BLASTX nr result
ID: Coptis25_contig00026981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00026981
(279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selag... 93 3e-17
ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selag... 93 3e-17
ref|XP_002319601.1| predicted protein [Populus trichocarpa] gi|2... 91 7e-17
ref|XP_003620148.1| Pentatricopeptide repeat-containing protein ... 90 2e-16
ref|XP_003620118.1| Pentatricopeptide repeat protein-like protei... 89 4e-16
>ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein
SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 92.8 bits (229), Expect = 3e-17
Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCK---QGRIKEAFEVFQEMYQKGLKPTVFTYNALIDG 107
F +ML V P VVT+NILVD LCK +GRIKEA +F M +KG P V TY+ALIDG
Sbjct: 421 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 480
Query: 106 LYTSGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
L +GK DA RL M +G +PN +TY +I
Sbjct: 481 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513
Score = 77.4 bits (189), Expect = 1e-12
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Frame = -3
Query: 274 SQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTS 95
S M ++ SP+ ++FN L+ C+ G+ K+A F+EM ++G+KPTV TYN L+DGL +
Sbjct: 387 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA 446
Query: 94 ---GKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
G+ K+AI LF+ M +G +P+ TY +ID
Sbjct: 447 RQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 479
Score = 75.9 bits (185), Expect = 3e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F +L + P+V T+NIL+D L K+ R+ EAFE+F + + GL+P TY IDGL
Sbjct: 281 FGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 340
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+G+ +DA+ + +M +G +P+ ++ +I+
Sbjct: 341 AGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371
Score = 72.4 bits (176), Expect = 4e-11
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F M+ + PDVVT++ L+D L K G++ +A + M KG P V+TYN+LI GL
Sbjct: 459 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 518
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIIDA 2
K +A+ LF M +G +P+ TYG II A
Sbjct: 519 LDKVDEALELFVAMVEKGCVPDTITYGTIISA 550
Score = 71.2 bits (173), Expect = 8e-11
Identities = 32/91 (35%), Positives = 53/91 (58%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
+ +M+ SPDVVT+N L+ CK G++ EA ++F ++G P V TYNALI+G
Sbjct: 108 YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCK 167
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ K +A R+ M ++P+ TY +++
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVVTYNSLVN 198
Score = 67.8 bits (164), Expect = 9e-10
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = -3
Query: 247 PDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRL 68
PDVV+ N +++ LCK+ R+ EA + M KG P ++N LI G +GK K A+
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420
Query: 67 FNEMTGRGILPNGHTYGIIID 5
F EM RG+ P TY I++D
Sbjct: 421 FKEMLKRGVKPTVVTYNILVD 441
Score = 66.6 bits (161), Expect = 2e-09
Identities = 29/90 (32%), Positives = 54/90 (60%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
FS ++ + PD +T+ + +D LCK GR+++A + ++M +KG P V ++NA+I+GL
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
+ +A L + M +G PN ++ +I
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLI 405
Score = 66.2 bits (160), Expect = 3e-09
Identities = 30/89 (33%), Positives = 52/89 (58%)
Frame = -3
Query: 271 QMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSG 92
+M+ PD+V++N L+ L ++ + EA ++F + ++G +P V TYN LIDGL
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 91 KGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ +A LF+ + G+ P+ TY + ID
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFID 336
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/91 (32%), Positives = 50/91 (54%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F M P+ +T+N L+ LC GR+ +A +++ M + G P V TYN L+ G
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
GK +A+++F+ RG +P+ TY +I+
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALIN 163
Score = 63.5 bits (153), Expect = 2e-08
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 33/122 (27%)
Frame = -3
Query: 271 QMLSENVSPDVVTFNILVDSLCKQGRIKEAF----------------------------- 179
+M+SE++ PDVVT+N LV+ LCK GR+ EA
Sbjct: 180 RMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRL 239
Query: 178 ----EVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPNGHTYGII 11
++ ++M G KP + +YNALI GL +A++LF + +G P TY I+
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL 299
Query: 10 ID 5
ID
Sbjct: 300 ID 301
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F + PDVVT+N L++ CK ++ EA + Q M + L P V TYN+L++GL
