BLASTX nr result
ID: Coptis25_contig00026939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00026939
(1826 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi... 775 0.0
ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|2... 741 0.0
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,... 738 0.0
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi... 732 0.0
ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containi... 728 0.0
>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 775 bits (2000), Expect = 0.0
Identities = 381/467 (81%), Positives = 423/467 (90%)
Frame = -1
Query: 1826 LTRNNKVDSSVLMKLYQEMEYDKIELDGQLMNDFILAFAKAGNPNKALYFLGVFQGQGLS 1647
LTR NK DSS+L K+Y E+E DKIELDGQL+ND I+ FAK+G+ N+A+ FL + QG GLS
Sbjct: 229 LTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLS 288
Query: 1646 PKTATLIAVISSLGKLGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELI 1467
PKTATL+AVI++LG GRT EAEA+FEE+KEGGL PRTRAYNA+LKGYVK G L+DAE I
Sbjct: 289 PKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESI 348
Query: 1466 VSEMERCGVFPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFGRILASYRD 1287
VSEMER G PDEHTYSLLIDAYANAGRWESARIVLKEMEAS V+PNSYVF RILASYRD
Sbjct: 349 VSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRD 408
Query: 1286 RGDWQKSFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVT 1107
RG WQKSF VLREM+NSG+SPDRHFYNVMIDTFGK NCL+HA+ATF+RM+ EG++PD VT
Sbjct: 409 RGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVT 468
Query: 1106 WNTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQ 927
WNTLID HCKSG H+KAEELF AMQ+SG SPCTTTYNIMINS G+QE+WE++K LLGKMQ
Sbjct: 469 WNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQ 528
Query: 926 GQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSE 747
QGLL NVVTYTTLVD+YGQSGRF DAI+CLEVMKS GLKPS TMYNAL+NAYAQRGLSE
Sbjct: 529 SQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSE 588
Query: 746 QAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLM 567
QA+NAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAF+VLQYMKENDLKPDVVT+TTLM
Sbjct: 589 QAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLM 648
Query: 566 KALIRVEKFEKVPSVYEQMILSGVTPDRKARAMLRSALRYMRQTLDS 426
KALIRVEKF+KVP+VYE+M LSG TPDRKARAMLRSALRYM +TL S
Sbjct: 649 KALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSALRYMERTLKS 695
Score = 97.1 bits (240), Expect = 1e-17
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Frame = -1
Query: 1211 YNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDS------------------ 1086
YN +I + + LE A+ RM+ +G D V ++ +I S
Sbjct: 187 YNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAE 246
Query: 1085 -------------------HCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEK 963
KSG ++A +Q +G SP T T +I +LG +
Sbjct: 247 IESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGR 306
Query: 962 WEEIKNLLGKMQGQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNA 783
EE + + +++ GL+P Y L+ Y ++G DA + M+ +G P Y+
Sbjct: 307 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 366
Query: 782 LVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKEND 603
L++AYA G E A + M A G++P+ V + ++ ++ + + ++F VL+ M+ +
Sbjct: 367 LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 426
Query: 602 LKPDVVTFTTLMKALIRVEKFEKVPSVYEQMILSGVTPD 486
+ PD + ++ + + + +++M + GV PD
Sbjct: 427 VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 465
Score = 85.9 bits (211), Expect = 3e-14
Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
Frame = -1
Query: 1211 YNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSGRHDKAEELFGAMQ 1032
Y+++I G+ L A +R + + P +T+N LI + ++ +KA L M+
Sbjct: 157 YSILIHALGRSEKLYEAFLLSQR---QTLTP--LTYNALIGACARNDDLEKALNLMSRMR 211
Query: 1031 DSGFSPCTTTYNIMINSLGQQEK---------WEEIK----------------------- 948
GF Y+ +I SL + K + EI+
Sbjct: 212 RDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 271
Query: 947 -----NLLGKMQGQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNA 783
