BLASTX nr result

ID: Coptis25_contig00026895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026895
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282520.1| PREDICTED: uncharacterized protein LOC100261...   307   2e-81
ref|XP_002309428.1| hypothetical protein POPTRDRAFT_416266 [Popu...   295   5e-78
ref|XP_004149203.1| PREDICTED: uncharacterized protein LOC101204...   287   1e-75
ref|XP_002873122.1| hypothetical protein ARALYDRAFT_487166 [Arab...   282   6e-74
ref|NP_568128.1| thioredoxin family protein [Arabidopsis thalian...   282   6e-74

>ref|XP_002282520.1| PREDICTED: uncharacterized protein LOC100261348 [Vitis vinifera]
           gi|297740119|emb|CBI30301.3| unnamed protein product
           [Vitis vinifera]
          Length = 333

 Score =  307 bits (786), Expect = 2e-81
 Identities = 147/189 (77%), Positives = 153/189 (80%)
 Frame = +3

Query: 3   CPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDS 182
           CPFCRKVREIVAVLDLDVL+YPCPRNGPNFRPKV QMGGKQQFPYMVDPNTGVAMYESD 
Sbjct: 144 CPFCRKVREIVAVLDLDVLFYPCPRNGPNFRPKVAQMGGKQQFPYMVDPNTGVAMYESDD 203

Query: 183 IINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEAS 362
           II YLVGKYGDG VP            EGFAMIGRMGKGSSY PSKLPP+P+ELWAYEAS
Sbjct: 204 IIKYLVGKYGDGNVPFMLSLGLLTTLTEGFAMIGRMGKGSSYTPSKLPPKPLELWAYEAS 263

Query: 363 PFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQKAGHFQVPYLEDPNTGVKMFESAEIV 542
           PFCK                SCARGSPKRQ+LYQKA HFQ PYLEDPNTGVKMFESAEIV
Sbjct: 264 PFCKVVREVIVELELPHILRSCARGSPKRQLLYQKARHFQAPYLEDPNTGVKMFESAEIV 323

Query: 543 DYLRATYVL 569
           +YL+ATY L
Sbjct: 324 EYLKATYAL 332



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQKAGHFQVPYLED 500
           P +P+E++ +E+ PFC+               + C R  P  R  + Q  G  Q PY+ D
Sbjct: 132 PEKPIEIYEFESCPFCRKVREIVAVLDLDVLFYPCPRNGPNFRPKVAQMGGKQQFPYMVD 191

Query: 501 PNTGVKMFESAEIVDYLRATY 563
           PNTGV M+ES +I+ YL   Y
Sbjct: 192 PNTGVAMYESDDIIKYLVGKY 212


>ref|XP_002309428.1| hypothetical protein POPTRDRAFT_416266 [Populus trichocarpa]
           gi|222855404|gb|EEE92951.1| hypothetical protein
           POPTRDRAFT_416266 [Populus trichocarpa]
          Length = 287

 Score =  295 bits (756), Expect = 5e-78
 Identities = 138/187 (73%), Positives = 150/187 (80%)
 Frame = +3

Query: 3   CPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDS 182
           CPFCRKVREIVAVLDLDVL+YPCP+NGPNFRPKV QMGGKQQFPYMVDPNTG AMYESD 
Sbjct: 100 CPFCRKVREIVAVLDLDVLFYPCPKNGPNFRPKVAQMGGKQQFPYMVDPNTGTAMYESDD 159

Query: 183 IINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEAS 362
           II YLV KYGDG++P            EGFAMIGRMGKGSSY PSKLPP+P+ELWAYE S
Sbjct: 160 IIKYLVQKYGDGSIPFTLSLGLLTTLTEGFAMIGRMGKGSSYTPSKLPPKPLELWAYEGS 219

Query: 363 PFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQKAGHFQVPYLEDPNTGVKMFESAEIV 542
           PFCK                SCARGSPKRQIL++KAGHFQ PY+EDPNTGV+MFESAEIV
Sbjct: 220 PFCKIVREVLVELELPHIFRSCARGSPKRQILFEKAGHFQAPYIEDPNTGVQMFESAEIV 279

Query: 543 DYLRATY 563
           +YL+ TY
Sbjct: 280 EYLKVTY 286



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQKAGHFQVPYLED 500
           P +P+E++ +E  PFC+               + C +  P  R  + Q  G  Q PY+ D
Sbjct: 88  PEKPIEIYEFEGCPFCRKVREIVAVLDLDVLFYPCPKNGPNFRPKVAQMGGKQQFPYMVD 147

Query: 501 PNTGVKMFESAEIVDYLRATY 563
           PNTG  M+ES +I+ YL   Y
Sbjct: 148 PNTGTAMYESDDIIKYLVQKY 168


>ref|XP_004149203.1| PREDICTED: uncharacterized protein LOC101204318 [Cucumis sativus]
           gi|449500909|ref|XP_004161227.1| PREDICTED:
           uncharacterized LOC101204318 [Cucumis sativus]
          Length = 338

 Score =  287 bits (735), Expect = 1e-75
 Identities = 135/189 (71%), Positives = 148/189 (78%)
 Frame = +3

Query: 3   CPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDS 182
           CPFCRKVREIVAVLDLD+L+YPCPRNGPNFRPKV+QMGGKQQFPYMVDPNTGV+MYESD 
Sbjct: 150 CPFCRKVREIVAVLDLDILFYPCPRNGPNFRPKVLQMGGKQQFPYMVDPNTGVSMYESDD 209

