BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026806
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]   591   e-166
emb|CBI16013.3| unnamed protein product [Vitis vinifera]              591   e-166
ref|XP_002313400.1| predicted protein [Populus trichocarpa] gi|2...   581   e-163
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...   577   e-162
dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativa Japonica G...   556   e-156

>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  591 bits (1523), Expect = e-166
 Identities = 293/362 (80%), Positives = 327/362 (90%)
 Frame = -1

Query: 1469 PKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSICKCKIKID 1290
            PK+KR L+DDY++S TSRK SG +NIKLP+HG+AAG+S+EV GI+  EFL IC  KIKID
Sbjct: 1018 PKAKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYEVRGIDNKEFLCICIHKIKID 1077

Query: 1289 QGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNKWNSILQK 1110
               LLED +NAAYSKTVQQLL  KS G+KYPPALDP+ DLKLKD+ LVE Y KWNS+LQK
Sbjct: 1078 PVGLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDLKLKDMTLVETYYKWNSLLQK 1137

Query: 1109 MAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDVLKEIGCI 930
            MA+NKCH C KL+EH  L KE+ +H++EV ALRFQMSDEALQQMPDFQGRIDVL+EIGCI
Sbjct: 1138 MADNKCHECVKLEEHIKLAKELKRHKEEVNALRFQMSDEALQQMPDFQGRIDVLQEIGCI 1197

Query: 929  DSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQKNTSEPSL 750
            D+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVALMSALVFQQKNTSEPSL
Sbjct: 1198 DADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVALMSALVFQQKNTSEPSL 1257

Query: 749  TPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKGTPFADIC 570
            TPKL+ AK+RLY+TAI LG+LQ  FK+QI+PE+YA DNLKFGLVEVVYEWAKGTPFADIC
Sbjct: 1258 TPKLSQAKQRLYNTAIRLGELQAQFKLQISPEEYAQDNLKFGLVEVVYEWAKGTPFADIC 1317

Query: 569  ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVFAASLYVT 390
            ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKME ASNAIKRDIVFAASLY+T
Sbjct: 1318 ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMEAASNAIKRDIVFAASLYIT 1377

Query: 389  GV 384
            G+
Sbjct: 1378 GL 1379


>emb|CBI16013.3| unnamed protein product [Vitis vinifera]
          Length = 1082

 Score =  591 bits (1523), Expect = e-166
 Identities = 293/362 (80%), Positives = 327/362 (90%)
 Frame = -1

Query: 1469 PKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSICKCKIKID 1290
            PK+KR L+DDY++S TSRK SG +NIKLP+HG+AAG+S+EV GI+  EFL IC  KIKID
Sbjct: 721  PKAKRALEDDYYTSTTSRKASGTINIKLPYHGAAAGVSYEVRGIDNKEFLCICIHKIKID 780

Query: 1289 QGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNKWNSILQK 1110
               LLED +NAAYSKTVQQLL  KS G+KYPPALDP+ DLKLKD+ LVE Y KWNS+LQK
Sbjct: 781  PVGLLEDANNAAYSKTVQQLLELKSKGHKYPPALDPLKDLKLKDMTLVETYYKWNSLLQK 840

Query: 1109 MAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDVLKEIGCI 930
            MA+NKCH C KL+EH  L KE+ +H++EV ALRFQMSDEALQQMPDFQGRIDVL+EIGCI
Sbjct: 841  MADNKCHECVKLEEHIKLAKELKRHKEEVNALRFQMSDEALQQMPDFQGRIDVLQEIGCI 900

Query: 929  DSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQKNTSEPSL 750
            D+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVALMSALVFQQKNTSEPSL
Sbjct: 901  DADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVALMSALVFQQKNTSEPSL 960

Query: 749  TPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKGTPFADIC 570
            TPKL+ AK+RLY+TAI LG+LQ  FK+QI+PE+YA DNLKFGLVEVVYEWAKGTPFADIC
Sbjct: 961  TPKLSQAKQRLYNTAIRLGELQAQFKLQISPEEYAQDNLKFGLVEVVYEWAKGTPFADIC 1020

