BLASTX nr result

ID: Coptis25_contig00026953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026953
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34149.1| unknown [Lotus japonicus]                               60   3e-07
gb|ACU24197.1| unknown [Glycine max]                                   59   3e-07
ref|XP_003545396.1| PREDICTED: uncharacterized protein LOC100798...    58   7e-07
ref|XP_002873566.1| hypothetical protein ARALYDRAFT_488082 [Arab...    58   1e-06
ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258...    58   1e-06

>gb|AFK34149.1| unknown [Lotus japonicus]
          Length = 184

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -2

Query: 380 QNQNLDFHHEGPASNKMTSSMFKDSQKKV--SSGRKQLQDFSNCSSIHQEASTRMSNF-S 210
           ++ NLD H +    N  + +   D +K     SGRK L D SN +S   E S +  N   
Sbjct: 13  KDDNLDIHPKKAGFNVKSKNSKLDGKKGGLGKSGRKALNDISNKTSRQTETSVQKKNLPK 72

Query: 209 EDFNVAEEGFLHDHSMCIAAQKAQM 135
           ED N+ EE FLHDH  CI AQKA M
Sbjct: 73  EDVNIKEEMFLHDHKKCIEAQKAAM 97


>gb|ACU24197.1| unknown [Glycine max]
          Length = 181

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -2

Query: 380 QNQNLDFHHEGPASNKMTSSMFKDSQKKVSSGRKQLQDFSNCSSIHQ-EASTRMSNF-SE 207
           +++NL+ H +    +K + +  K     ++ GRK L D +N SS+H  EAS R  N   +
Sbjct: 13  KDENLNLHSKKTTKSKNSKTNGKKDGSGIA-GRKALNDITNKSSLHHPEASVRKRNLPKQ 71

Query: 206 DFNVAEEGFLHDHSMCIAAQKAQM 135
           D NV EE FLHDH  CI AQ A M
Sbjct: 72  DINVKEEMFLHDHKKCIEAQNATM 95


>ref|XP_003545396.1| PREDICTED: uncharacterized protein LOC100798738 [Glycine max]
          Length = 181

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -2

Query: 380 QNQNLDFHHEGPASNKMTSSMFKDSQKKVSSGRKQLQDFSNCSSIHQ-EASTRMSNF-SE 207
           +++NL+ H +    +K + +  K     ++ GRK L D +N SS+H  EAS +  N   +
Sbjct: 13  KDENLNLHSKKTTKSKNSKTNGKKDGSGIA-GRKALNDITNKSSLHHPEASVKKRNLPKQ 71

Query: 206 DFNVAEEGFLHDHSMCIAAQKAQM 135
           D NV EE FLHDH  CI AQ A M
Sbjct: 72  DINVKEEMFLHDHKKCIEAQNATM 95


>ref|XP_002873566.1| hypothetical protein ARALYDRAFT_488082 [Arabidopsis lyrata subsp.
           lyrata] gi|297319403|gb|EFH49825.1| hypothetical protein
           ARALYDRAFT_488082 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
 Frame = -2

Query: 383 FQNQNLDFHH--EGPASNKMTSSMFKDSQKKVSSG---RKQLQDFSNCSSIHQEASTRMS 219
           FQ++N    H  +  A+ K  SS+   + KK  +G   RK L D +N S +  +AS++  
Sbjct: 12  FQDENALAAHGKKAVAAGKGKSSL--PAPKKNGTGFGNRKALHDITNKSKLQPQASSKTK 69

Query: 218 NFSE--DFNVAEEGFLHDHSMCIAAQKAQMEQDHYSAFLFDHGLLDSDISE---SSSNAK 54
              E  DF++A+EGFLHDHS CI  Q+      ++S  +  HG  D++I+E     +N+K
Sbjct: 70  KNVEGVDFDIAKEGFLHDHSKCIEEQQQNQWDSYFSEHIILHG-HDTNINEGVPEYNNSK 128

Query: 53  E 51
           E
Sbjct: 129 E 129


>ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258543 [Vitis vinifera]
           gi|296083837|emb|CBI24225.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
 Frame = -2

Query: 314 KDSQKKVSS--GRKQLQDFSNCSSIHQEASTRMSNF-SEDFNVAEEGFLHDHSMCIAAQK 144
           K + KK      RK L + +N S++H E S +  +   E+FN+AEE FLHDH  CI AQK
Sbjct: 34  KTTAKKAGGLGNRKALDNITNKSTLHHETSLKKKHLPKEEFNIAEERFLHDHKKCIEAQK 93

Query: 143 AQMEQDHYSAFLFDHGLLDSDISESSSNAK 54
           A  E       L  HG    ++S+S S+A+
Sbjct: 94  AATEPCFLDIVLPGHG-NHINLSDSISHAE 122


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