Query: 183 IINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEAS 362
           II YLV  YGDG VP            EGFAMIGR+G+GS Y PSKLPP P+E+WAYE S
Sbjct: 210 IIKYLVQNYGDGNVPLFLSLGLLTTLSEGFAMIGRLGRGSIYKPSKLPPAPLEIWAYEGS 269

Query: 363 PFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQKAGHFQVPYLEDPNTGVKMFESAEIV 542
           PFCK                 CARGSPKRQ LY+K GHFQVPYL+DPNTGV+MFESAEIV
Sbjct: 270 PFCKLVREVLVELELPHLVRCCARGSPKRQQLYEKEGHFQVPYLDDPNTGVRMFESAEIV 329

Query: 543 DYLRATYVL 569
           +YL+ATY L
Sbjct: 330 EYLQATYAL 338



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQKAGHFQVPYLED 500
           P +P+E++ +E+ PFC+               + C R  P  R  + Q  G  Q PY+ D
Sbjct: 138 PEKPIEIYEFESCPFCRKVREIVAVLDLDILFYPCPRNGPNFRPKVLQMGGKQQFPYMVD 197

Query: 501 PNTGVKMFESAEIVDYLRATY 563
           PNTGV M+ES +I+ YL   Y
Sbjct: 198 PNTGVSMYESDDIIKYLVQNY 218


>ref|XP_002873122.1| hypothetical protein ARALYDRAFT_487166 [Arabidopsis lyrata subsp.
           lyrata] gi|297318959|gb|EFH49381.1| hypothetical protein
           ARALYDRAFT_487166 [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score =  282 bits (721), Expect = 6e-74
 Identities = 133/187 (71%), Positives = 144/187 (77%)
 Frame = +3

Query: 3   CPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDS 182
           CPFCRKVRE+VAVLDLD+LYYPCPR  PNFRPKV QMGGKQQFPYMVDPNTGV+MYESD 
Sbjct: 148 CPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVDPNTGVSMYESDG 207

Query: 183 IINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEAS 362
           II YL  KYGDGTVP             GFAMIGRMGKG+ Y P+KLPP+P+E WAYE S
Sbjct: 208 IIKYLSEKYGDGTVPLSLSLGALTAITAGFAMIGRMGKGNLYTPAKLPPKPLEFWAYEGS 267

Query: 363 PFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQKAGHFQVPYLEDPNTGVKMFESAEIV 542
           PFCK                SCARGSPKRQ+L +KAGHFQVPYLEDPNTGV MFESAEIV
Sbjct: 268 PFCKLVREVLVELELPHIQRSCARGSPKRQVLLEKAGHFQVPYLEDPNTGVAMFESAEIV 327

Query: 543 DYLRATY 563
           +YL+ TY
Sbjct: 328 EYLKQTY 334



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQKAGHFQVPYLED 500
           P +P+E++ +E  PFC+               + C RGSP  R  + Q  G  Q PY+ D
Sbjct: 136 PEKPIEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVD 195

Query: 501 PNTGVKMFESAEIVDYLRATY 563
           PNTGV M+ES  I+ YL   Y
Sbjct: 196 PNTGVSMYESDGIIKYLSEKY 216


>ref|NP_568128.1| thioredoxin family protein [Arabidopsis thaliana]
           gi|15451054|gb|AAK96798.1| Unknown protein [Arabidopsis
           thaliana] gi|20148315|gb|AAM10048.1| unknown protein
           [Arabidopsis thaliana] gi|332003283|gb|AED90666.1|
           thioredoxin family protein [Arabidopsis thaliana]
          Length = 339

 Score =  282 bits (721), Expect = 6e-74
 Identities = 133/187 (71%), Positives = 144/187 (77%)
 Frame = +3

Query: 3   CPFCRKVREIVAVLDLDVLYYPCPRNGPNFRPKVVQMGGKQQFPYMVDPNTGVAMYESDS 182
           CPFCRKVRE+VAVLDLD+LYYPCPR  PNFRPKV QMGGKQQFPYMVDPNTGV+MYESD 
Sbjct: 151 CPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVDPNTGVSMYESDG 210

Query: 183 IINYLVGKYGDGTVPXXXXXXXXXXXXEGFAMIGRMGKGSSYIPSKLPPEPVELWAYEAS 362
           II YL  KYGDGTVP             GFAMIGRMGKG+ Y P+KLPP+P+E WAYE S
Sbjct: 211 IIKYLSEKYGDGTVPLSLSLGALTAITAGFAMIGRMGKGNLYTPAKLPPKPLEFWAYEGS 270

Query: 363 PFCKXXXXXXXXXXXXXXXHSCARGSPKRQILYQKAGHFQVPYLEDPNTGVKMFESAEIV 542
           PFCK                SCARGSPKRQ+L +KAGHFQVPYLEDPNTGV MFESAEIV
Sbjct: 271 PFCKLVREVLVELELPHIQRSCARGSPKRQVLLEKAGHFQVPYLEDPNTGVAMFESAEIV 330

Query: 543 DYLRATY 563
           +YL+ TY
Sbjct: 331 EYLKQTY 337



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 324 PPEPVELWAYEASPFCKXXXXXXXXXXXXXXXHSCARGSPK-RQILYQKAGHFQVPYLED 500
           P +P+E++ +E  PFC+               + C RGSP  R  + Q  G  Q PY+ D
Sbjct: 139 PEKPIEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVD 198

Query: 501 PNTGVKMFESAEIVDYLRATY 563
           PNTGV M+ES  I+ YL   Y
Sbjct: 199 PNTGVSMYESDGIIKYLSEKY 219


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