BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026935
         (1621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   233   1e-58
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   233   1e-58
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-56
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   224   4e-56
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]    212   2e-52

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  233 bits (594), Expect = 1e-58
 Identities = 159/412 (38%), Positives = 222/412 (53%), Gaps = 11/412 (2%)
 Frame = -2

Query: 1326 DWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNTY 1147
            DWS  L  +LLD IA +   + DYVR RAV   WR  +PK P H     P LM P    +
Sbjct: 3    DWSQ-LHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 1146 CDCDCDAFNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRLQ 970
                   F+L +   + H ++LP+A H   R GSS GWL+ LD++  I L+NP+T++++ 
Sbjct: 62   -HTHRPFFSLSL--NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVH 118

Query: 969  LPPLSTFPDVLEYNPERIGMEYSVRSIWLQKDTSKFFSLAKMKNYFIEKLVLSSSPTE-K 793
            LPPLSTFP+V+ +N   +G EY++R+      T    SL KM++ FI+K +LSSSP    
Sbjct: 119  LPPLSTFPNVVRFNFADVGREYALRTSSGDVYTR---SLKKMRDSFIKKTILSSSPANGS 175

Query: 792  NCLAMAIFRDCNKLACCRLGDEGWKNVEGGLCHFQDIIYFNGKFYALSILGRLFIVSNAE 613
            + +A+ I      LA CR  D+ W  +E    + +D+I+  G FYA++  G + +    +
Sbjct: 176  DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAV---CD 232

Query: 612  VEASSPMPTFVIGPPDGFSCSSGKVYLVESSGELLMVDRGIKL--------GSINKNTLK 457
            V  SSP  + +I  P  F       YLVES  ELL+V R + L         S+   T +
Sbjct: 233  VSGSSPRVS-IIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTR 289

Query: 456  FSIFKLNVYPNSLPTWSKVMSLGDRMLFLGQGESFSFSSRDLPGPWKGNHIYFTDDHVLL 277
            F + +L++     P W  V SLGDR LFLG+  S S SS D PG  KGN IY+TDD+   
Sbjct: 290  FQVCRLDL---KAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDY--- 342

Query: 276  GNPKYQKAAG-SDYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 124
                Y    G  D G+FNLED   +    PLP  +   R   WPPP+W+ PN
Sbjct: 343  SEDNYDGIGGEQDLGIFNLEDGSIE----PLPCSHFRIR---WPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  233 bits (594), Expect = 1e-58
 Identities = 159/412 (38%), Positives = 222/412 (53%), Gaps = 11/412 (2%)
 Frame = -2

Query: 1326 DWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNTY 1147
            DWS  L  +LLD IA +   + DYVR RAV   WR  +PK P H     P LM P    +
Sbjct: 3    DWSQ-LHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 1146 CDCDCDAFNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRLQ 970
                   F+L +   + H ++LP+A H   R GSS GWL+ LD++  I L+NP+T++++ 
Sbjct: 62   -HTHRPFFSLSL--NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVH 118

Query: 969  LPPLSTFPDVLEYNPERIGMEYSVRSIWLQKDTSKFFSLAKMKNYFIEKLVLSSSPTE-K 793
            LPPLSTFP+V+ +N   +G EY++R+      T    SL KM++ FI+K +LSSSP    
Sbjct: 119  LPPLSTFPNVVRFNFADVGREYALRTSSGDVYTR---SLKKMRDSFIKKTILSSSPANGS 175

Query: 792  NCLAMAIFRDCNKLACCRLGDEGWKNVEGGLCHFQDIIYFNGKFYALSILGRLFIVSNAE 613
            + +A+ I      LA CR  D+ W  +E    + +D+I+  G FYA++  G + +    +
Sbjct: 176  DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAV---CD 232

Query: 612  VEASSPMPTFVIGPPDGFSCSSGKVYLVESSGELLMVDRGIKL--------GSINKNTLK 457
            V  SSP  + +I  P  F       YLVES  ELL+V R + L         S+   T +
Sbjct: 233  VSGSSPRVS-IIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTR 289