+ L +QG GL P T ++ G +GR +A E +K GL P YNA
Sbjct: 272 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 331
Query: 782 LVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKEND 603
L+ Y + G + A + M G P + LI+A+ R A VL+ M+ +
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391
Query: 602 LKPDVVTFTTLMKALIRVEKFEKVPSVYEQMILSGVTPDR 483
++P+ F+ ++ + K++K V +M SGV+PDR
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDR 431
Score = 76.3 bits (186), Expect = 3e-11
Identities = 48/208 (23%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Frame = -1
Query: 1073 GRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTY 894
GR +K E F Q +P T YN +I + + + E+ NL+ +M+ G + V Y
Sbjct: 165 GRSEKLYEAFLLSQRQTLTPLT--YNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNY 222
Query: 893 TTLVDVYGQSGRFNDAI--DCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVM 720
+ ++ ++ + + ++ ++S ++ + N ++ +A+ G +A++ ++
Sbjct: 223 SFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMV 282
Query: 719 RADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKF 540
+ +GL P L ++I A G R EA A+ + +KE L P + L+K ++
Sbjct: 283 QGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSL 342
Query: 539 EKVPSVYEQMILSGVTPDRKARAMLRSA 456
+ S+ +M SG +PD ++L A
Sbjct: 343 KDAESIVSEMERSGFSPDEHTYSLLIDA 370
>ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|222856421|gb|EEE93968.1|
predicted protein [Populus trichocarpa]
Length = 709
Score = 741 bits (1913), Expect = 0.0
Identities = 357/466 (76%), Positives = 417/466 (89%)
Frame = -1
Query: 1826 LTRNNKVDSSVLMKLYQEMEYDKIELDGQLMNDFILAFAKAGNPNKALYFLGVFQGQGLS 1647
L R N+VDS++L KLY+E+E DK+ELD QL ND I+ FAKAG+ +KAL FLGV QG GLS
Sbjct: 243 LMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLS 302
Query: 1646 PKTATLIAVISSLGKLGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELI 1467
KTATL+AVI +LG GRT+EAEA+FEEM++ GLKPRTRAYNA+L+GYVK GLL+DAE +
Sbjct: 303 VKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFV 362
Query: 1466 VSEMERCGVFPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFGRILASYRD 1287
VSEMER GV P+E TYS LIDAY NAGRWESARIVLKEMEASNVQPN+YVF RIL+SYRD
Sbjct: 363 VSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRD 422
Query: 1286 RGDWQKSFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVT 1107
+G+WQKSF VLREM+NSG+ PDR FYNVMIDTFGK+NCL+HA+ATF+RM +EGI+PD VT
Sbjct: 423 KGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVT 482
Query: 1106 WNTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQ 927
WNTLID HC++G+HD+AEELF M + G+SPC TT+NIMINS G QE+W+++KNLL M+
Sbjct: 483 WNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMR 542
Query: 926 GQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSE 747
QGL+PN VTYTTL+D+YG+SGRFNDAI+CL+ MK+AGLKPS TMYNAL+NAYAQRGLSE
Sbjct: 543 SQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSE 602
Query: 746 QAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLM 567
QAV+AFR MR DGLKPS+L LNSLINAFGEDRRDAEAF VLQYMKENDLKPDVVT+TTLM
Sbjct: 603 QAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLM 662
Query: 566 KALIRVEKFEKVPSVYEQMILSGVTPDRKARAMLRSALRYMRQTLD 429
KALIRVEKF+KVPSVYE+MILSG TPDRKARAMLRSAL+YM+QTL+
Sbjct: 663 KALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQTLE 708
Score = 139 bits (350), Expect = 3e-30
Identities = 92/381 (24%), Positives = 178/381 (46%), Gaps = 2/381 (0%)
Frame = -1
Query: 1622 VISSLGKLGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELIVSEMERCG 1443
+I +LG+ + EA F + L P T YNA++ + L A +++ M + G
Sbjct: 174 LIHALGQSEKLYEA---FLLSQRQNLTPLT--YNALISACARNNDLEKALNLITRMRQDG 228
Query: 1442 VFPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFGRILASYRDRGDWQK 1269
D YSL+I + R +SA + + +E+E ++ + + I+ + GD K
Sbjct: 229 YPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSK 288
Query: 1268 SFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLID 1089
+ L ++ SG+S +I G A A FE M+ G+KP +N L+
Sbjct: 289 ALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLR 348
