BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026949
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   219   2e-55
ref|XP_002534810.1| NADH dehydrogenase, putative [Ricinus commun...   217   7e-55
ref|YP_003587227.1| NADH dehydrogenase subunit 2 [Citrullus lana...   216   1e-54
sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct...   215   3e-54
ref|YP_717099.1| NADH dehydrogenase subunit 2 [Brassica napus] g...   215   3e-54

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  219 bits (558), Expect = 2e-55
 Identities = 113/123 (91%), Positives = 115/123 (93%)
 Frame = -2

Query: 369 KTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQ 190
           K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFAN+ RV IYGSYGATLQQ
Sbjct: 500 KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQ 559

Query: 189 IFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIY 10
           IF FCSIASMILGALAAMAQTKVKR LA+SSIGHVGYI  GFSCGTIEGIQSLLIGIFIY
Sbjct: 560 IFCFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIY 619

Query: 9   VLM 1
            LM
Sbjct: 620 ALM 622


>ref|XP_002534810.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223524538|gb|EEF27573.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 214

 Score =  217 bits (553), Expect = 7e-55
 Identities = 111/123 (90%), Positives = 115/123 (93%)
 Frame = -2

Query: 369 KTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQ 190
           K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI AN+ RV IYGSYGATLQQ
Sbjct: 1   KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQ 60

Query: 189 IFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIY 10
           IFFFCSIASMILG+LAAMAQTKVKR LA+SSIGHVGYI  GFSCGTIEGIQSLLIG+FIY
Sbjct: 61  IFFFCSIASMILGSLAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIY 120

Query: 9   VLM 1
            LM
Sbjct: 121 ALM 123


>ref|YP_003587227.1| NADH dehydrogenase subunit 2 [Citrullus lanatus]
           gi|259156771|gb|ACV96633.1| NADH dehydrogenase subunit 2
           [Citrullus lanatus]
          Length = 488

 Score =  216 bits (551), Expect = 1e-54
 Identities = 108/115 (93%), Positives = 112/115 (97%)
 Frame = -2

Query: 345 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIA 166
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISIFAN+LRVFIYGSYGATLQQIFFFCSIA
Sbjct: 230 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 289

Query: 165 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVLM 1
           SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVLM
Sbjct: 290 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVLM 344


>sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
          Length = 499

 Score =  215 bits (547), Expect = 3e-54
 Identities = 107/115 (93%), Positives = 111/115 (96%)
 Frame = -2

Query: 345 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIA 166
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISIFAN+LRVFIYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 300

Query: 165 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVLM 1
           SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIY LM
Sbjct: 301 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALM 355


>ref|YP_717099.1| NADH dehydrogenase subunit 2 [Brassica napus]
           gi|37591123|dbj|BAC98925.1| NADH dehydrogenase subunit 2
           [Brassica napus]
          Length = 488

 Score =  215 bits (547), Expect = 3e-54
 Identities = 107/115 (93%), Positives = 111/115 (96%)
 Frame = -2

Query: 345 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIA 166
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISIFAN+LRVFIYGSYGATLQQIFFFCSIA
Sbjct: 230 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 289

Query: 165 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYVLM 1
           SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIY LM
Sbjct: 290 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALM 344