BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026850
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40755.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   1e-33
ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containi...   146   1e-33
tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea m...   145   3e-33

>emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/112 (64%), Positives = 89/112 (79%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CAD A L LGNQI+AQ  K+G  +N+SV N ++TMYS+CG+IEEAQ++F SI   NL+SW
Sbjct: 489 CADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSW 548

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGK 336
           NAM++GYAQNGQG K ++IFE ML  G  PD ISYV+VLSGCSHSG V EG+
Sbjct: 549 NAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQ 600



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKC--------------------- 117
           C     + +G Q+ A T   G+D+++ V N ++TMY+KC                     
Sbjct: 357 CLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISW 416

Query: 118 ----------GRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESMLKSGLA 267
                     G +E+A+E FD + E N+ISWN+M++ Y Q G   + ++++  ML+ G+ 
Sbjct: 417 TAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 476

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
            D I++   +S C+   +++ G Q
Sbjct: 477 TDWITFSTSISACADLAVLILGNQ 500



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/106 (35%), Positives = 64/106 (60%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CA   ++ +  ++ AQ   +G+ ++I + N ++ MYS CG I +A  VF  I   N+ SW
Sbjct: 14  CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 73

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSG 318
           N MISG+A +GQ  +A ++FE M +     D +S+ +++SG  H+G
Sbjct: 74  NTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNG 115



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/113 (31%), Positives = 60/113 (53%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           C     L  G  + A+  ++    ++    G+I MY+KCGR+E A++VFD ++E N +SW
Sbjct: 256 CTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSW 315

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGKQ 339
            ++I G AQ G   +A+ +F  M +  +A D  +   VL  C     +  G+Q
Sbjct: 316 TSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ 368



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = +1

Query: 88  NGMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESMLKSGLA 267
           N MI  YSK G +++A E+F  + E + +SWN MIS  +Q+G G + +  F  M   G  
Sbjct: 184 NSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFR 243

Query: 268 PDHISYVAVLSGCS 309
           P+ ++Y +VLS C+
Sbjct: 244 PNSMTYASVLSACT 257


>ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449492832|ref|XP_004159115.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 663

 Score =  154 bits (388), Expect = 9e-36
 Identities = 67/112 (59%), Positives = 92/112 (82%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           C++ A  +LG QI++Q  K+G+ +++SVVN  IT+YS+CGRIEEAQ +FDSI E NLISW
Sbjct: 368 CSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISW 427

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGK 336
           N+++ GYAQNG+G K ++IF++ML +G  PDHI+Y+A+LSGCSHSGLV E K
Sbjct: 428 NSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAK 479



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 31/144 (21%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCG-------------------- 120
           C     + +G Q+   T K G+++++ V N  ++MY+KCG                    
Sbjct: 236 CEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISW 295

Query: 121 -----------RIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESMLKSGLA 267
                       +E A++ F+ + E N+ISWNAM+  Y QN    + ++++  ML+  + 
Sbjct: 296 TTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVR 355

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
           PD I++V ++  CS   +   G Q
Sbjct: 356 PDWITFVTMIGACSELAISKLGTQ 379



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/113 (28%), Positives = 60/113 (53%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CA+    + G  + A+  ++    ++ V NG++ MY+KCG I+ ++ VF+++ E N+++W
Sbjct: 135 CANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTW 194

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGKQ 339
            ++ISG A  G   +   IF  M K  +  D+     +L  C     +  G+Q
Sbjct: 195 TSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQ 247



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/107 (32%), Positives = 57/107 (53%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           C+    +R+ +Q+   + K G   N  + N +I MY KC  I  A++VF  I + +L SW
Sbjct: 3   CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGL 321
           N MI GY++  +  +A+  F  M +     D +S+  ++S  SH GL
Sbjct: 63  NCMIYGYSKLHEMGRAIDTFRQMPER----DSVSWNTIISAFSHHGL 105


>dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/112 (59%), Positives = 88/112 (78%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CAD    +LG+QI   T K+G+  + SV+N +ITMYSKCGRI EA+++FD +S  +L+SW
Sbjct: 538 CADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSW 597

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGK 336
           NAMI+GY+Q+G G +A++IF+ MLK G  PD+ISYVAVLS CSHSGLV EGK
Sbjct: 598 NAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGK 649



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/104 (30%), Positives = 59/104 (56%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CA  ++L  G Q+ AQ  +     +  V + M+ +Y+KCG  +EA+ VF S+ + N +SW
Sbjct: 304 CAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSW 363

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSH 312
             +I G+ Q G  ++++++F  M    +  D  +   ++SGCS+
Sbjct: 364 TVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN 407