Query: 1088 SHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLP 909
+ K+G AE + M+ SG SP TY+ +I++ G +WE + +L +M+ + P
Sbjct: 349 GYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQP 408
Query: 908 NVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAF 729
N ++ ++ Y G + + L M+++G++P YN +++ + + + A+ F
Sbjct: 409 NAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATF 468
Query: 728 RVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRV 549
M ++G++P + N+LI+ + A + + M E P TF ++ +
Sbjct: 469 DRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQ 528
Query: 548 EKFEKVPSVYEQMILSGVTPD 486
E+++ V ++ M G+ P+
Sbjct: 529 ERWDDVKNLLAHMRSQGLVPN 549
Score = 99.0 bits (245), Expect = 4e-18
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 2/245 (0%)
Frame = -1
Query: 1211 YNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSGRHDKA--EELFGA 1038
YN +I + N LE A+ RM+ +G D V ++ +I S + R D A ++L+
Sbjct: 201 YNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYRE 260
Query: 1037 MQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTYTTLVDVYGQSGR 858
++ N +I + + LG +QG GL T ++ G GR
Sbjct: 261 IECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGR 320
Query: 857 FNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNS 678
+A E M+ GLKP YNAL+ Y + GL + A M G+ P+ +
Sbjct: 321 TVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSF 380
Query: 677 LINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKFEKVPSVYEQMILSG 498
LI+A+G R A VL+ M+ ++++P+ F+ ++ + +++K V +M SG
Sbjct: 381 LIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSG 440
Query: 497 VTPDR 483
V PDR
Sbjct: 441 VRPDR 445
Score = 72.8 bits (177), Expect = 3e-10
Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Frame = -1
Query: 1073 GRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTY 894
G+ +K E F Q +P T YN +I++ + E+ NL+ +M+ G + V Y
Sbjct: 179 GQSEKLYEAFLLSQRQNLTPLT--YNALISACARNNDLEKALNLITRMRQDGYPSDFVNY 236
Query: 893 TTLVDVYGQSGRFNDAI--DCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVM 720
+ ++ + R + AI ++ L+ + + N ++ +A+ G +A+ V+
Sbjct: 237 SLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVV 296
Query: 719 RADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKF 540
+ GL L ++I A G R EA A+ + M++N LKP + L++ ++
Sbjct: 297 QGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLL 356
Query: 539 EKVPSVYEQMILSGVTPDRKARAMLRSA 456
+ V +M SGV+P+ + + L A
Sbjct: 357 KDAEFVVSEMERSGVSPNEQTYSFLIDA 384
>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 695
Score = 738 bits (1905), Expect = 0.0
Identities = 354/466 (75%), Positives = 417/466 (89%)
Frame = -1
Query: 1826 LTRNNKVDSSVLMKLYQEMEYDKIELDGQLMNDFILAFAKAGNPNKALYFLGVFQGQGLS 1647
L R+N++DS +L KLY E++ DK+ELD QL ND I+ FAKAG+PNKA+ FLG+ Q GLS
Sbjct: 229 LVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLS 288
Query: 1646 PKTATLIAVISSLGKLGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELI 1467
P+TATLIAVIS+LG GR IEAEA+FEEMK+ GLKP+TRAYN +LKGYVK G+L+DAE I
Sbjct: 289 PRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFI 348
Query: 1466 VSEMERCGVFPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFGRILASYRD 1287
VSEMER GV PDE TYSLLIDAY+NAGRWESARIVLKEMEA+N+ PNSYVF RILASYRD
Sbjct: 349 VSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRD 408
Query: 1286 RGDWQKSFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVT 1107
RG+WQKSF VL+EMKNSG+ PDRHFYNVMIDTFGK++CL+HA+ TF++M +EGI+PD VT
Sbjct: 409 RGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVT 468
Query: 1106 WNTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQ 927
WNTLID HCK+ H++AEELF M + GFSPC TT+NIMINS G+QE+W+++K L+G M+
Sbjct: 469 WNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMR 528
Query: 926 GQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSE 747
GLLPNVVTYTTL+D+YG+SGRF+DAI+CLE MKSAGLKPS TMYNAL+NAYAQ+GLSE
Sbjct: 529 SLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSE 588
