BLASTX nr result

ID: Coptis25_contig00026891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026891
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277486.1| PREDICTED: uncharacterized protein LOC100250...    71   1e-10
ref|XP_002525659.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002277486.1| PREDICTED: uncharacterized protein LOC100250230 [Vitis vinifera]
           gi|297745882|emb|CBI15938.3| unnamed protein product
           [Vitis vinifera]
          Length = 77

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
 Frame = +2

Query: 17  MRVGLRFWWSLLFALGVLLCSAASRNTILVPGNEKMVVVGGGTGRSLK-LQTDDYDDPSA 193
           M  G R WW + FA   L+C+A  RNT++ P +E+     G  GR LK + TDDY DPSA
Sbjct: 1   MGFGNRLWWCVFFA-SFLICTA--RNTLIFPVDEE---AAGAVGRRLKAVSTDDYSDPSA 54

Query: 194 NKGHDPKNK--GGGDSGRN 244
           NKGHDP+N+  GGG  GR+
Sbjct: 55  NKGHDPRNRIGGGGWKGRD 73


>ref|XP_002525659.1| conserved hypothetical protein [Ricinus communis]
           gi|223535095|gb|EEF36777.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 91

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = +2

Query: 14  DMRVGLRFWWSLLFALGVLLCSAASRNTILVPGNEKMVVVGGGTGRSLKLQTDDYDDPSA 193
           D  VGL F   L+FAL      +++RN I +  N    +    TGRSLK   +DY +PSA
Sbjct: 2   DKGVGLCFCLLLVFAL-----LSSARNPIPISENG---IALANTGRSLKAMLNDYSEPSA 53

Query: 194 NKGHDPKNKGGGDSG 238
           N+GHDP++K G ++G
Sbjct: 54  NQGHDPRSKDGNNNG 68


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