Query: 456  FSIFKLNVYPNSLPTWSKVMSLGDRMLFLGQGESFSFSSRDLPGPWKGNHIYFTDDHVLL 277
            F + +L+   +  P W  V SLGDR LFLG+  S S SS D PG  KGN IY+TDD+   
Sbjct: 290  FQVCRLD---SKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDY--- 342

Query: 276  GNPKYQKAAG-SDYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 124
                Y    G  D G+FNLED   +    PLP  +   R   WPPP+W+ PN
Sbjct: 343  SEDNYDGIGGEQDLGIFNLEDGSIE----PLPCSHFRIR---WPPPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  226 bits (576), Expect = 1e-56
 Identities = 147/413 (35%), Positives = 229/413 (55%), Gaps = 10/413 (2%)
 Frame = -2

Query: 1332 SMDWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRN 1153
            ++DW+  L  +L++ I+ +I  ++DY+  +AV  AW++ +PK P H     P L+ P   
Sbjct: 2    AVDWTQ-LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60

Query: 1152 TYCDCDCDAFNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTR 976
            +        FNL  +  + H++ LP+A H     GSS GWL+ LDDS SI +INP+T+ +
Sbjct: 61   SNQSSYRAFFNL--STYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRK 118

Query: 975  LQLPPLSTFPDVLEYNPERIGMEYSVRSIWLQKDTSKFFSLAKMKNYFIEKLVLSSSPTE 796
            + LP +S+FP+V+ ++   +G EY + +   +++T+   SL +M++ FI+K+V+SSSP E
Sbjct: 119  IHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTA---SLRQMRDGFIKKVVMSSSPLE 175

Query: 795  KN---CLAMAIFRDCNKLACCRLGDEGWKNVEGGLCHFQDIIYFNGKFYALSILGRLFIV 625
            K     +AMAI      LA C+ GDE W  VE      +D+IYFNG FYA++  G++ + 
Sbjct: 176  KKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVV- 234

Query: 624  SNAEVEASSPMPTFVIGPPDGFSCSSGKVYLVESSGELLMV----DRGIKLGSINKNTLK 457
               +V  +SP  +F+  P           YLV S   LL+V    D  ++       T +
Sbjct: 235  --CDVNGNSPKVSFIETPR---QIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTAR 289

Query: 456  FSIFKLNVYPNSLPTWSKVMSLGDRMLFLGQGESFSFSSRDLPGPWKGNHIYFTDDHVLL 277
            F +FKL++   + P W +V SLGD MLF+G+  S + S+  L G   G+ IY+TDD+   
Sbjct: 290  FEVFKLDL---NGPRWERVTSLGDMMLFIGENSSLALSASGLSG-CMGDCIYYTDDY--- 342

Query: 276  GNPKYQKAAGS-DYGVFNLEDECFQTLPLPLPAEYKGRRTRI-WPPPIWILPN 124
                Y    G  D G+F L D   +    PLP   +   +R+ WPPP+WI PN
Sbjct: 343  SANNYDGHIGEHDLGIFKLSDGSIE----PLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  224 bits (572), Expect = 4e-56
 Identities = 147/415 (35%), Positives = 226/415 (54%), Gaps = 13/415 (3%)
 Frame = -2

Query: 1329 MDWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNT 1150
            MDWS  L  +L++ I+  +  ++DY+  RAV  AWR  +PK P H     P LM P   +
Sbjct: 3    MDWSQ-LPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQS 61

Query: 1149 YCDCDCDAFNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRL 973
              +    AF   ++  + H + LP+  +     GSS GWL+ LDD+ +I LINP+T+ +L
Sbjct: 62   QSNQSRRAF-FSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 972  QLPPLSTFPDVLEYNPERIGMEYSVRSIWLQKDTSKFFSLAKMKNYFIEKLVLSSSP-TE 796
             LPPLS+FP+V+ +N   IG EY++R++  ++ T    SL +M++ FI K+VLSSSP  +
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVT---VSLRQMRDSFIRKVVLSSSPLKD 177

Query: 795  KNCLAMAIFRDCNKLACCRLGDEGWKNVEGGLCHFQDIIYFNGKFYALSILGRLFIVSNA 616
             N + +AI    + LA CR GD+ W  VE      +D+I+ NG FYA++  G++ I    
Sbjct: 178  NNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVI---C 234

