BLASTX nr result
ID: Coptis25_contig00026843
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00026843 (243 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818... 84 9e-15 ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communi... 84 9e-15 emb|CBI22898.3| unnamed protein product [Vitis vinifera] 84 2e-14 ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248... 84 2e-14 ref|XP_003594776.1| Bromodomain and WD repeat-containing protein... 82 3e-14 >ref|XP_003547364.1| PREDICTED: uncharacterized protein LOC100818665 [Glycine max] Length = 1773 Score = 84.3 bits (207), Expect = 9e-15 Identities = 41/81 (50%), Positives = 49/81 (60%) Frame = -1 Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64 RGH GAVTAIAF SDDGTCRIWD R+ ++PR+YVP+P + V Sbjct: 321 RGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSNG 380 Query: 63 XXXXXXPQNHQILCCAYNANG 1 PQ+HQI CCA+NANG Sbjct: 381 PSSSTVPQSHQIFCCAFNANG 401 >ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communis] gi|223541521|gb|EEF43070.1| WD-repeat protein, putative [Ricinus communis] Length = 1519 Score = 84.3 bits (207), Expect = 9e-15 Identities = 40/81 (49%), Positives = 50/81 (61%) Frame = -1 Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64 RGH GAVTAIAF SDDGTCRIWD R+++ +PR+Y+P+PL+ + Sbjct: 333 RGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSPRLYIPRPLDSLAGKNSG 392 Query: 63 XXXXXXPQNHQILCCAYNANG 1 PQ HQI CCA+NANG Sbjct: 393 ASSSSGPQTHQIFCCAFNANG 413 >emb|CBI22898.3| unnamed protein product [Vitis vinifera] Length = 1569 Score = 83.6 bits (205), Expect = 2e-14 Identities = 41/81 (50%), Positives = 49/81 (60%) Frame = -1 Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64 RGH GAVTAIAF SDDGTCRIWD R++ +PRIYVP+P + + Sbjct: 324 RGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWDARYSQFSPRIYVPRPPDSIAGKNNV 383 Query: 63 XXXXXXPQNHQILCCAYNANG 1 PQ+HQI CCA+NANG Sbjct: 384 PSSSNGPQSHQIFCCAFNANG 404 >ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248159 [Vitis vinifera] Length = 1756 Score = 83.6 bits (205), Expect = 2e-14 Identities = 41/81 (50%), Positives = 49/81 (60%) Frame = -1 Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64 RGH GAVTAIAF SDDGTCRIWD R++ +PRIYVP+P + + Sbjct: 324 RGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWDARYSQFSPRIYVPRPPDSIAGKNNV 383 Query: 63 XXXXXXPQNHQILCCAYNANG 1 PQ+HQI CCA+NANG Sbjct: 384 PSSSNGPQSHQIFCCAFNANG 404 >ref|XP_003594776.1| Bromodomain and WD repeat-containing protein [Medicago truncatula] gi|355483824|gb|AES65027.1| Bromodomain and WD repeat-containing protein [Medicago truncatula] Length = 1844 Score = 82.4 bits (202), Expect = 3e-14 Identities = 42/81 (51%), Positives = 48/81 (59%) Frame = -1 Query: 243 RGHIGAVTAIAFXXXXXXXXXXXXXSDDGTCRIWDIRHAHANPRIYVPKPLEVVXXXXXX 64 RGH GAVTAIAF SDDGTCRIWD R+ H+ PR+YVPKP + Sbjct: 352 RGHTGAVTAIAFSPRPNAVYQLLSSSDDGTCRIWDARYTHSTPRLYVPKPSDST-GRSSG 410 Query: 63 XXXXXXPQNHQILCCAYNANG 1 PQ+HQI CCA+NANG Sbjct: 411 PSSNTMPQSHQIFCCAFNANG 431