BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026942
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40178.3| unnamed protein product [Vitis vinifera]              304   3e-80
ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor ...   303   7e-80
ref|XP_003598626.1| ADP-ribosylation factor GTPase-activating pr...   281   2e-73
ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arab...   281   2e-73
ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activat...   276   7e-72

>emb|CBI40178.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  304 bits (778), Expect = 3e-80
 Identities = 163/289 (56%), Positives = 198/289 (68%), Gaps = 2/289 (0%)
 Frame = +3

Query: 261  GV*MTTRHEKTKSHDVPG--SCLLDLLCSERPTTWTCHKEDQIRPTSPLGRLEDLLRQPG 434
            G+ M TR + T S++  G  S LLDLL S+    W C KE Q   + P GRLE+LL Q G
Sbjct: 36   GLKMPTRQDNTDSNNGSGTGSSLLDLLRSD--IYWNCRKEGQTS-SGPRGRLENLLCQSG 92

Query: 435  NNFCADCGSSDPKWVSLSHGVFICIKCSGVHRSLGVHISKVLSVKLDDWTNEQVDCLVEK 614
            NN CADCGS DPKWVS+S GVFICIKCSGVHRSLG H+SKVLS+KLD+WT+EQVD L   
Sbjct: 93   NNICADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSIKLDEWTDEQVDTLTGM 152

Query: 615  GGNTAVNLKYEAHFSDNVIKPRPDSSNEERSDFIRRKYELRHFLKSNKXXXXXXXXXXXX 794
            GGN+  N+KYEA   D + KPRPDSS EERSDFIRRKYE++ F  S++            
Sbjct: 153  GGNSEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFFNSDEQMFCPFPPQ--- 209

Query: 795  XXXXXXXXXLDASLDKKNFEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXPGM 974
                          +KK++EKQ T++R+ GLG AFR+SWRR E               GM
Sbjct: 210  --------------EKKHYEKQTTTHRLHGLGLAFRNSWRRKE--PEHKPVKKSSSSAGM 253

Query: 975  VEFIGMIKINVVRGTSLAVRDVMTSDPYVILTLGNQSMKTRVIKSNLNP 1121
            +EF+G+IK+NVV+GT+LAVRDVMTSDPYV+L LG QS+KTRVIK+NLNP
Sbjct: 254  IEFVGLIKVNVVKGTNLAVRDVMTSDPYVLLALGQQSVKTRVIKNNLNP 302


>ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD11-like [Vitis vinifera]
          Length = 376

 Score =  303 bits (775), Expect = 7e-80
 Identities = 162/286 (56%), Positives = 196/286 (68%), Gaps = 2/286 (0%)
 Frame = +3

Query: 270  MTTRHEKTKSHDVPG--SCLLDLLCSERPTTWTCHKEDQIRPTSPLGRLEDLLRQPGNNF 443
            M TR + T S++  G  S LLDLL S+    W C KE Q   + P GRLE+LL Q GNN 
Sbjct: 1    MPTRQDNTDSNNGSGTGSSLLDLLRSD--IYWNCRKEGQTS-SGPRGRLENLLCQSGNNI 57

Query: 444  CADCGSSDPKWVSLSHGVFICIKCSGVHRSLGVHISKVLSVKLDDWTNEQVDCLVEKGGN 623
            CADCGS DPKWVS+S GVFICIKCSGVHRSLG H+SKVLS+KLD+WT+EQVD L   GGN
Sbjct: 58   CADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSIKLDEWTDEQVDTLTGMGGN 117

Query: 624  TAVNLKYEAHFSDNVIKPRPDSSNEERSDFIRRKYELRHFLKSNKXXXXXXXXXXXXXXX 803
            +  N+KYEA   D + KPRPDSS EERSDFIRRKYE++ F  S++               
Sbjct: 118  SEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFFNSDEQMFCPFPPQ------ 171

Query: 804  XXXXXXLDASLDKKNFEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXPGMVEF 983
                       +KK++EKQ T++R+ GLG AFR+SWRR E               GM+EF
Sbjct: 172  -----------EKKHYEKQTTTHRLHGLGLAFRNSWRRKE--PEHKPVKKSSSSAGMIEF 218