Query: 746 QAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLM 567
QAVNAFR+MRAD LKPS+L LNSLINAFGEDRRDAEAF+VL+YMKENDLKPDVVT+TTLM
Sbjct: 589 QAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLM 648
Query: 566 KALIRVEKFEKVPSVYEQMILSGVTPDRKARAMLRSALRYMRQTLD 429
KALIRV+KF KVPSVYE+MIL+G TPDRKARAMLRSAL+YM+QTL+
Sbjct: 649 KALIRVDKFNKVPSVYEEMILAGCTPDRKARAMLRSALKYMKQTLN 694
Score = 149 bits (377), Expect = 2e-33
Identities = 103/408 (25%), Positives = 180/408 (44%), Gaps = 37/408 (9%)
Frame = -1
Query: 1601 LGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELIVSEMERCGVFPDEHT 1422
LGR+ + F ++ L P T YNA++ + L A ++S M + G D
Sbjct: 164 LGRSEKLYEAFLLSQQQALSPLT--YNALINACARNNDLEKAINLISRMRQDGYPSDFVN 221
Query: 1421 YSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFGRILASYRDRGDWQKSFSVLRE 1248
YSL+I + + R +S + + E++ ++ + + I+ + GD K+ L
Sbjct: 222 YSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGM 281
Query: 1247 MKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSGR 1068
++ SG+SP +I G + A A FE MK G+KP +N L+ + K+G
Sbjct: 282 VQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGM 341
Query: 1067 HDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVT--- 897
AE + M+ SG SP TY+++I++ +WE + +L +M+ ++PN
Sbjct: 342 LKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSR 401
Query: 896 --------------------------------YTTLVDVYGQSGRFNDAIDCLEVMKSAG 813
Y ++D +G+ + A+D + M S G
Sbjct: 402 ILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEG 461
Query: 812 LKPSITMYNALVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAF 633
++P +N L++ + + L E+A F M G P V N +IN+FGE R +
Sbjct: 462 IQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVK 521
Query: 632 AVLQYMKENDLKPDVVTFTTLMKALIRVEKFEKVPSVYEQMILSGVTP 489
++ M+ L P+VVT+TTL+ + +F E M +G+ P
Sbjct: 522 TLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKP 569
Score = 104 bits (260), Expect = 7e-20
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Frame = -1
Query: 1211 YNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSGRHDK--AEELFGA 1038
YN +I+ + N LE AI RM+ +G D V ++ +I S +S R D ++L+
Sbjct: 187 YNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSE 246
Query: 1037 MQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTYTTLVDVYGQSGR 858
+Q N +I + + LG +Q GL P T ++ G SGR
Sbjct: 247 IQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGR 306
Query: 857 FNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVMRADGLKPSVLVLNS 678
+A E MK GLKP YN L+ Y + G+ + A M G+ P +
Sbjct: 307 IIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSL 366
Query: 677 LINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKFEKVPSVYEQMILSG 498
LI+A+ R A VL+ M+ N++ P+ F+ ++ + +++K V ++M SG
Sbjct: 367 LIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSG 426
Query: 497 VTPDR 483
V PDR
Sbjct: 427 VRPDR 431
Score = 89.0 bits (219), Expect = 4e-15
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Frame = -1
Query: 1073 GRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTY 894
GR +K E F Q SP T YN +IN+ + E+ NL+ +M+ G + V Y
Sbjct: 165 GRSEKLYEAFLLSQQQALSPLT--YNALINACARNNDLEKAINLISRMRQDGYPSDFVNY 222
Query: 893 TTLVDVYGQSGRFNDAI--DCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVM 720
+ ++ +S R + I ++ L+ + + N ++ +A+ G +A+ ++
Sbjct: 223 SLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMV 282
Query: 719 RADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKF 540
+A GL P L ++I+A G+ R EA A+ + MK+N LKP + L+K ++
Sbjct: 283 QASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGML 342
Query: 539 EKVPSVYEQMILSGVTPDRKARAMLRSA 456
+ + +M SGV+PD ++L A
Sbjct: 343 KDAEFIVSEMERSGVSPDECTYSLLIDA 370
>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 732 bits (1890), Expect = 0.0
Identities = 351/465 (75%), Positives = 412/465 (88%)
Frame = -1
Query: 1826 LTRNNKVDSSVLMKLYQEMEYDKIELDGQLMNDFILAFAKAGNPNKALYFLGVFQGQGLS 1647
LTR NK+D +L KLY+E+E DKIELDG L+ND IL FAKAG+PN+ALYFL + Q GL+