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = +1

Query: 91  GMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESML-KSGLA 267
           GM+T YS+ G I +A+E FD +S  N+I+WNAM+  Y Q+G     ++++ +ML +  + 
Sbjct: 466 GMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVI 525

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
           PD ++YV +  GC+  G    G Q
Sbjct: 526 PDWVTYVTLFRGCADMGANKLGDQ 549



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 49/84 (58%)
 Frame = +1

Query: 88  NGMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESMLKSGLA 267
           N M+  Y+K   ++ A E+F+S+ E +++SWN M+S  +Q+G+  +A+ +   M   G+ 
Sbjct: 232 NSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVR 291

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
            D  +Y + L+ C+    +  GKQ
Sbjct: 292 LDSTTYTSSLTACAKLSSLGWGKQ 315


>ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/112 (60%), Positives = 88/112 (78%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CAD    +LG+QII  T K+G+  + SVVN +ITMYSKCGRI EA++ FD +S  +L+SW
Sbjct: 535 CADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSW 594

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGK 336
           NAMI+GY+Q+G G +A++IF+ +L  G  PD+ISYVAVLSGCSHSGLV EGK
Sbjct: 595 NAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGK 646



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/113 (30%), Positives = 62/113 (54%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CA  ++L  G Q+  Q  +     +  V + M+ +Y+KCG  +EA+ VF S+ + N +SW
Sbjct: 301 CARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSW 360

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGKQ 339
             +I G+ Q G  +++V++F  M    +A D  +   ++SGC ++  +  G Q
Sbjct: 361 TVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQ 413



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +1

Query: 91  GMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESML-KSGLA 267
           GMIT YS+ G I +A+E FD +S  N+I+WNAM+  Y Q+G     ++++  ML +  + 
Sbjct: 463 GMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVI 522

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
           PD ++YV +  GC+  G    G Q
Sbjct: 523 PDWVTYVTLFRGCADIGANKLGDQ 546



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 49/84 (58%)
 Frame = +1

Query: 88  NGMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESMLKSGLA 267
           N M+  Y+K   ++ A E+F S+ E +++SWN +IS  +++G+  +A+ +   M   G+ 
Sbjct: 229 NSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVR 288

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
           PD  +Y + L+ C+    +  GKQ
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQ 312



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = +1

Query: 67  DANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFES 246
           + N+   N M+  Y+K G + +A E+F  +   ++ SWN ++SGY Q+GQ   A+ IF S
Sbjct: 89  EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148

Query: 247 MLKSG-LAPDHISYVAVLSGCSHSG 318
           M ++G   P+  ++  V+  C   G
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALG 173


>tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  145 bits (366), Expect = 3e-33
 Identities = 67/112 (59%), Positives = 90/112 (80%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CAD    +LG+QII +T K+G+  + SV N +ITMYSKCGRI EA++VFD ++  +++SW
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 573

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGCSHSGLVMEGK 336
           NAMI+GY+Q+G G +A++IF+ +LK G  PD+ISYVAVLSGCSHSGLV EGK
Sbjct: 574 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = +1

Query: 94  MITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESML-KSGLAP 270
           MIT YS+ G + +A+E FD +SE N+I+WNAM+  Y Q+G     +++++ ML +  + P
Sbjct: 443 MITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 502

Query: 271 DHISYVAVLSGCSHSGLVMEGKQ 339
           D ++YV +  GC+  G    G Q
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQ 525



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/102 (31%), Positives = 59/102 (57%)
 Frame = +1

Query: 1   CADSATLRLGNQIIAQTTKIGVDANISVVNGMITMYSKCGRIEEAQEVFDSISEMNLISW 180
           CA  ++LR G Q+ AQ  +     +  V + ++ +Y+K G  +EA+ VF+S+ + N ++W
Sbjct: 280 CARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAW 339

Query: 181 NAMISGYAQNGQGTKAVQIFESMLKSGLAPDHISYVAVLSGC 306
             +ISG+ Q G  T++V++F  M    +  D  +   ++SGC
Sbjct: 340 TVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/84 (32%), Positives = 48/84 (57%)
 Frame = +1

Query: 88  NGMITMYSKCGRIEEAQEVFDSISEMNLISWNAMISGYAQNGQGTKAVQIFESMLKSGLA 267
           N M+  Y K   ++ A E+FDS+ E +++SWN M+S  +Q+G+  +A+ +   M   G+ 
Sbjct: 208 NSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267

Query: 268 PDHISYVAVLSGCSHSGLVMEGKQ 339
            D  +Y + L+ C+    +  GKQ
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQ 291