Query: 984  IGMIKINVVRGTSLAVRDVMTSDPYVILTLGNQSMKTRVIKSNLNP 1121
            +G+IK+NVV+GT+LAVRDVMTSDPYV+L LG QS+KTRVIK+NLNP
Sbjct: 219  VGLIKVNVVKGTNLAVRDVMTSDPYVLLALGQQSVKTRVIKNNLNP 264


>ref|XP_003598626.1| ADP-ribosylation factor GTPase-activating protein [Medicago
            truncatula] gi|355487674|gb|AES68877.1| ADP-ribosylation
            factor GTPase-activating protein [Medicago truncatula]
            gi|388514945|gb|AFK45534.1| unknown [Medicago truncatula]
          Length = 400

 Score =  281 bits (719), Expect = 2e-73
 Identities = 151/277 (54%), Positives = 189/277 (68%), Gaps = 5/277 (1%)
 Frame = +3

Query: 306  VPGS---CLLDLLCSERPTTWTCHKEDQIRPTSPLGRLEDLLRQPGNNFCADCGSSDPKW 476
            +PGS   CL DL C+E P+  +  + ++   + P  RL++L+RQ GN FCADCGSS+PKW
Sbjct: 17   IPGSGSCCLYDLFCTETPSLNSQSQRERWMLSGPQERLDNLMRQAGNKFCADCGSSEPKW 76

Query: 477  VSLSHGVFICIKCSGVHRSLGVHISKVLSVKLDDWTNEQVDCLVEKGGNTAVNLKYEAHF 656
            VS S GVFICIKCSG+HRSLGVHISKVLS+ LDDWT+EQVD LV  GGNT +N KYEA  
Sbjct: 77   VSSSLGVFICIKCSGIHRSLGVHISKVLSLNLDDWTDEQVDSLVNLGGNTLINKKYEACV 136

Query: 657  SDNVIKPRPDSSNEERSDFIRRKYELRHFLKS--NKXXXXXXXXXXXXXXXXXXXXXLDA 830
               V KP+P+SS EERSDFIRRKYEL+ FL S  N                       + 
Sbjct: 137  PSYVKKPKPNSSIEERSDFIRRKYELQQFLDSEENLICPFIPSHSRTTSSSHSSSSSYNP 196

Query: 831  SLDKKNFEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXPGMVEFIGMIKINVV 1010
              +KK ++KQ T NRI   G +FR+SW R +               GMVEF+G+IK+NVV
Sbjct: 197  PQEKKRYDKQTTRNRI---GLSFRNSWGRKD--SESKSTKKSNSLAGMVEFVGLIKVNVV 251

Query: 1011 RGTSLAVRDVMTSDPYVILTLGNQSMKTRVIKSNLNP 1121
            +GT+LA+RD++TSDPYVIL+LG+QS+KTRVIK+NLNP
Sbjct: 252  KGTNLAIRDIVTSDPYVILSLGHQSVKTRVIKNNLNP 288


>ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arabidopsis lyrata subsp.
            lyrata] gi|297328399|gb|EFH58818.1| hypothetical protein
            ARALYDRAFT_478135 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  281 bits (719), Expect = 2e-73
 Identities = 157/286 (54%), Positives = 186/286 (65%), Gaps = 2/286 (0%)
 Frame = +3

Query: 270  MTTRHEKTKSHDVPGS--CLLDLLCSERPTTWTCHKEDQIRPTSPLGRLEDLLRQPGNNF 443
            M+   E  +  +V GS  CL +LLCSE P  WT  K+ Q   + P  RLE LL+QPGN +
Sbjct: 1    MSLGQENVEPVEVSGSHACLYELLCSETPK-WTPLKDLQTSSSDPRDRLEKLLKQPGNKY 59

Query: 444  CADCGSSDPKWVSLSHGVFICIKCSGVHRSLGVHISKVLSVKLDDWTNEQVDCLVEKGGN 623
            CADCGS +PKWVSLS GVFICIKCSGVHRSLGVHISKVLSVKLD+WT++QVD LV  GGN
Sbjct: 60   CADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQVDMLVGYGGN 119