Sbjct: 254 LTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLN 313
Query: 1646 PKTATLIAVISSLGKLGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELI 1467
PKT+T +AVIS+LG GRT EAEA+FEEMKEGGLKPR +A+NA+LKGY +KG L++AE I
Sbjct: 314 PKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESI 373
Query: 1466 VSEMERCGVFPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFGRILASYRD 1287
+SEME+ G+ PDEHTY LL+DAYAN GRWESAR +LK+MEA NVQPN+++F RILASYRD
Sbjct: 374 ISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRD 433
Query: 1286 RGDWQKSFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVT 1107
RG+WQK+F VLREMKNS + PDRHFYNVMIDTFGK+NCL+HA+ T++RM +EGI+PD VT
Sbjct: 434 RGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVT 493
Query: 1106 WNTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQ 927
WNTLID H K G HD+A ELF MQ+ G+ PC TTYNIMINSLG+QEKW+E+K LLGKMQ
Sbjct: 494 WNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQ 553
Query: 926 GQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSE 747
QGLLPNVVTYTTLVD+YG SGRFNDAIDCLE MKSAGLKPS TMYNAL+NA+AQRGLSE
Sbjct: 554 SQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSE 613
Query: 746 QAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLM 567
QAVNA+RVM +DGL+PS+L LNSLINAFGEDRRD EAF++LQYMKEND+KPDVVT+TTLM
Sbjct: 614 QAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLM 673
Query: 566 KALIRVEKFEKVPSVYEQMILSGVTPDRKARAMLRSALRYMRQTL 432
KALIRV+KF+KVP+VYE+MILSG TPD KARAMLRSALRYM++TL
Sbjct: 674 KALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTL 718
Score = 149 bits (377), Expect = 2e-33
Identities = 89/374 (23%), Positives = 182/374 (48%), Gaps = 2/374 (0%)
Frame = -1
Query: 1601 LGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELIVSEMERCGVFPDEHT 1422
LGR+ + F ++ L P T YNA++ + L A ++S M + G D
Sbjct: 189 LGRSEKLYEAFILSQKQTLTPLT--YNALIGACARNNDLEKALNLMSRMRQDGFQSDFIN 246
Query: 1421 YSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFGRILASYRDRGDWQKSFSVLRE 1248
YSL+I + + + + + +E+E+ ++ + + I+ + GD ++ L
Sbjct: 247 YSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSM 306
Query: 1247 MKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVTWNTLIDSHCKSGR 1068
++ SG++P + +I G + E A A FE MK G+KP +N L+ + + G
Sbjct: 307 VQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366
Query: 1067 HDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTYTT 888
+AE + M+ SG SP TY +++++ +WE ++LL +M+ + + PN ++
Sbjct: 367 LKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSR 426
Query: 887 LVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVMRADG 708
++ Y G + + L MK++ +KP YN +++ + + + A+ + M ++G
Sbjct: 427 ILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEG 486
Query: 707 LKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKFEKVP 528
++P V+ N+LI+ + A + + M+E P T+ ++ +L EK+++V
Sbjct: 487 IEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVK 546
Query: 527 SVYEQMILSGVTPD 486
+ +M G+ P+
Sbjct: 547 ILLGKMQSQGLLPN 560
Score = 90.1 bits (222), Expect = 2e-15
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Frame = -1
Query: 1181 YNCLEHAIATFERMKAEGIKPDN-----VTWNTLIDSHCKSGRHDKAEELFGAMQDSGFS 1017
Y+ L HA+ E++ I +T+N LI + ++ +KA L M+ GF
Sbjct: 182 YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ 241
Query: 1016 PCTTTYNIMINSLGQ---------QEKWEEIKN--------------------------- 945
Y+++I SL + Q+ +EEI++
Sbjct: 242 SDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 301
Query: 944 -LLGKMQGQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAY 768
L +Q GL P T+ ++ G GR +A E MK GLKP I +NAL+ Y
Sbjct: 302 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 361
Query: 767 AQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDV 588
A++G ++A + M GL P L++A+ R A +L+ M+ +++P+
Sbjct: 362 ARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 421
Query: 587 VTFTTLMKALIRVEKFEKVPSVYEQMILSGVTPDR 483
F+ ++ + +++K V +M S V PDR
Sbjct: 422 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDR 456
>ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 728 bits (1880), Expect = 0.0
Identities = 349/467 (74%), Positives = 413/467 (88%)
Frame = -1
Query: 1826 LTRNNKVDSSVLMKLYQEMEYDKIELDGQLMNDFILAFAKAGNPNKALYFLGVFQGQGLS 1647
LTR+NK+DS +L KLY E+E DKIE+DG LMND IL F+KAG+P +A+ FL + Q GL+
Sbjct: 230 LTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLN 289
Query: 1646 PKTATLIAVISSLGKLGRTIEAEAVFEEMKEGGLKPRTRAYNAVLKGYVKKGLLRDAELI 1467
PK +TL+AVI +LG GRT EAEA+FEE++E G +PRTRAYNA+LKGYVK G L+DAE +
Sbjct: 290 PKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFV 349
Query: 1466 VSEMERCGVFPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFGRILASYRD 1287
VSEME+ GV PDE TYSLLIDAYA+AGRWESARIVLKEMEASNV+PNSYV+ RILASYRD
Sbjct: 350 VSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRD 409
Query: 1286 RGDWQKSFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAIATFERMKAEGIKPDNVT 1107
+G+WQKSF VL++MK++G+ PDRHFYNVMIDTFGKYNCL+HA+ATFERM +EGI+PD VT
Sbjct: 410 KGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVT 469
Query: 1106 WNTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQ 927
WNTLI+ HCKSGRH+ AEELFG MQ G+SPC TTYNIMINS+G+Q++WE++ L KMQ
Sbjct: 470 WNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQ 529
Query: 926 GQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAYAQRGLSE 747
QGLLPN +TYTTLVDVYG+SGRF+DAI+CLEV+KS G KP+ TMYNAL+NAYAQRGLSE
Sbjct: 530 SQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSE 589
Query: 746 QAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLM 567
AVNAFR+M +GL PS+L LNSLINAFGEDRRDAEAFAVLQYMKEN+++PDVVT+TTLM
Sbjct: 590 LAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLM 649
Query: 566 KALIRVEKFEKVPSVYEQMILSGVTPDRKARAMLRSALRYMRQTLDS 426
KALIRVEKF+KVP+VYE+M+ SG TPDRKARAMLRSALRYM+QTL S
Sbjct: 650 KALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSALRYMKQTLKS 696
Score = 110 bits (275), Expect = 1e-21
Identities = 77/334 (23%), Positives = 159/334 (47%), Gaps = 3/334 (0%)
Frame = -1
Query: 1478 AELIVSEMERCGV-FPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFGRIL 1302
A +VS +++ + F E YS+LI+A + + A ++ + + + N+ ++
Sbjct: 138 AYAVVSWLQKHNLCFSYELLYSILINALGRSEKLYEAFLLSQRQVLTPLTYNA-----LI 192
Query: 1301 ASYRDRGDWQKSFSVLREMKNSGISPDRHFYNVMIDTFGKYNCLEHAI--ATFERMKAEG 1128
+ GD +K+ +++ +M+ G PD Y+ +I + N ++ I + ++ +
Sbjct: 193 GACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDK 252
Query: 1127 IKPDNVTWNTLIDSHCKSGRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIK 948
I+ D N +I K+G +A Q +G +P +T +I +LG + E +
Sbjct: 253 IEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAE 312
Query: 947 NLLGKMQGQGLLPNVVTYTTLVDVYGQSGRFNDAIDCLEVMKSAGLKPSITMYNALVNAY 768
L +++ G P Y L+ Y ++G DA + M+ AG+KP Y+ L++AY
Sbjct: 313 ALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAY 372
Query: 767 AQRGLSEQAVNAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDV 588
A G E A + M A ++P+ V + ++ ++ + ++F VL+ MK N ++PD
Sbjct: 373 AHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDR 432
Query: 587 VTFTTLMKALIRVEKFEKVPSVYEQMILSGVTPD 486
+ ++ + + + +E+M+ G+ PD
Sbjct: 433 HFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPD 466
Score = 73.9 bits (180), Expect = 1e-10
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Frame = -1
Query: 1073 GRHDKAEELFGAMQDSGFSPCTTTYNIMINSLGQQEKWEEIKNLLGKMQGQGLLPNVVTY 894
GR +K E F Q +P T YN +I + + E+ NL+ KM+ G P+ V Y
Sbjct: 166 GRSEKLYEAFLLSQRQVLTPLT--YNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNY 223
Query: 893 TTLVDVYGQSGRFNDAI--DCLEVMKSAGLKPSITMYNALVNAYAQRGLSEQAVNAFRVM 720
++++ +S + + I +++ ++ + N ++ +++ G +A+ +
Sbjct: 224 SSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMA 283
Query: 719 RADGLKPSVLVLNSLINAFGEDRRDAEAFAVLQYMKENDLKPDVVTFTTLMKALIRVEKF 540
+++GL P L ++I A G R EA A+ + ++EN +P + L+K ++
Sbjct: 284 QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSL 343
Query: 539 EKVPSVYEQMILSGVTPDRKARAMLRSA 456
+ V +M +GV PD + ++L A
Sbjct: 344 KDAEFVVSEMEKAGVKPDEQTYSLLIDA 371