BLASTX nr result

ID: Coptis25_contig00026845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026845
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
gb|ABK93694.1| unknown [Populus trichocarpa]                          175   4e-42
ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|22352896...   174   1e-41
gb|AFK37322.1| unknown [Lotus japonicus]                              171   5e-41
ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vin...   170   2e-40

>ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|222841502|gb|EEE79049.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  177 bits (448), Expect = 1e-42
 Identities = 79/112 (70%), Positives = 95/112 (84%)
 Frame = +3

Query: 6   AASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALNMAIGILS 185
           A SYWFC+APAVGASGAIFG+VGS AVFV+RHR + GGG EDLQ +A+VI LNM IG+L+
Sbjct: 207 AMSYWFCRAPAVGASGAIFGLVGSLAVFVIRHRRMIGGGKEDLQNIAKVIFLNMMIGLLT 266

Query: 186 KGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 341
           KGIDNWGH+GGLLGG ATSW +GPAW+Y  +S DGR ++ D+API YLT+ K
Sbjct: 267 KGIDNWGHLGGLLGGVATSWFVGPAWQYGPQSHDGRRVFVDKAPIRYLTNRK 318


>gb|ABK93694.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  175 bits (444), Expect = 4e-42
 Identities = 78/112 (69%), Positives = 95/112 (84%)
 Frame = +3

Query: 6   AASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALNMAIGILS 185
           A SYWFC+APAVGASGAIFG+VGS AVFV+RHR + GG  EDLQ +A+VI LNM IG+L+
Sbjct: 207 AMSYWFCRAPAVGASGAIFGLVGSLAVFVIRHRRMIGGAKEDLQNIAKVIFLNMMIGLLT 266

Query: 186 KGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 341
           KGIDNWGH+GGLLGG ATSW +GPAW+Y ++S DGR ++ D+API YLT+ K
Sbjct: 267 KGIDNWGHLGGLLGGVATSWFVGPAWQYGTQSHDGRRVFVDKAPIRYLTNRK 318


>ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|223528967|gb|EEF30959.1| KOM,
           putative [Ricinus communis]
          Length = 340

 Score =  174 bits (440), Expect = 1e-41
 Identities = 78/112 (69%), Positives = 93/112 (83%)
 Frame = +3

Query: 6   AASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALNMAIGILS 185
           A SYWFCKAPAVGASGAIFG+VGS AVFV+RHR +  GG E+LQ +A+VI LNM IGILS
Sbjct: 225 ATSYWFCKAPAVGASGAIFGLVGSLAVFVIRHRGMIRGGKEELQHIAQVILLNMVIGILS 284

Query: 186 KGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWK 341
           +GIDNWGH+GGLLGG ATSW +GPAW+Y++ + DGR I+ DR PI YL + K
Sbjct: 285 RGIDNWGHLGGLLGGVATSWFVGPAWKYEALANDGRRIFVDRPPIKYLANIK 336


>gb|AFK37322.1| unknown [Lotus japonicus]
          Length = 220

 Score =  171 bits (434), Expect = 5e-41
 Identities = 79/114 (69%), Positives = 93/114 (81%)
 Frame = +3

Query: 6   AASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALNMAIGILS 185
           A SYWFCK PAVGASGAIFG+VGS AVFVLRHR + GGG EDLQ +ARVI LNM IGILS
Sbjct: 102 AMSYWFCKMPAVGASGAIFGLVGSVAVFVLRHRDIVGGGKEDLQHIARVIVLNMVIGILS 161

Query: 186 KGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWKKL 347
           +GIDNWGH+GGLLGG A SWL+GPAW+++S S DGR I+ D AP+  L   +++
Sbjct: 162 RGIDNWGHLGGLLGGVAASWLIGPAWKHESTSWDGRRIFTDSAPMYTLLKIRRV 215


>ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vinifera]
           gi|298204568|emb|CBI23843.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  170 bits (430), Expect = 2e-40
 Identities = 78/113 (69%), Positives = 91/113 (80%)
 Frame = +3

Query: 6   AASYWFCKAPAVGASGAIFGVVGSFAVFVLRHRSLFGGGTEDLQQVARVIALNMAIGILS 185
           A SYW CK PAVGASGAIFG+VGS AVF++RHR L G   E LQ +ARVI LNM IG LS
Sbjct: 216 AMSYWLCKGPAVGASGAIFGLVGSVAVFMMRHRGLVGDSKESLQHIARVIVLNMVIGCLS 275

Query: 186 KGIDNWGHVGGLLGGAATSWLLGPAWRYQSKSQDGRPIYADRAPISYLTSWKK 344
           KGIDNWGH+GGLLGG  TSWLLGPAW+Y+S S DGR ++ADRAPI +L + ++
Sbjct: 276 KGIDNWGHLGGLLGGLVTSWLLGPAWKYESLSNDGRRVFADRAPIFHLVNRRR 328


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