Query: 615  EVEASSPMPTFVIGPPDGFSCSSGKVYLVESSGELLMVDRGIKL----------GSINKN 466
            ++ + SP  +F+  P           YLV S  ELL+V R + L            +   
Sbjct: 235  DISSDSPRVSFMETPR---QAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYR 291

Query: 465  TLKFSIFKLNVYPNSLPTWSKVMSLGDRMLFLGQGESFSFSSRDLPGPWKGNHIYFTDDH 286
            T++F +F+L+    + P W ++ +LGD+ LF+G+  S S S+ D  G   GN IY+TDD+
Sbjct: 292  TIRFEVFRLDW---NGPQWLRMSTLGDKALFIGENSSLSLSATDFSG-CMGNCIYYTDDY 347

Query: 285  VLLGNPKYQKAAGS-DYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 124
            +   +  Y    G  D G+F L DE  + LP   P  +       W PP+W+ PN
Sbjct: 348  L---DANYDGHFGDHDLGIFKLCDETIEPLPC-YPRNFTSPLQ--WSPPLWVSPN 396


>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score =  212 bits (540), Expect = 2e-52
 Identities = 145/415 (34%), Positives = 222/415 (53%), Gaps = 14/415 (3%)
 Frame = -2

Query: 1326 DWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNTY 1147
            DW+ +L  DLL +I+  +  ++DY+R R V  +WR+ +PK+P       P L+ P+   Y
Sbjct: 3    DWT-ELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPL---Y 58

Query: 1146 CDCDCDAFNLFMANGEVHNVKLPKAE-HGLWRGSSKGWLVQLDDSNSINLINPVTKTRLQ 970
             DC C  FN   ++ ++H + LP+A       GSS GWL  LD++ SI L+NP+T+ + +
Sbjct: 59   HDCRCGLFNF--SDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFR 116

Query: 969  LPPLSTFPDVLEYNPERIGMEYSVRSIWLQKDTSKFF--SLAKMKNYFIEKLVLSSSPTE 796
            LPPLSTFP+V+ ++  R+G EY +R+      T   +  +L +M++ F++K+VLSSSP+ 
Sbjct: 117  LPPLSTFPNVVSFDYSRVGREYLIRT-----PTGHIYTRNLRQMRDSFVKKIVLSSSPSN 171

Query: 795  KN-CLAMAIFRDCNKLACCRLGDEGWKNVEGGLCHFQDIIYFNGKFYALSILGRLFIVSN 619
            +N  LA+AI      LA CR G   W  V+      +D+IY +G FYA+   G   +VS 
Sbjct: 172  QNDFLAVAILNHSGDLAFCRSGGGSWTFVDDAPSDCEDVIYTDGVFYAVDKYG---VVSL 228

Query: 618  AEVEASSPMPTFVIGPPDGFSCSSGKVYLVESSGELLMVDRGI---------KLGSINKN 466
             ++  S    + V         +    YLV    ELL+V R +         +L S+   
Sbjct: 229  MDLRGSRSQVSLVATER---QLAGDIQYLVRLGQELLLVSRYLDIVNDGMDDELISVMYR 285

Query: 465  TLKFSIFKLNVYPNSLPTWSKVMSLGDRMLFLGQGESFSFSSRDLPGPWKGNHIYFTDDH 286
            T++F +F++       P W KV +L +  LF+G   S +FS+ D  G   GN IY+TDD+
Sbjct: 286  TVRFEVFRMEW---EGPRWEKVENLNEMALFVGGNSSMAFSAADF-GEISGNCIYYTDDY 341

Query: 285  VLLGNPKYQ-KAAGSDYGVFNLEDECFQTLPLPLPAEYKGRRTRIWPPPIWILPN 124
                +  YQ +    D G+F L DE F+ LP      +  RR     PPIW+ PN
Sbjct: 342  ---SDSDYQGQGEEPDMGIFRLCDESFEPLPYYSGGSHSRRRLL---PPIWVTPN 390