BLASTX nr result

ID: Coptis25_contig00026793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026793
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36841.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...    69   3e-10
ref|XP_003591546.1| ABC transporter C family protein [Medicago t...    68   9e-10
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...    67   2e-09
ref|XP_002321011.1| multidrug resistance protein ABC transporter...    64   2e-08

>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +3

Query: 3    CDRVLVIDSGRAIEFDKPSSLLERHSLFAALVREFANSSLGL 128
            CDRVLVID+GRA EFDKPS LLERHSLF ALV+E+AN S G+
Sbjct: 1038 CDRVLVIDAGRAKEFDKPSRLLERHSLFGALVQEYANRSAGM 1079


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +3

Query: 3    CDRVLVIDSGRAIEFDKPSSLLERHSLFAALVREFANSSLGL 128
            CDRVLVID+GRA EFDKPS LLERHSLF ALV+E+AN S G+
Sbjct: 1468 CDRVLVIDAGRAKEFDKPSRLLERHSLFGALVQEYANRSAGM 1509


>ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula]
            gi|355480594|gb|AES61797.1| ABC transporter C family
            protein [Medicago truncatula]
          Length = 1515

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +3

Query: 3    CDRVLVIDSGRAIEFDKPSSLLERHSLFAALVREFANSSLGL 128
            CDRVLV+D+GRA EFDKPS+LL+R SLFAALV+E+AN S GL
Sbjct: 1474 CDRVLVVDAGRAKEFDKPSNLLQRQSLFAALVQEYANRSTGL 1515


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +3

Query: 3    CDRVLVIDSGRAIEFDKPSSLLERHSLFAALVREFANSSLGL 128
            CDRVLVID+G+A EFDKPS LLER SLFAALV+E+AN S GL
Sbjct: 1465 CDRVLVIDAGKAKEFDKPSRLLERPSLFAALVQEYANRSAGL 1506


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1507

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +3

Query: 3    CDRVLVIDSGRAIEFDKPSSLLERHSLFAALVREFANSSLGL 128
            CDRVLVID+GR+ EFDKPS LLER SLF ALVRE+AN S  L
Sbjct: 1466 CDRVLVIDAGRSKEFDKPSRLLERPSLFGALVREYANRSAEL 1507


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