BLASTX nr result

ID: Coptis25_contig00026843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026843
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818...    84   9e-15
ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communi...    84   9e-15
emb|CBI22898.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248...    84   2e-14
ref|XP_003594776.1| Bromodomain and WD repeat-containing protein...    82   3e-14

>ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818665 [Glycine max]
          Length = 1773

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/81 (50%), Positives = 49/81 (60%)
 Frame = -1

Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64
           RGH GAVTAIAF             SDDGTCRIWD R+  ++PR+YVP+P + V      
Sbjct: 321 RGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSNG 380

Query: 63  XXXXXXPQNHQILCCAYNANG 1
                 PQ+HQI CCA+NANG
Sbjct: 381 PSSSTVPQSHQIFCCAFNANG 401


>ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communis]
           gi|223541521|gb|EEF43070.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1519

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/81 (49%), Positives = 50/81 (61%)
 Frame = -1

Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64
           RGH GAVTAIAF             SDDGTCRIWD R+++ +PR+Y+P+PL+ +      
Sbjct: 333 RGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRLYIPRPLDSLAGKNSG 392

Query: 63  XXXXXXPQNHQILCCAYNANG 1
                 PQ HQI CCA+NANG
Sbjct: 393 ASSSSGPQTHQIFCCAFNANG 413


>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
          Length = 1569

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/81 (50%), Positives = 49/81 (60%)
 Frame = -1

Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64
           RGH GAVTAIAF             SDDGTCRIWD R++  +PRIYVP+P + +      
Sbjct: 324 RGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWDARYSQFSPRIYVPRPPDSIAGKNNV 383

Query: 63  XXXXXXPQNHQILCCAYNANG 1
                 PQ+HQI CCA+NANG
Sbjct: 384 PSSSNGPQSHQIFCCAFNANG 404


>ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248159 [Vitis vinifera]
          Length = 1756

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/81 (50%), Positives = 49/81 (60%)
 Frame = -1

Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64
           RGH GAVTAIAF             SDDGTCRIWD R++  +PRIYVP+P + +      
Sbjct: 324 RGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWDARYSQFSPRIYVPRPPDSIAGKNNV 383

Query: 63  XXXXXXPQNHQILCCAYNANG 1
                 PQ+HQI CCA+NANG
Sbjct: 384 PSSSNGPQSHQIFCCAFNANG 404


>ref|XP_003594776.1| Bromodomain and WD repeat-containing protein [Medicago truncatula]
           gi|355483824|gb|AES65027.1| Bromodomain and WD
           repeat-containing protein [Medicago truncatula]
          Length = 1844

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/81 (51%), Positives = 48/81 (59%)
 Frame = -1

Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64
           RGH GAVTAIAF             SDDGTCRIWD R+ H+ PR+YVPKP +        
Sbjct: 352 RGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDST-GRSSG 410

Query: 63  XXXXXXPQNHQILCCAYNANG 1
                 PQ+HQI CCA+NANG
Sbjct: 411 PSSNTMPQSHQIFCCAFNANG 431


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