BLASTX nr result

ID: Coptis25_contig00026908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026908
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524028.1| tuftelin interacting protein, putative [Rici...    60   1e-07
ref|XP_002265002.1| PREDICTED: tuftelin-interacting protein 11-l...    59   3e-07
ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-l...    59   4e-07
ref|XP_004164520.1| PREDICTED: LOW QUALITY PROTEIN: tuftelin-int...    58   7e-07

>ref|XP_002524028.1| tuftelin interacting protein, putative [Ricinus communis]
           gi|223536755|gb|EEF38396.1| tuftelin interacting
           protein, putative [Ricinus communis]
          Length = 883

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/76 (48%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = -1

Query: 348 KKRHQTKDDVLFGVFADVTXXXXXXXXXXXXXXXXXXXXXXXXDLSKPVNFVSTGTVMPN 169
           +KR QTKDDVL+GVFAD +                        DL+KPVNFVSTG VMPN
Sbjct: 33  EKRKQTKDDVLYGVFADYSDSDDDYDGGSSRKRKKDRDFGRKADLTKPVNFVSTGKVMPN 92

Query: 168 QEID--RNIQTSQKED 127
           QEID   N   S KE+
Sbjct: 93  QEIDISNNNNDSLKEE 108


>ref|XP_002265002.1| PREDICTED: tuftelin-interacting protein 11-like [Vitis vinifera]
          Length = 852

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/73 (47%), Positives = 39/73 (53%)
 Frame = -1

Query: 345 KRHQTKDDVLFGVFADVTXXXXXXXXXXXXXXXXXXXXXXXXDLSKPVNFVSTGTVMPNQ 166
           KRHQTKDDVL+GVFAD                          D +KPVNFVSTG VMP Q
Sbjct: 34  KRHQTKDDVLYGVFAD------SDSDDSSSAKKRRKDLSNKTDFTKPVNFVSTGVVMPTQ 87

Query: 165 EIDRNIQTSQKED 127
           EI+RN +    ED
Sbjct: 88  EIERNSREQVNED 100


>ref|XP_002319771.1| predicted protein [Populus trichocarpa] gi|222858147|gb|EEE95694.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%)
 Frame = -1

Query: 348 KKRHQTKDDVLFGVFADVTXXXXXXXXXXXXXXXXXXXXXXXXDLSKPVNFVSTGTVMPN 169
           +KR Q+KDDVL+G+FAD                           L+KPVNFVSTGTVMPN
Sbjct: 34  EKRKQSKDDVLYGIFADYDSDDDYVSSSRKRRKDSRKAD-----LTKPVNFVSTGTVMPN 88

Query: 168 QEIDRNIQTSQKE 130
           QEID+N++    +
Sbjct: 89  QEIDKNLRDKNSD 101


>ref|XP_003548069.1| PREDICTED: tuftelin-interacting protein 11-like [Glycine max]
          Length = 862

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/75 (46%), Positives = 41/75 (54%)
 Frame = -1

Query: 348 KKRHQTKDDVLFGVFADVTXXXXXXXXXXXXXXXXXXXXXXXXDLSKPVNFVSTGTVMPN 169
           +KR QTKDDVL+GVFAD                          DL+KPVNFVSTGT MPN
Sbjct: 33  EKRTQTKDDVLYGVFAD----SDDNDDDDYPSRKRRKDFSKKPDLTKPVNFVSTGTFMPN 88

Query: 168 QEIDRNIQTSQKEDG 124
           QEID   +   ++DG
Sbjct: 89  QEIDNKSKEQDEKDG 103


>ref|XP_004164520.1| PREDICTED: LOW QUALITY PROTEIN: tuftelin-interacting protein
           11-like [Cucumis sativus]
          Length = 872

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/78 (44%), Positives = 43/78 (55%)
 Frame = -1

Query: 348 KKRHQTKDDVLFGVFADVTXXXXXXXXXXXXXXXXXXXXXXXXDLSKPVNFVSTGTVMPN 169
           +KR QTK+DV++GVFA  +                        DL+KPVNFVSTGTVMPN
Sbjct: 33  EKRSQTKEDVVYGVFATGSDSDSDGDGFSSRKRRKDRDLSRKPDLTKPVNFVSTGTVMPN 92

Query: 168 QEIDRNIQTSQKEDGDAE 115
           QEIDR       +DGD +
Sbjct: 93  QEIDR-----ISKDGDTD 105


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