Query: 569  ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVFAASLYVT 390
            ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKME ASNAIKRDIVFAASLY+T
Sbjct: 1021 ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMEAASNAIKRDIVFAASLYIT 1080

Query: 389  GV 384
            G+
Sbjct: 1081 GL 1082


>ref|XP_002313400.1| predicted protein [Populus trichocarpa] gi|222849808|gb|EEE87355.1|
            predicted protein [Populus trichocarpa]
          Length = 943

 Score =  581 bits (1497), Expect = e-163
 Identities = 286/362 (79%), Positives = 324/362 (89%)
 Frame = -1

Query: 1469 PKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSICKCKIKID 1290
            PKSKR  D++YFSS+T+RKGSG + I+LP+ G AAG+++EV GIE  EFL IC  KI ID
Sbjct: 582  PKSKRSCDEEYFSSLTNRKGSGTIKIELPYQGVAAGINYEVRGIESKEFLCICNRKITID 641

Query: 1289 QGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNKWNSILQK 1110
            Q RLLEDGSNAA+SKTVQQLL  KS GNKYPPALDP+ +LKLKD+ LVEAY+KW S+LQK
Sbjct: 642  QVRLLEDGSNAAFSKTVQQLLETKSDGNKYPPALDPLKELKLKDVNLVEAYHKWTSLLQK 701

Query: 1109 MAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDVLKEIGCI 930
            MA NKCHGC KL+EH  L KEI +H++EV  L+FQMSDEALQQMPDFQGRI VLKEIGCI
Sbjct: 702  MASNKCHGCIKLEEHISLAKEIKRHKEEVSNLQFQMSDEALQQMPDFQGRIYVLKEIGCI 761

Query: 929  DSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQKNTSEPSL 750
            D DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVA+MSA VFQQ+ TSEPSL
Sbjct: 762  DGDLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRKTSEPSL 821

Query: 749  TPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKGTPFADIC 570
            TP+L+ AKKRLY TAI LG+LQ ++ +Q+NPE+YAN+NLKFGLVEVVYEWAKGTPFADIC
Sbjct: 822  TPRLSQAKKRLYSTAIRLGELQSNYNIQVNPEEYANENLKFGLVEVVYEWAKGTPFADIC 881

Query: 569  ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVFAASLYVT 390
            ELTDVPEGLIVRTIVRLDETCREF+NAAAIMGNSA++KKME+ASNAIKRDIVFAASLYVT
Sbjct: 882  ELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSAVYKKMESASNAIKRDIVFAASLYVT 941

Query: 389  GV 384
            GV
Sbjct: 942  GV 943


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
            helicase, putative [Ricinus communis]
          Length = 1335

 Score =  577 bits (1486), Expect = e-162
 Identities = 288/362 (79%), Positives = 323/362 (89%)
 Frame = -1

Query: 1469 PKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSICKCKIKID 1290
            PKSKRG +++YF S  SRKGSGAVNIKLP+ G+AAG+++EV G++  EFL IC  K+KID
Sbjct: 975  PKSKRG-EEEYFYSTASRKGSGAVNIKLPYQGTAAGVNYEVRGMDNTEFLCICARKLKID 1033

Query: 1289 QGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNKWNSILQK 1110
            Q  LLED SN A+SKTVQQL   KS GNKYPPALDP++DLK+KD+ LVEAY KW S+LQK
Sbjct: 1034 QVGLLEDVSNTAFSKTVQQLSELKSDGNKYPPALDPLTDLKMKDVNLVEAYKKWTSLLQK 1093

Query: 1109 MAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDVLKEIGCI 930
            MA NKCHGC KL+EH  L KEI KH+DE+  LRFQMSDEALQQMPDFQGRIDVLKEIGCI
Sbjct: 1094 MARNKCHGCIKLEEHLNLAKEIKKHKDEIDKLRFQMSDEALQQMPDFQGRIDVLKEIGCI 1153

