BLASTX nr result

ID: Coptis25_contig00026926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026926
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301549.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...   128   4e-28
ref|XP_002325573.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_004162539.1| PREDICTED: uncharacterized protein LOC101226...   115   5e-24
ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   112   2e-23

>ref|XP_002301549.1| predicted protein [Populus trichocarpa] gi|222843275|gb|EEE80822.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/125 (50%), Positives = 92/125 (73%)
 Frame = -3

Query: 392 GASAWWDQIHLSHTRVGKPPIRTWMKMKRLLHGRYLPIDYDQVLFSQYHNRRQGYRTVDE 213
           GASAWW+Q+ L+  R  K  ++TW KM+RLL  +YLP+DY+Q+LF QY + RQG RTV  
Sbjct: 19  GASAWWEQLQLTRMRQRKGMVQTWAKMRRLLRAKYLPLDYEQILFQQYQDCRQGNRTVQT 78

Query: 212 YTTEFYRLASRNDLSESDSQQATKFISGLKYNIQDGIALQTAHTLGDVVRLALRAETMME 33
           Y  EF+RL+SRN+LSE+D+QQ ++F+ GL   +QD +++QT ++L + + LA +AET +E
Sbjct: 79  YVEEFHRLSSRNNLSETDAQQVSRFVGGLCLTVQDRVSMQTIYSLTEAINLATKAETQLE 138

Query: 32  RPTEI 18
           R   I
Sbjct: 139 RAKSI 143


>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score =  128 bits (322), Expect = 4e-28
 Identities = 56/122 (45%), Positives = 85/122 (69%)
 Frame = -3

Query: 401 LKVGASAWWDQIHLSHTRVGKPPIRTWMKMKRLLHGRYLPIDYDQVLFSQYHNRRQGYRT 222
           L+ GASAWWDQ+ ++  R GK P+R+W KMK+LL  R+LP +Y+Q L++QY N RQG RT
Sbjct: 287 LRAGASAWWDQLEINRQRCGKQPVRSWEKMKKLLKARFLPPNYEQTLYNQYQNCRQGVRT 346

Query: 221 VDEYTTEFYRLASRNDLSESDSQQATKFISGLKYNIQDGIALQTAHTLGDVVRLALRAET 42
           V EY  EF+RL++R +LSE++  Q  +F+ GL+++I++ + LQ    L + +  A   E 
Sbjct: 347 VAEYIEEFHRLSARTNLSENEQHQVARFVGGLRFDIKEKVRLQPFRFLSEAISFAETVEE 406

Query: 41  MM 36
           M+
Sbjct: 407 MI 408


>ref|XP_002325573.1| predicted protein [Populus trichocarpa] gi|222862448|gb|EEE99954.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/102 (53%), Positives = 75/102 (73%)
 Frame = -3

Query: 401 LKVGASAWWDQIHLSHTRVGKPPIRTWMKMKRLLHGRYLPIDYDQVLFSQYHNRRQGYRT 222
           L  GASAWW+Q+ L   R  K  ++TW KM+RLL  RYLP DY+Q+LF QY + RQG RT
Sbjct: 160 LMEGASAWWEQLQLKRMRQRKGMVQTWAKMRRLLRARYLPPDYEQILFQQYQDYRQGNRT 219

Query: 221 VDEYTTEFYRLASRNDLSESDSQQATKFISGLKYNIQDGIAL 96
           V  Y  EF+RL+SRN+LSE+D+QQ ++F+ GL+  IQD +++
Sbjct: 220 VQTYVEEFHRLSSRNNLSETDAQQVSRFVGGLRLAIQDQVSM 261


>ref|XP_004162539.1| PREDICTED: uncharacterized protein LOC101226535 [Cucumis sativus]
          Length = 311

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/124 (41%), Positives = 79/124 (63%)
 Frame = -3

Query: 401 LKVGASAWWDQIHLSHTRVGKPPIRTWMKMKRLLHGRYLPIDYDQVLFSQYHNRRQGYRT 222
           LK GAS WWDQI  +   +GK PIR+W +M +++  R+LP D++Q+L+ QY   RQ  R 
Sbjct: 6   LKSGASTWWDQIQANRRLIGKTPIRSWPRMLKMMKERFLPTDFEQILYQQYQQCRQDNRK 65

Query: 221 VDEYTTEFYRLASRNDLSESDSQQATKFISGLKYNIQDGIALQTAHTLGDVVRLALRAET 42
           V EY  EF+RL++R   +ES++ Q  +F+ GLK NI + + LQ   TL   + +  +AE 
Sbjct: 66  VAEYAKEFHRLSARTQTNESENYQIGRFVDGLKENIHEQLDLQPIATLPATISMVFKAEL 125

Query: 41  MMER 30
            +E+
Sbjct: 126 KLEK 129


>ref|XP_004134253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101214124 [Cucumis sativus]
          Length = 586

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/123 (44%), Positives = 79/123 (64%)
 Frame = -3

Query: 401 LKVGASAWWDQIHLSHTRVGKPPIRTWMKMKRLLHGRYLPIDYDQVLFSQYHNRRQGYRT 222
           L+ G SAWWDQ+  +    GK  IR+W KM RL+  R+LPI+Y Q+L++QY    QG R+
Sbjct: 137 LQGGTSAWWDQLQNNRRLFGKQSIRSWPKMLRLMKKRFLPINYQQLLYNQYQQCHQGSRS 196

Query: 221 VDEYTTEFYRLASRNDLSESDSQQATKFISGLKYNIQDGIALQTAHTLGDVVRLALRAET 42
           + +YT EFYRL +RN+L E++ QQ ++FI GL+  I+D + L     L D + LA + E 
Sbjct: 197 IMDYTEEFYRLGARNNLLETEHQQISRFIHGLRDEIKDIVHLHPLTFLSDAISLASKIED 256

Query: 41  MME 33
             E
Sbjct: 257 SEE 259


Top