Sbjct: 143 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK 202
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
+G+ +A L + +G PN TY +I
Sbjct: 203 NGRVDEARML---IVDKGFSPNVITYSTLI 229
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = -3
Query: 244 DVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRLF 65
D+ TFNI + LC+ RI +A VF M + G P TYNAL+ GL G+ DA L+
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 64 NEMTGRGILPNGHTYGIII 8
M G P+ TY ++
Sbjct: 109 ERMIKAGYSPDVVTYNTLL 127
>ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein
SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 92.8 bits (229), Expect = 3e-17
Identities = 49/93 (52%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCK---QGRIKEAFEVFQEMYQKGLKPTVFTYNALIDG 107
F +ML V P VVT+NILVD LCK +GRIKEA +F M +KG P V TY+ALIDG
Sbjct: 311 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 370
Query: 106 LYTSGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
L +GK DA RL M +G +PN +TY +I
Sbjct: 371 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403
Score = 77.4 bits (189), Expect = 1e-12
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Frame = -3
Query: 274 SQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTS 95
S M ++ SP+ ++FN L+ C+ G+ K+A F+EM ++G+KPTV TYN L+DGL +
Sbjct: 277 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA 336
Query: 94 ---GKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
G+ K+AI LF+ M +G +P+ TY +ID
Sbjct: 337 RQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 369
Score = 76.3 bits (186), Expect = 2e-12
Identities = 33/91 (36%), Positives = 57/91 (62%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F +L + P+V T+NIL+D L K+ R+ EAFE+F + + GL+P TY IDGL
Sbjct: 171 FGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 230
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+G+ +DA+ + +M +G +P+ ++ +I+
Sbjct: 231 AGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261
Score = 72.0 bits (175), Expect = 5e-11
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F M+ + PDVVT++ L+D L K G++ +A + M KG P V+TYN+LI GL
Sbjct: 349 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCG 408
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIIDA 2
K +A+ LF M +G +P+ TYG II A
Sbjct: 409 LEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 70.5 bits (171), Expect = 1e-10
Identities = 32/91 (35%), Positives = 52/91 (57%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
+ +M+ SPDVVT+N L+ CK G + EA ++F ++G P V TYNALI+G
Sbjct: 33 YERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCK 92
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ K +A R+ M ++P+ TY +++
Sbjct: 93 ADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123
Score = 68.2 bits (165), Expect = 7e-10
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Frame = -3
Query: 271 QMLSENVSPDVVTFNILVDSLCKQGRI--------------------------------- 191
+M+SEN+ PDVVT+N LV+ LCK GR+
Sbjct: 105 RMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGV 164
Query: 190 KEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRLFNEMTGRGILPNGHTYGII 11
EA ++F + ++G +P V TYN LIDGL + +A LF+ + G+ P+ TY +
Sbjct: 165 SEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 224
Query: 10 ID 5
ID
Sbjct: 225 ID 226
Score = 67.8 bits (164), Expect = 9e-10
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = -3
Query: 247 PDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRL 68
PDVV+ N +++ LCK+ R+ EA + M KG P ++N LI G +GK K A+
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 310
Query: 67 FNEMTGRGILPNGHTYGIIID 5
F EM RG+ P TY I++D
Sbjct: 311 FKEMLKRGVKPTVVTYNILVD 331
Score = 66.6 bits (161), Expect = 2e-09
Identities = 29/90 (32%), Positives = 54/90 (60%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
FS ++ + PD +T+ + +D LCK GR+++A + ++M +KG P V ++NA+I+GL
Sbjct: 206 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 265
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
+ +A L + M +G PN ++ +I
Sbjct: 266 EKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F + PDVVT+N L++ CK ++ EA + Q M + L P V TYN+L++GL
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
+G+ +A L + +G PN TY +I
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLI 154
Score = 61.2 bits (147), Expect = 8e-08
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = -3
Query: 247 PDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRL 68
P+ +T+N L+ LC GR+ +A +++ M + G P V TYN L+ G G+ +A+++
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 67 FNEMTGRGILPNGHTYGIIID 5
F+ RG +P+ TY +I+
Sbjct: 68 FDGAVKRGFVPDVVTYNALIN 88
