BLASTX nr result

ID: Coptis25_contig00026787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026787
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196825.1| uncharacterized protein [Arabidopsis thaliana] ...   120   2e-25
ref|NP_199153.1| uncharacterized protein [Arabidopsis thaliana] ...   118   6e-25
ref|XP_002863658.1| hypothetical protein ARALYDRAFT_917317 [Arab...   117   1e-24
ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   116   2e-24
ref|XP_004144675.1| PREDICTED: uncharacterized protein L728-like...   116   2e-24

>ref|NP_196825.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7529276|emb|CAB86628.1| putative protein [Arabidopsis
           thaliana] gi|18086395|gb|AAL57656.1| AT5g13210/T31B5_30
           [Arabidopsis thaliana] gi|332004481|gb|AED91864.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 673

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/76 (72%), Positives = 65/76 (85%)
 Frame = +3

Query: 12  DGGRVAELQWKRMVDDLSEKGKLHNYIAVCDVFGSMSGEPMEVCVALGLLLSELSEHPWN 191
           DGG+VAELQWKR VDD+ EKG L N IAVCDV GSM+GEPMEVCVALGLL+SELSE PW 
Sbjct: 429 DGGQVAELQWKRTVDDMKEKGSLRNCIAVCDVSGSMNGEPMEVCVALGLLVSELSEEPWK 488

Query: 192 GQVITFSENPTFLIIE 239
           G++ITFS+NP   +++
Sbjct: 489 GKLITFSQNPELHLVK 504


>ref|NP_199153.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8843893|dbj|BAA97419.1| unnamed protein product
           [Arabidopsis thaliana] gi|18450363|gb|AAK82505.2|
           AT5g43400/MWF20_9 [Arabidopsis thaliana]
           gi|25090369|gb|AAN72286.1| At5g43400/MWF20_9
           [Arabidopsis thaliana] gi|332007573|gb|AED94956.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 655

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/78 (73%), Positives = 63/78 (80%)
 Frame = +3

Query: 3   GENDGGRVAELQWKRMVDDLSEKGKLHNYIAVCDVFGSMSGEPMEVCVALGLLLSELSEH 182
           G   G  VAELQW RMVDDL++KGKL N +AVCDV GSMSG PMEVCVALGLL+SELSE 
Sbjct: 405 GSEVGAEVAELQWARMVDDLAKKGKLKNSLAVCDVSGSMSGTPMEVCVALGLLVSELSEE 464

Query: 183 PWNGQVITFSENPTFLII 236
           PW G+VITFSENP   I+
Sbjct: 465 PWKGKVITFSENPELHIV 482


>ref|XP_002863658.1| hypothetical protein ARALYDRAFT_917317 [Arabidopsis lyrata subsp.
           lyrata] gi|297309493|gb|EFH39917.1| hypothetical protein
           ARALYDRAFT_917317 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/78 (71%), Positives = 63/78 (80%)
 Frame = +3

Query: 3   GENDGGRVAELQWKRMVDDLSEKGKLHNYIAVCDVFGSMSGEPMEVCVALGLLLSELSEH 182
           G   G  VAELQW RMVDDL++KGKL N +AVCDV GSMSG PMEVCVALGLL+SEL+E 
Sbjct: 407 GSEVGAEVAELQWARMVDDLAKKGKLKNSLAVCDVSGSMSGTPMEVCVALGLLVSELNEE 466

Query: 183 PWNGQVITFSENPTFLII 236
           PW G+VITFSENP   I+
Sbjct: 467 PWKGKVITFSENPQLHIV 484


>ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein L728-like
           [Cucumis sativus]
          Length = 638

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/79 (70%), Positives = 63/79 (79%)
 Frame = +3

Query: 3   GENDGGRVAELQWKRMVDDLSEKGKLHNYIAVCDVFGSMSGEPMEVCVALGLLLSELSEH 182
           G+ DGG VAELQWKRMVDDL +KGKL   IAVCDV GSM G PM+VCV LGLL+SELSE 
Sbjct: 411 GQEDGGEVAELQWKRMVDDLLKKGKLRECIAVCDVSGSMMGIPMDVCVGLGLLVSELSED 470

Query: 183 PWNGQVITFSENPTFLIIE 239
           PW G+VITFS NP   +I+
Sbjct: 471 PWKGKVITFSANPELHMIQ 489


>ref|XP_004144675.1| PREDICTED: uncharacterized protein L728-like [Cucumis sativus]
          Length = 638

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/79 (70%), Positives = 63/79 (79%)
 Frame = +3

Query: 3   GENDGGRVAELQWKRMVDDLSEKGKLHNYIAVCDVFGSMSGEPMEVCVALGLLLSELSEH 182
           G+ DGG VAELQWKRMVDDL +KGKL   IAVCDV GSM G PM+VCV LGLL+SELSE 
Sbjct: 411 GQEDGGEVAELQWKRMVDDLLKKGKLRECIAVCDVSGSMMGIPMDVCVGLGLLVSELSED 470

Query: 183 PWNGQVITFSENPTFLIIE 239
           PW G+VITFS NP   +I+
Sbjct: 471 PWKGKVITFSANPELHMIQ 489


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