BLASTX nr result

ID: Coptis25_contig00026897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026897
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590818.1| PGPS/D12 [Medicago truncatula] gi|355479866|...   182   2e-44
ref|XP_003535433.1| PREDICTED: cell number regulator 10-like [Gl...   172   3e-41
ref|XP_003575228.1| PREDICTED: cell number regulator 2-like [Bra...   147   9e-34
dbj|BAK01385.1| predicted protein [Hordeum vulgare subsp. vulgare]    138   5e-31
dbj|BAK04959.1| predicted protein [Hordeum vulgare subsp. vulgare]    138   5e-31

>ref|XP_003590818.1| PGPS/D12 [Medicago truncatula] gi|355479866|gb|AES61069.1| PGPS/D12
           [Medicago truncatula]
          Length = 137

 Score =  182 bits (463), Expect = 2e-44
 Identities = 81/124 (65%), Positives = 94/124 (75%)
 Frame = +1

Query: 28  MNVQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYG 207
           MN+   S   KWS+ LCG   ++ GTC ITCCLPC+TFGQIAE++DEG+SSCA    +YG
Sbjct: 1   MNIFGRSSPPKWSAKLCGC-GENPGTCLITCCLPCITFGQIAEVVDEGRSSCAMQGCVYG 59

Query: 208 LLMLCQCHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFRGLDPSK 387
           LLM   CH LY  +YREKLR K+ LPAEPC DCCVH+CC  CALCQEHAEL  RG +PSK
Sbjct: 60  LLMTITCHWLYSCLYREKLRAKYGLPAEPCCDCCVHFCCDACALCQEHAELKARGFNPSK 119

Query: 388 GWIG 399
           GWIG
Sbjct: 120 GWIG 123


>ref|XP_003535433.1| PREDICTED: cell number regulator 10-like [Glycine max]
          Length = 136

 Score =  172 bits (435), Expect = 3e-41
 Identities = 78/114 (68%), Positives = 86/114 (75%)
 Frame = +1

Query: 58  KWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLLMLCQCHCL 237
           KWS+  C    +D  TC ITCCLPCVTFGQIAE++DEG+SSC      YGLLML  CH L
Sbjct: 10  KWSAKFCDC-GEDPKTCLITCCLPCVTFGQIAEIVDEGRSSCFGQGCAYGLLMLVTCHWL 68

Query: 238 YGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFRGLDPSKGWIG 399
           Y  +YREKLR KF LPAEPC DCCV++CC  CALCQEHAEL  RG DPSKGWIG
Sbjct: 69  YSCLYREKLRSKFGLPAEPCCDCCVNFCCEACALCQEHAELKARGFDPSKGWIG 122


>ref|XP_003575228.1| PREDICTED: cell number regulator 2-like [Brachypodium distachyon]
          Length = 187

 Score =  147 bits (371), Expect = 9e-34
 Identities = 62/121 (51%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = +1

Query: 34  VQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLL 213
           +Q    Q+ WS+GLC   D D G C +TC  PC+TFGQ+AE++D G SSC S   +Y L+
Sbjct: 44  MQGAQAQAAWSTGLCDCFD-DCGNCCVTCLCPCITFGQVAEIIDRGSSSCGSSGALYALI 102

Query: 214 MLCQ-CHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFRGLDPSKG 390
           ML   CHC+Y   YR K+R ++ L   PC DCC+HWCC  CALCQE+ EL  RG D + G
Sbjct: 103 MLLTGCHCVYSCFYRAKMRAQYGLQERPCADCCIHWCCEPCALCQEYRELKKRGFDMNLG 162

Query: 391 W 393
           W
Sbjct: 163 W 163


>dbj|BAK01385.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 187

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = +1

Query: 34  VQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLL 213
           +Q+ +  + WS+GLC   D D   C +TC  PCVTFGQIAE++D G +SC +   +Y L+
Sbjct: 44  MQAQAPLAAWSTGLCDCFD-DCSNCCVTCLCPCVTFGQIAEIIDRGSTSCGASGALYALI 102

Query: 214 M-LCQCHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFRGLDPSKG 390
           M L  C C+Y   YR K+R  + L   PC DCC+HWCC  CALCQE+ EL  RG D + G
Sbjct: 103 MCLTGCQCVYSCFYRAKMRAHYGLQESPCADCCIHWCCEPCALCQEYRELKKRGFDMNLG 162

Query: 391 W 393
           W
Sbjct: 163 W 163


>dbj|BAK04959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 246

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = +1

Query: 34  VQSHSQQSKWSSGLCGPEDQDVGTCFITCCLPCVTFGQIAEMLDEGQSSCASHAVMYGLL 213
           +Q+ +  + WS+GLC   D D   C +TC  PCVTFGQIAE++D G +SC +   +Y L+
Sbjct: 103 MQAQAPLAAWSTGLCDCFD-DCSNCCVTCLCPCVTFGQIAEIIDRGSTSCGASGALYALI 161

Query: 214 M-LCQCHCLYGAVYREKLRMKFSLPAEPCGDCCVHWCCGNCALCQEHAELTFRGLDPSKG 390
           M L  C C+Y   YR K+R  + L   PC DCC+HWCC  CALCQE+ EL  RG D + G
Sbjct: 162 MCLTGCQCVYSCFYRAKMRAHYGLQESPCADCCIHWCCEPCALCQEYRELKKRGFDMNLG 221

Query: 391 W 393
           W
Sbjct: 222 W 222


Top