>ref|XP_002319601.1| predicted protein [Populus trichocarpa] gi|222857977|gb|EEE95524.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 91.3 bits (225), Expect = 7e-17
Identities = 44/91 (48%), Positives = 62/91 (68%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F QM+ NV P+ VTF IL+D LCK+ I EA+ VF+ M +KGL+P V+TYNAL+DG +
Sbjct: 138 FKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCS 197
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ +A +LFN M +G PN +Y I+I+
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILIN 228
Score = 78.2 bits (191), Expect = 6e-13
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = -3
Query: 271 QMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSG 92
+M + P+VV +N ++DSLCK + EA + F EM ++G+ P VFTY++++ G G
Sbjct: 70 KMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLG 129
Query: 91 KGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ +A LF +M R ++PN T+ I+ID
Sbjct: 130 RVNEATSLFKQMVERNVIPNKVTFTILID 158
Score = 76.6 bits (187), Expect = 2e-12
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = -3
Query: 268 MLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGK 89
M + P++ + IL++ +C G+++ A E+F ++ KG++PTV TY +I GL G
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375
Query: 88 GKDAIRLFNEMTGRGILPNGHTYGIII 8
+A LF EM G LPN TY +II
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVII 402
Score = 73.6 bits (179), Expect = 2e-11
Identities = 37/91 (40%), Positives = 55/91 (60%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F+ M + +P+V ++NIL++ CK GRI EA + EM K L P +FTY+ L+ G
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQ 267
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
G+ ++A L EM G+LPN TY I++D
Sbjct: 268 VGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Score = 72.8 bits (177), Expect = 3e-11
Identities = 33/88 (37%), Positives = 57/88 (64%)
Frame = -3
Query: 271 QMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSG 92
+M S + P+++T++I++D LCK G + EAFE+ + M + ++P +F Y LI+G+ T G
Sbjct: 280 EMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG 339
Query: 91 KGKDAIRLFNEMTGRGILPNGHTYGIII 8
K + A LF+ + +GI P TY ++I
Sbjct: 340 KLEAARELFSNLFVKGIQPTVVTYTVMI 367
Score = 68.9 bits (167), Expect = 4e-10
Identities = 32/90 (35%), Positives = 51/90 (56%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F +M+ PDV+T++ +++ LCK G A ++ ++M +KG KP V YN +ID L
Sbjct: 33 FDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCK 92
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
+A+ F+EM GI P+ TY I+
Sbjct: 93 DRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122
Score = 68.6 bits (166), Expect = 5e-10
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
FS + + + P VVT+ +++ L K G EA E+F+EM G P TYN +I G
Sbjct: 348 FSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLR 407
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+G +A+RL EM G+G + T+ ++ D
Sbjct: 408 NGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
Score = 67.4 bits (163), Expect = 1e-09
Identities = 33/89 (37%), Positives = 51/89 (57%)
Frame = -3
Query: 268 MLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGK 89
M + P +VTFN L+ LC + +I +A ++F EM + G +P V TY+ +I+GL G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 88 GKDAIRLFNEMTGRGILPNGHTYGIIIDA 2
A++L +M +G PN Y IID+
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDS 89
Score = 64.7 bits (156), Expect = 7e-09
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F M + + PDV T+N LVD C + ++ EA ++F M +KG P V +YN LI+G
Sbjct: 173 FETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCK 232
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
SG+ +A L EM+ + + P+ TY ++
Sbjct: 233 SGRIDEAKGLLAEMSHKSLTPDIFTYSTLM 262
Score = 61.2 bits (147), Expect = 8e-08
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = -3
Query: 274 SQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTS 95
++M ++++PD+ T++ L+ C+ GR +EA E+ +EM GL P + TY+ ++DGL
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 94 GKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
G +A L M I PN Y I+I+
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIE 333
>ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago
truncatula] gi|355495163|gb|AES76366.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 465
Score = 90.1 bits (222), Expect = 2e-16
Identities = 40/91 (43%), Positives = 61/91 (67%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F++M+SEN+ PDV TFNILVD CK G+I A ++ EM+ +G P + TY++++D L
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ + A+ L ++ +GI PN HTY I+ID
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILID 375
Score = 86.7 bits (213), Expect = 2e-15
Identities = 36/83 (43%), Positives = 57/83 (68%)
