BLASTX nr result

ID: Coptis25_contig00026856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026856
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261...   150   2e-34
ref|XP_003545979.1| PREDICTED: uncharacterized protein LOC100792...   147   2e-33
ref|XP_002531900.1| hypothetical protein RCOM_0402290 [Ricinus c...   141   8e-32
emb|CBI24883.3| unnamed protein product [Vitis vinifera]              141   1e-31
ref|XP_003599451.1| hypothetical protein MTR_3g033530 [Medicago ...   129   5e-28

>ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261971 [Vitis vinifera]
          Length = 354

 Score =  150 bits (379), Expect = 2e-34
 Identities = 94/194 (48%), Positives = 118/194 (60%), Gaps = 14/194 (7%)
 Frame = +3

Query: 75  DEEALFNSYHCPVLYYVQSPSTISHANSNECRNSDTTVLSPYRTENFITTRPSNPNHDVA 254
           +++ALF++Y C   YYVQSPST+S ANS +C+N+ +T  SP R+E F+   P+N + +V 
Sbjct: 4   EDQALFHAYPCA--YYVQSPSTLSRANSADCQNNLSTCHSPLRSETFMNN-PTNTSQEVN 60

Query: 255 RF-ILSRYSS--HGSNNTFLHEKKIS-YDLQSHETGATTENGAL----------LRMCGS 392
           RF  LSRYSS   GSNN+FLHEKKI  YD QS  TG  TENG            + + G 
Sbjct: 61  RFSYLSRYSSSSRGSNNSFLHEKKIVLYDAQSQGTG--TENGENGENRRRMSVGMEVDGG 118

Query: 393 EEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCWRFFSFDTSSTCCWFFLQLSWRFMVSLG 572
            E     +D  E+E           K    G WR+FSF TSS+C W  LQ+SWR MVSLG
Sbjct: 119 GEEGGGGDD--EEEEYYYGRSSFSSKSGGGGWWRYFSFRTSSSCLWICLQISWRLMVSLG 176

Query: 573 VALLVFFLATNPPP 614
            ALLVF +AT PPP
Sbjct: 177 AALLVFCIATKPPP 190


>ref|XP_003545979.1| PREDICTED: uncharacterized protein LOC100792233 [Glycine max]
          Length = 358

 Score =  147 bits (370), Expect = 2e-33
 Identities = 93/196 (47%), Positives = 122/196 (62%), Gaps = 14/196 (7%)
 Frame = +3

Query: 69  VEDEEAL-FNSYHCPVLYYVQSPSTISHANSNECRNS-----DTTVLSPYRTENFITTRP 230
           VED EAL + +Y C   YYVQSPST+SHANS + R++     ++T  SP R+E   TT P
Sbjct: 13  VEDHEALMYQNYPCA--YYVQSPSTLSHANSADIRSNIQNDAESTFHSPNRSE---TTHP 67

Query: 231 SNPNHD---VARFILSRY-SSHGSNNTFLHEKKISYDLQSHETGATTENGALLRMC---G 389
            NP H+    +RF L RY SS GS+++FLH KKISYD  SH T   TENG + R+    G
Sbjct: 68  LNPTHEEDEASRFALCRYTSSRGSSHSFLHHKKISYD-GSHATA--TENGDVNRLVIIDG 124

Query: 390 SEEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCW-RFFSFDTSSTCCWFFLQLSWRFMVS 566
             + K   N++VE+       YG     + KG W RFFS+  S +C W +LQ+ WR +VS
Sbjct: 125 GGDDKGDENENVEEGSFYEYYYG-----KRKGGWKRFFSYRNSDSCAWIWLQMGWRILVS 179

Query: 567 LGVALLVFFLATNPPP 614
            G+ALLVF++AT PPP
Sbjct: 180 FGIALLVFYIATKPPP 195


>ref|XP_002531900.1| hypothetical protein RCOM_0402290 [Ricinus communis]
           gi|223528440|gb|EEF30473.1| hypothetical protein
           RCOM_0402290 [Ricinus communis]
          Length = 188

 Score =  141 bits (356), Expect = 8e-32
 Identities = 89/195 (45%), Positives = 117/195 (60%), Gaps = 5/195 (2%)
 Frame = +3

Query: 45  MANQKIENVEDEEALFNSYHCPVLYYVQSPSTISHANSNECR---NSDTTVLSPYRTENF 215
           MA  +  + ED+E LF ++ C   YYVQSPST+SHANS+E +   N ++T  SP R++  
Sbjct: 1   MATHRKMDSEDQETLFQAFPCA--YYVQSPSTVSHANSSELKTQINLESTFHSPSRSDTA 58