Query: 929  DSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQKNTSEPSL 750
            D+DLVVQIKGRVACEMNSGEELI TECLF+NQL+DLEPEEAVA+MSA VFQQ+NTSEPSL
Sbjct: 1154 DADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSL 1213

Query: 749  TPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKGTPFADIC 570
            TPKL+ AKKRLYDTAI LG+LQ   K+QINPE+YA +NLKFGLVEVVYEWAKGTPFADIC
Sbjct: 1214 TPKLSKAKKRLYDTAIRLGELQVKNKLQINPEEYAQENLKFGLVEVVYEWAKGTPFADIC 1273

Query: 569  ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVFAASLYVT 390
            ELTDVPEGLIVRTIVRLDETCREF+NAA+IMGNS+L+KKME ASNAIKRDIVFAASLY+T
Sbjct: 1274 ELTDVPEGLIVRTIVRLDETCREFKNAASIMGNSSLYKKMEAASNAIKRDIVFAASLYIT 1333

Query: 389  GV 384
            GV
Sbjct: 1334 GV 1335


>dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativa Japonica Group]
          Length = 1281

 Score =  556 bits (1434), Expect = e-156
 Identities = 276/362 (76%), Positives = 315/362 (87%)
 Frame = -1

Query: 1469 PKSKRGLDDDYFSSVTSRKGSGAVNIKLPHHGSAAGMSFEVIGIEPVEFLSICKCKIKID 1290
            PK KR ++D+YFSSV++RKGSG +NIKLP+ G A+GM FEV  IE  E ++IC  KIKID
Sbjct: 920  PKGKRSMEDEYFSSVSTRKGSGVINIKLPYKGDASGMGFEVRAIENKEIMNICASKIKID 979

Query: 1289 QGRLLEDGSNAAYSKTVQQLLSQKSGGNKYPPALDPISDLKLKDILLVEAYNKWNSILQK 1110
            Q RLLED S   YSKTVQ L+ ++  GNKYP ALD I DLK+KD+LLVE Y  +  +LQK
Sbjct: 980  QVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAALDAIKDLKMKDMLLVENYYAYQRLLQK 1039

Query: 1109 MAENKCHGCPKLKEHTLLLKEINKHRDEVKALRFQMSDEALQQMPDFQGRIDVLKEIGCI 930
            M+ENKCHGC KLKEH  L+KE   ++D++  L+++MSDEALQQMP+FQGRIDVLKEI  I
Sbjct: 1040 MSENKCHGCIKLKEHIALMKEQKVYKDQLNDLKYEMSDEALQQMPEFQGRIDVLKEIHYI 1099

Query: 929  DSDLVVQIKGRVACEMNSGEELISTECLFDNQLEDLEPEEAVALMSALVFQQKNTSEPSL 750
            DSDLVVQ+KGRVACEMNSGEELISTECLF+NQL+DLEPEEAVA+MSALVFQQ+NTSEPSL
Sbjct: 1100 DSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSALVFQQRNTSEPSL 1159

Query: 749  TPKLAHAKKRLYDTAIGLGKLQEHFKVQINPEDYANDNLKFGLVEVVYEWAKGTPFADIC 570
            TPKLA A+KR+YDTAI LGKLQ  FKV ++PE+YA DNLKFGLVEVVYEWAKGTPFADIC
Sbjct: 1160 TPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKGTPFADIC 1219

Query: 569  ELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALHKKMETASNAIKRDIVFAASLYVT 390
            ELTDV EGLIVRTIVRLDETCREFRNAA+IMGNSALHKKMETASNAIKRDIVFAASLYVT
Sbjct: 1220 ELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALHKKMETASNAIKRDIVFAASLYVT 1279

Query: 389  GV 384
            G+
Sbjct: 1280 GI 1281