Frame = -3
Query: 253 VSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAI 74
V P+VV ++ ++D +CK + +AF+++ EM KG+ P V TY+ALI G +T GK KDA+
Sbjct: 223 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAV 282
Query: 73 RLFNEMTGRGILPNGHTYGIIID 5
LFN+M I P+ +T+ I++D
Sbjct: 283 DLFNKMISENIKPDVYTFNILVD 305
Score = 78.6 bits (192), Expect = 5e-13
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
+S+M+S+ +SP+VVT++ L+ G++K+A ++F +M + +KP V+T+N L+D
Sbjct: 250 YSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCK 309
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIIDA 2
SGK A++L +EM RG PN TY I+DA
Sbjct: 310 SGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341
Score = 58.9 bits (141), Expect = 4e-07
Identities = 26/88 (29%), Positives = 50/88 (56%)
Frame = -3
Query: 274 SQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTS 95
+++ + + P++ T+ IL+D LC G++++A +F+++ KG TV TY + G
Sbjct: 356 TKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKK 415
Query: 94 GKGKDAIRLFNEMTGRGILPNGHTYGII 11
G +A L ++M G +P+ TY +I
Sbjct: 416 GLFDEASALLSKMEENGCIPDAKTYELI 443
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/91 (30%), Positives = 48/91 (52%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F+++L +P+ +TF L+ LC +G+I +A ++ G + +Y LIDGL
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
G+ + A+ L + G+ + PN Y IID
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIID 235
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/89 (31%), Positives = 46/89 (51%)
Frame = -3
Query: 271 QMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSG 92
+M + P++V NIL++ C+ G I AF VF ++ + G P T+ LI GL G
Sbjct: 112 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKG 171
Query: 91 KGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ A+ +++ G N +YG +ID
Sbjct: 172 QIHQALNFHDKLVALGFQFNQISYGTLID 200
>ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat
protein-like protein [Medicago truncatula]
Length = 841
Score = 89.0 bits (219), Expect = 4e-16
Identities = 39/83 (46%), Positives = 57/83 (68%)
Frame = -3
Query: 253 VSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAI 74
V PDVV +N ++D +CK + +AF+++ E K + P VFTYNALI G GK KDAI
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 73 RLFNEMTGRGILPNGHTYGIIID 5
LFN+MT + I+P+ +T+ I++D
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVD 411
Score = 81.6 bits (200), Expect = 6e-14
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F++M S+N+ PDV TF+ILVD CK G IKEA V M ++ +KP V TY++L+DG
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
+ A +FN M+ RG+ N +Y I+I+
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMIN 481
Score = 79.0 bits (193), Expect = 4e-13
Identities = 35/90 (38%), Positives = 57/90 (63%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F +M + + PDV+T++ L+D LCK GRI A E+ EM+ +G +P + TYN+++D L
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIII 8
AI L ++ G+GI P+ +TY I++
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILV 585
Score = 72.0 bits (175), Expect = 5e-11
Identities = 37/92 (40%), Positives = 58/92 (63%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
F+ M V+ +V ++NI+++ CK + EA ++F+EM+ K + P V TY++LIDGL
Sbjct: 461 FNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCK 520
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIIDA 2
SG+ A+ L +EM RG P+ TY I+DA
Sbjct: 521 SGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Score = 67.4 bits (163), Expect = 1e-09
Identities = 30/91 (32%), Positives = 54/91 (59%)
Frame = -3
Query: 277 FSQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYT 98
+S+ +S+ + PDV T+N L+ C G++K+A ++F +M K + P V+T++ L+DG
Sbjct: 356 YSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCK 415
Query: 97 SGKGKDAIRLFNEMTGRGILPNGHTYGIIID 5
G K+A + M + I P+ TY ++D
Sbjct: 416 DGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Score = 65.5 bits (158), Expect = 4e-09
Identities = 29/89 (32%), Positives = 53/89 (59%)
Frame = -3
Query: 274 SQMLSENVSPDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTS 95
+++ + + PD+ T+ ILV LC+ G++++A +VF+++ KG V+ Y +I G
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDK 626
Query: 94 GKGKDAIRLFNEMTGRGILPNGHTYGIII 8
G +A+ L ++M G +P+ TY III
Sbjct: 627 GLFDEALALLSKMEENGCIPDAKTYEIII 655
Score = 60.1 bits (144), Expect = 2e-07
Identities = 25/80 (31%), Positives = 52/80 (65%)
Frame = -3
Query: 247 PDVVTFNILVDSLCKQGRIKEAFEVFQEMYQKGLKPTVFTYNALIDGLYTSGKGKDAIRL 68
PD++T+N ++D+LCK+ + +A + ++ +G++P + TY L+ GL SGK +DA ++
Sbjct: 541 PDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV 600
Query: 67 FNEMTGRGILPNGHTYGIII 8
F ++ +G + + Y ++I
Sbjct: 601 FEDLLVKGYNLDVYAYTVMI 620