 NIQHRLDRALSSSEWQILFPDSTLYHLPIIESDHSPILLNTHPYFSHLHKPFKFHHMWID 124
               RLDR L+++EW + +P +T+YHLP+  SDH+PIL        H +K F+F + W+ 
Sbjct: 222 PTFQRLDRCLANAEWCMAYPRTTVYHLPMRRSDHAPILTMLDSTRHHNNKIFRFKNWWLM 281

Query: 123 HPDYQNVINNAW 88
             DY  V   +W
Sbjct: 282 EQDYMQVAKESW 293


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/138 (44%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -2

Query: 483 PILIIGDLNVILSENDKNGGKQYDIQDSYLAHDIIRNLGVLDLGFKGYPFTWTNKRIYPA 304
           P L+ GD+N +L  N+K GG+Q   +      D I    +LDLGF+G  FTWTN R   +
Sbjct: 133 PWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGS 192

Query: 303 NIQHRLDRALSSSEWQILFPDSTLYHLPIIESDHSP--ILLNTHPYFSHLHKPFKFHHMW 130
            I+ RLDRAL +SEW  LFPD+ + HLP   SDH P  IL N +P       PF+   +W
Sbjct: 193 LIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLILFNENPRSESF--PFRCKEVW 250

Query: 129 IDHPDYQNVINNAWHRVH 76
             HPD+ NVI   W   H
Sbjct: 251 AYHPDFTNVIEETWGSHH 268


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score =  111 bits (278), Expect = 6e-23
 Identities = 50/136 (36%), Positives = 81/136 (59%)
 Frame = -2

Query: 489 NKPILIIGDLNVILSENDKNGGKQYDIQDSYLAHDIIRNLGVLDLGFKGYPFTWTNKRIY 310
           N P+  +GDLN I+  ++K+G  + D++      D ++  G +DLG+ G  +TWTNKR  
Sbjct: 134 NMPMFCMGDLNNIMHPDEKSGPGRPDLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFS 193

Query: 309 PANIQHRLDRALSSSEWQILFPDSTLYHLPIIESDHSPILLNTHPYFSHLHKPFKFHHMW 130
                 RLDR L+++EW +++P +T+YHLP++ SDH+PIL        +  KPF+F + W
Sbjct: 194 TTPTFERLDRCLANAEWCMMYPRTTVYHLPMLRSDHTPILALLDSNTYNNTKPFRFENWW 253

Query: 129 IDHPDYQNVINNAWHR 82
           +   DY+     +W R
Sbjct: 254 LMEQDYEETAKKSWQR 269


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
 Frame = -2

Query: 471 IGDLNVILSENDKNGGKQYDIQDSYLAHDIIRNLGVLDLGFKGYPFTWTNKRIYPANIQH 292
           +GDLN I+ +N+K      +          I NLG++DLG+ G  +TW+NK+     +  
Sbjct: 1   MGDLNDIMYDNEKLSCSPVNSSRISQFPRHIHNLGLIDLGYNGPAYTWSNKKNGCDLVLE 60

Query: 291 RLDRALSSSEWQILFPDSTLYHLPIIESDHSPILLNTHPYFSHLHKPFKFHHMWIDHPDY 112
           RLDR L++ EW +LFP +T+YHLP++ SDH+PI+   +P   H  K FKF + WI   D+
Sbjct: 61  RLDRCLANVEWCMLFPHTTVYHLPMLYSDHAPIIAILNPIHHHPKKSFKFENWWISEKDF 120

Query: 111 QNVINNAWHRVHIPLLCPHQQS--FGKHLSSTKK 16
           Q      W  ++      H ++   GKHLS+  K
Sbjct: 121 QKEAQAGWSAINSNF---HSKAIHLGKHLSTWNK 151


>ref|XP_002464697.1| hypothetical protein SORBIDRAFT_01g023851 [Sorghum bicolor]
           gi|241918551|gb|EER91695.1| hypothetical protein
           SORBIDRAFT_01g023851 [Sorghum bicolor]
          Length = 527

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
 Frame = -2

Query: 519 WDPIRSLSIHNK--PILIIGDLNVILSENDKNGGKQYDIQDSYLAHDIIRNLGVLDLGFK 346
           WD + +  + N   P+L +GDLN ++  N+K G    D+   +     ++  G +DLG+ 
Sbjct: 167 WDNVLNFVVTNSNLPMLCMGDLNELMHANEKLGPNSADVNRIHEFCAYVKQCGFIDLGYS 226

Query: 345 GYPFTWTNKRIYPANIQHRLDRALSSSEWQILFPDSTLYHLPIIESDHSPILLNTHPYFS 166
           G  +TWTNKR        RLDR L ++EW + +P  T YHLP++ S H+PIL+  +    
Sbjct: 227 GPAYTWTNKRFSSTPTFERLDRCLGNAEWCLTYPTITTYHLPMMYSGHAPILVVLNSLRP 286

Query: 165 HLHKPFKFHHMWIDHPDYQNVINNAW 88
             +KPF+F + W+   +Y  +   +W
Sbjct: 287 RANKPFRFENWWLMKQEYHVIAKQSW 312


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