Query: 216 ITTRPSNPNHDVARFILSRYSS-HGSNNTFLHEKKISYDLQSHETGATTENGALLRMCGS 392
           I     N N +V+ F LSRYSS  GSNN+FL+EKK+S D   HE G        L +   
Sbjct: 59  ILL---NKNPEVSGFTLSRYSSSRGSNNSFLNEKKVSGD---HENGVNR-----LIIVDG 107

Query: 393 EEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCW-RFFSFDTSSTCCWFFLQLSWRFMVSL 569
               D+   + E+E      Y   + GR  G W R+FSF  SS+C W  LQ+SWR +VSL
Sbjct: 108 HGLVDIHGKYGEEEEEDDDDY---YYGRKGGFWWRYFSFKRSSSCAWVSLQISWRLLVSL 164

Query: 570 GVALLVFFLATNPPP 614
           GVALLVF++AT PPP
Sbjct: 165 GVALLVFYIATKPPP 179


>emb|CBI24883.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  141 bits (355), Expect = 1e-31
 Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
 Frame = +3

Query: 75  DEEALFNSYHCPVLYYVQSPSTISHANSNECRNSDTTVLSPYRTENFITTRPSNPNHDVA 254
           +++ALF++Y C   YYVQSPST+S ANS +C+N+ +T  SP R+E F+   P+N + +V 
Sbjct: 4   EDQALFHAYPCA--YYVQSPSTLSRANSADCQNNLSTCHSPLRSETFMNN-PTNTSQEVN 60

Query: 255 RF-ILSRYSS--HGSNNTFLHEKKISYDLQSHETGATTENGALLRMCGSEEHKDVANDHV 425
           RF  LSRYSS   GSNN+FLHEKKI   L+    G   + G           ++      
Sbjct: 61  RFSYLSRYSSSSRGSNNSFLHEKKIV--LRRMSVGMEVDGGG----------EEGGGGDD 108

Query: 426 EQEVXXXXXYGIEWKGRSKGCWRFFSFDTSSTCCWFFLQLSWRFMVSLGVALLVFFLATN 605
           E+E           K    G WR+FSF TSS+C W  LQ+SWR MVSLG ALLVF +AT 
Sbjct: 109 EEEEYYYGRSSFSSKSGGGGWWRYFSFRTSSSCLWICLQISWRLMVSLGAALLVFCIATK 168

Query: 606 PPP 614
           PPP
Sbjct: 169 PPP 171


>ref|XP_003599451.1| hypothetical protein MTR_3g033530 [Medicago truncatula]
           gi|355488499|gb|AES69702.1| hypothetical protein
           MTR_3g033530 [Medicago truncatula]
          Length = 350

 Score =  129 bits (323), Expect = 5e-28
 Identities = 84/191 (43%), Positives = 108/191 (56%), Gaps = 10/191 (5%)
 Frame = +3

Query: 69  VEDEEAL-FNSYHCPVLYYVQSPSTISHANS-----NECRNSDTTVLSPYRTENFITTRP 230
           VED E L + +Y C   YYVQSPST+SHANS     N   ++++T  SP R+E    T P
Sbjct: 14  VEDHETLTYQTYPCG--YYVQSPSTVSHANSIDKHSNIQNDTESTFHSPNRSE----TLP 67

Query: 231 SNPNHDVA--RFILSRYSS-HGSNNTFLHEKKISYDLQSHETGATTENGALLRMCGSEEH 401
            NP H+    RF L RYSS  GSNN+FLH KK+SYD      G  TENG    +    + 
Sbjct: 68  INPVHEQEPNRFALCRYSSSRGSNNSFLHHKKVSYD------GTATENGDDHHLMIVNDS 121

Query: 402 KDVANDHVEQEVXXXXXYGIEWKGRSKGCW-RFFSFDTSSTCCWFFLQLSWRFMVSLGVA 578
             V +D  E+ +     Y         G W R+FS+  S +C W +LQ++WR MVS G A
Sbjct: 122 GSVVSDEEEKGLFDEYYY------EKNGGWKRYFSYHNSDSCAWIWLQVTWRVMVSFGFA 175

Query: 579 LLVFFLATNPP 611
           LLVF++AT PP
Sbjct: 176 LLVFYIATKPP 186


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