BLASTX nr result

ID: Coptis25_contig00026961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026961
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530669.1| RNA splicing protein mrs2, mitochondrial, pu...    62   4e-08
ref|NP_567076.1| magnesium transporter MRS2-4 [Arabidopsis thali...    61   8e-08
emb|CAB86925.1| putative protein [Arabidopsis thaliana]                61   8e-08
ref|XP_002878249.1| hypothetical protein ARALYDRAFT_907386 [Arab...    60   2e-07
ref|XP_003525004.1| PREDICTED: magnesium transporter MRS2-4-like...    58   7e-07

>ref|XP_002530669.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus
           communis] gi|223529762|gb|EEF31700.1| RNA splicing
           protein mrs2, mitochondrial, putative [Ricinus communis]
          Length = 453

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = -1

Query: 115 GSRLWMRFNRLGETEVVECEKNAIIKCVSIPARDLRIL 2
           G+RLWMRF+RLG +E++EC+K+ IIK VSIPARDLRIL
Sbjct: 69  GARLWMRFDRLGNSELMECDKSVIIKRVSIPARDLRIL 106


>ref|NP_567076.1| magnesium transporter MRS2-4 [Arabidopsis thaliana]
           gi|75163756|sp|Q93ZD7.1|MRS24_ARATH RecName:
           Full=Magnesium transporter MRS2-4; AltName:
           Full=Magnesium Transporter 6; Short=AtMGT6
           gi|16209702|gb|AAL14408.1| AT3g58970/F17J16_20
           [Arabidopsis thaliana] gi|25090327|gb|AAN72277.1|
           At3g58970/F17J16_20 [Arabidopsis thaliana]
           gi|25360850|gb|AAN73214.1| MRS2-4 [Arabidopsis thaliana]
           gi|332646334|gb|AEE79855.1| magnesium transporter MRS2-4
           [Arabidopsis thaliana]
          Length = 436

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/67 (49%), Positives = 39/67 (58%)
 Frame = -1

Query: 202 PNQPPPLSPLIDNXXXXXXXXXXXXXXXSGSRLWMRFNRLGETEVVECEKNAIIKCVSIP 23
           P+ PPP  P I                  G+RLWMRF+R G  EVVEC+K+ IIK  S+P
Sbjct: 33  PSSPPPPLP-IHAGGSAVGATGKAKKKTGGARLWMRFDRTGAMEVVECDKSTIIKRASVP 91

Query: 22  ARDLRIL 2
           ARDLRIL
Sbjct: 92  ARDLRIL 98


>emb|CAB86925.1| putative protein [Arabidopsis thaliana]
          Length = 463

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/67 (49%), Positives = 39/67 (58%)
 Frame = -1

Query: 202 PNQPPPLSPLIDNXXXXXXXXXXXXXXXSGSRLWMRFNRLGETEVVECEKNAIIKCVSIP 23
           P+ PPP  P I                  G+RLWMRF+R G  EVVEC+K+ IIK  S+P
Sbjct: 49  PSSPPPPLP-IHAGGSAVGATGKAKKKTGGARLWMRFDRTGAMEVVECDKSTIIKRASVP 107

Query: 22  ARDLRIL 2
           ARDLRIL
Sbjct: 108 ARDLRIL 114


>ref|XP_002878249.1| hypothetical protein ARALYDRAFT_907386 [Arabidopsis lyrata subsp.
           lyrata] gi|297324087|gb|EFH54508.1| hypothetical protein
           ARALYDRAFT_907386 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/67 (47%), Positives = 39/67 (58%)
 Frame = -1

Query: 202 PNQPPPLSPLIDNXXXXXXXXXXXXXXXSGSRLWMRFNRLGETEVVECEKNAIIKCVSIP 23
           P+ PPP  P I+                 G+R WMRF+R G  EVVEC+K+ IIK  S+P
Sbjct: 33  PSSPPPPLP-INAGGPIVGGAGKAKKKTGGARWWMRFDRTGAMEVVECDKSTIIKRASVP 91

Query: 22  ARDLRIL 2
           ARDLRIL
Sbjct: 92  ARDLRIL 98


>ref|XP_003525004.1| PREDICTED: magnesium transporter MRS2-4-like [Glycine max]
          Length = 451

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = -1

Query: 115 GSRLWMRFNRLGETEVVECEKNAIIKCVSIPARDLRIL 2
           G+RLWMRF+R G +E+VE EKNAII+  +IPARDLRIL
Sbjct: 68  GARLWMRFDRSGRSELVELEKNAIIRHAAIPARDLRIL 105


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