BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026748
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   131   5e-29
ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244...   123   2e-26
ref|XP_002305249.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   115   4e-24
ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820...   110   9e-23

>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  131 bits (330), Expect = 5e-29
 Identities = 77/163 (47%), Positives = 99/163 (60%), Gaps = 11/163 (6%)
 Frame = -2

Query: 458 VDDLNRPPRCYVSGLVVRGVDDDSPNMLQILTSKPISFKE-----RKENGETLFATFLIN 294
           V+DLNRP R Y    V      +S   + IL+SK I  +      R  N   L+A +L+N
Sbjct: 135 VEDLNRPRRYYHIAYVYGS--KESSGEISILSSKCIDMEVDSNYLRSNNAPKLYAVYLLN 192

Query: 293 ITTNNRIWRALQGENEH---NMIKEVLNADSKVGERCDVCSFQEIHV---LRQDLNIKFR 132
           +TTN RIW+AL  E E    NMIK+VL ADS  GE C +C + E H+       ++   +
Sbjct: 193 LTTNIRIWKALNSELEGAKMNMIKKVLQADSNNGENCQLCIYGENHIDIAACSKVHTMIQ 252

Query: 131 SMNLNESQMDAVLSSIETRQCKHRNSIRLIWGPSGTGKTKTVA 3
           S NLNESQ DAVLSS+  R+C H ++I+LIWGP GTGKTKTVA
Sbjct: 253 SENLNESQKDAVLSSVSMRECHHSDTIKLIWGPPGTGKTKTVA 295


>ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
          Length = 1076

 Score =  123 bits (308), Expect = 2e-26
 Identities = 75/165 (45%), Positives = 98/165 (59%), Gaps = 12/165 (7%)
 Frame = -2

Query: 461 CVDDLNRPPRCY-VSGLVVRGV-DDDSP----NMLQILTSKPISFKERKENGE---TLFA 309
           C+ DLNRP   Y V+ +V + V D D P    +   +L+SKPI F++  E  +   TLFA
Sbjct: 158 CISDLNRPKISYTVASVVAKPVRDPDEPPPEEDTCIVLSSKPIEFEQNMETNKKRKTLFA 217

Query: 308 TFLINITTNNRIWRALQ---GENEHNMIKEVLNADSKVGERCDVCSFQEIHVLRQDLNIK 138
            FLIN+ TNNRIW AL         ++I++VL  DS  GE C +CS   +     +    
Sbjct: 218 VFLINMITNNRIWAALNIGPDLGNKSIIQKVLQPDSLAGEECALCSSDSV----SNSEPM 273

Query: 137 FRSMNLNESQMDAVLSSIETRQCKHRNSIRLIWGPSGTGKTKTVA 3
             S +LN+SQ  AVLS I  R+C H+NSI+ IWGP GTGKTKTVA
Sbjct: 274 VSSFDLNDSQKAAVLSCIAARECHHQNSIKQIWGPPGTGKTKTVA 318


>ref|XP_002305249.1| predicted protein [Populus trichocarpa] gi|222848213|gb|EEE85760.1|
           predicted protein [Populus trichocarpa]
          Length = 1101

 Score =  117 bits (294), Expect = 7e-25
 Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 7/159 (4%)
 Frame = -2

Query: 461 CVDDLNRPPRCYVSGLVVRG--VDDDSPNMLQILTSKPISFKERKENGE--TLFATFLIN 294
           C+ DL+     Y   LV R    + +  + +QIL+SKPI  ++ +++ +  T F+ FL N
Sbjct: 124 CIGDLSWFNESYKIALVQRKKRFEHEDYDEIQILSSKPIKEQDMQQHTKQKTRFSVFLTN 183

Query: 293 ITTNNRIWRALQ--GENEHNMIKEVLNADSKVGERCDVCSFQEIH-VLRQDLNIKFRSMN 123
           + TN RIW+AL   GE   N+I++VL  DS V + C  C  +E H V    L    RS +
Sbjct: 184 MKTNVRIWKALSLLGEGNMNIIQQVLQTDSSVVDNCANCFIREKHNVDASTLGAYIRSFD 243

Query: 122 LNESQMDAVLSSIETRQCKHRNSIRLIWGPSGTGKTKTV 6
           LN SQ +AVLS I  R+C HRNS++LIWGP GTGKTKT+
Sbjct: 244 LNASQEEAVLSCICARECHHRNSVKLIWGPPGTGKTKTI 282


>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 925

 Score =  115 bits (288), Expect = 4e-24
 Identities = 75/162 (46%), Positives = 101/162 (62%), Gaps = 10/162 (6%)
 Frame = -2

Query: 458 VDDL-NRPPRCYVSGLVVRGVDDDSPNMLQILTSKP----ISFKER-KENGETLFATFLI 297
           VDDL NRP R Y  G V  G+ + S + + IL+SK     I F  R K +   L+A  L+
Sbjct: 134 VDDLINRPKRNYHIGYV-HGIKE-SIDKISILSSKSFDMDIQFALRSKSDAPKLYAFHLL 191

Query: 296 NITTNNRIWRALQGENEH---NMIKEVLNADSKVGERCDVCSFQEIH-VLRQDLNIKFRS 129
           N+TTN RIW+AL+ + E    +M+K+VL AD   GE C +C   E H V    +    RS
Sbjct: 192 NLTTNVRIWKALKSQLEGASLSMMKKVLQADINNGENCQLCFSGENHSVACSSVQNIIRS 251

Query: 128 MNLNESQMDAVLSSIETRQCKHRNSIRLIWGPSGTGKTKTVA 3
            NLN+SQ +AV+S + +R+C H ++I+LIWGP GTGKTKTVA
Sbjct: 252 QNLNQSQKEAVVSCVTSRECHHNDTIKLIWGPPGTGKTKTVA 293


>ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820164 [Glycine max]
          Length = 1054

 Score =  110 bits (276), Expect = 9e-23
 Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
 Frame = -2

Query: 461 CVDDLNRPPRCYVSGL---VVRGVDDDSPNMLQILTSKPISFKERKENGETL------FA 309
           C+DDLN+    Y+  L   V +  DD++   +QIL S+PI  +   +  +        FA
Sbjct: 115 CIDDLNKHGNSYLIALIRKVRKKNDDENVFEVQILASQPIKLEMYWQEDDKYIYGIYGFA 174

Query: 308 TFLINITTNNRIWRALQGENEHNMI---KEVLNADSKVGERCDVC-SFQEIHVLRQDLNI 141
            +L ++TTN RIW AL  + +  +I   K++L  DS VGE C  C SFQ        +  
Sbjct: 175 VYLFSLTTNMRIWNALNSDPDGPVIHVSKQLLQPDSAVGENCAQCYSFQRYTDDGSMIGA 234

Query: 140 KFRSMNLNESQMDAVLSSIETRQCKHRNSIRLIWGPSGTGKTKTVA 3
             R  +LN++Q + VLS +  R+C H+N+++LIWGP GTGKTKTVA
Sbjct: 235 AIRLFDLNKAQEEGVLSCLAARECSHKNTVKLIWGPPGTGKTKTVA 280