Query: 624  TAVNLKYEAHFSDNVIKPRPDSSNEERSDFIRRKYELRHFLKSNKXXXXXXXXXXXXXXX 803
            TAVN ++EA   D   KP+PDS+NEER+DFIR+KYE   F+                   
Sbjct: 120  TAVNQRFEACNIDQSKKPKPDSTNEERNDFIRKKYEQHQFMDPKDGALCPYQQPSRTNTS 179

Query: 804  XXXXXXLDASLDKKNFEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXPGMVEF 983
                          +   + T NRI   GHAFR+SW R E               GMVEF
Sbjct: 180  PPSLC---------SASHRSTKNRI---GHAFRNSWGRRE--SDHKGPKKSNSMAGMVEF 225

Query: 984  IGMIKINVVRGTSLAVRDVMTSDPYVILTLGNQSMKTRVIKSNLNP 1121
            +G+IK+NVV+GT+LAVRDVMTSDPYVIL LG QS+KTRVIK+NLNP
Sbjct: 226  VGLIKVNVVKGTNLAVRDVMTSDPYVILALGQQSVKTRVIKNNLNP 271


>ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activating protein AGD11
            [Arabidopsis thaliana]
            gi|75154127|sp|Q8L7A4.1|AGD11_ARATH RecName:
            Full=Probable ADP-ribosylation factor GTPase-activating
            protein AGD11; Short=ARF GAP AGD11; AltName: Full=Protein
            ARF-GAP DOMAIN 11; Short=AtAGD11
            gi|22531086|gb|AAM97047.1| putative GTPase-activating
            protein [Arabidopsis thaliana] gi|25083805|gb|AAN72120.1|
            putative GTPase-activating protein [Arabidopsis thaliana]
            gi|332641102|gb|AEE74623.1| putative ADP-ribosylation
            factor GTPase-activating protein AGD11 [Arabidopsis
            thaliana]
          Length = 385

 Score =  276 bits (706), Expect = 7e-72
 Identities = 156/287 (54%), Positives = 183/287 (63%), Gaps = 3/287 (1%)
 Frame = +3

Query: 270  MTTRHEKTKSHDVPGS--CLLDLLCSERPTTWTCHKED-QIRPTSPLGRLEDLLRQPGNN 440
            M+   E     +V GS  CL +LLCSE P       ED Q   + P  RLE LL+QPGN 
Sbjct: 1    MSLGQENVDPVEVSGSHACLYELLCSETPKWTPLRVEDLQTSSSDPRDRLEKLLKQPGNK 60

Query: 441  FCADCGSSDPKWVSLSHGVFICIKCSGVHRSLGVHISKVLSVKLDDWTNEQVDCLVEKGG 620
            +CADCGS +PKWVSLS GVFICIKCSGVHRSLGVHISKVLSVKLD+WT++QVD LV  GG
Sbjct: 61   YCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQVDMLVGYGG 120

Query: 621  NTAVNLKYEAHFSDNVIKPRPDSSNEERSDFIRRKYELRHFLKSNKXXXXXXXXXXXXXX 800
            NTAVN ++EA   D   KP+PDS+NEER+DFIR+KYE   F+                  
Sbjct: 121  NTAVNERFEACNIDQSKKPKPDSTNEERNDFIRKKYEQHQFMDPKDGALCTYQQPSRTNT 180

Query: 801  XXXXXXXLDASLDKKNFEKQHTSNRIQGLGHAFRHSWRRTECXXXXXXXXXXXXXPGMVE 980
                           +   + T NRI   GHAFR+SW R E               GMVE
Sbjct: 181  SPPSLC---------SASHRSTKNRI---GHAFRNSWGRRE--SDHKGPKKSNSMAGMVE 226

Query: 981  FIGMIKINVVRGTSLAVRDVMTSDPYVILTLGNQSMKTRVIKSNLNP 1121
            F+G+IK+NVV+GT+LAVRDVMTSDPYVIL LG QS+KTRVIK+NLNP
Sbjct: 227  FVGLIKVNVVKGTNLAVRDVMTSDPYVILALGQQSVKTRVIKNNLNP 273