BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026744
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17752.3| unnamed protein product [Vitis vinifera]              532   e-175
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   519   e-162
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   498   e-157
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   485   e-155
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   443   e-149

>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  532 bits (1371), Expect(2) = e-175
 Identities = 255/340 (75%), Positives = 291/340 (85%)
 Frame = -2

Query: 1287 GKQKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGR 1108
            GKQKG++H+FASYNAFAYCLNR+N FRAADQVPELMNMQGKPP+EKQFEILIRMH DA R
Sbjct: 143  GKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANR 202

Query: 1107 GLRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMI 928
            GLRVYYVYEKMKKFGIKPRVFLYNR+MD LVKT HLDLA++VYEDFKEDGLVEESVT+MI
Sbjct: 203  GLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMI 262

Query: 927  LIKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDG 748
            L+KGLC+ GRIDE  ELL RMR NLCKPDVF YTAM++VL+A+GNLDGCL VWEE+ KD 
Sbjct: 263  LVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDK 322

Query: 747  VDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSAC 568
            V+PD MAYTT++ ALC GN   +G E+F+EMK+KKYLIDRA+YGSLIE FV   ++GSAC
Sbjct: 323  VEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSAC 382

Query: 567  DLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTVNPILALY 388
            DLLK LM SGYRADL+I NSLIEG+CN  ++ KAYKLFQ TV E L P+F+TV P+L  Y
Sbjct: 383  DLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSY 442

Query: 387  AEQSRMDEICKLLEQMRKLGLHVIDDLSNFFSFMVGKGGR 268
            AE  RMD+ C LL QM+KLG  VIDDLS FFS M+ KG R
Sbjct: 443  AEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGER 482



 Score =  112 bits (280), Expect(2) = e-175
 Identities = 47/85 (55%), Positives = 72/85 (84%)
 Frame = -1

Query: 256 ETLKYLKARGFCNVSIYSIIIQALHKIGDVKGALSLFEEMKDSEYIPDSSTYSNVIPCFV 77
           E  ++LKA+G+C++SIY+I+++A+H+ G+VK ALSLF+++KDS + PDSSTYSN I CFV
Sbjct: 488 EVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFV 547

Query: 76  DVGDVKAACSCYNKMKEKSWVPTIS 2
           +VGDV+ AC+CYNK+ E   +P+++
Sbjct: 548 EVGDVQEACACYNKIIEMCQLPSVA 572



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 1/223 (0%)
 Frame = -2

Query: 1146 FEILIRMHSDAGRGLRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFK 967
            + IL+      G   +   +++ +K    KP    Y+  +   V+   +  A A Y    
Sbjct: 504  YNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKII 563

Query: 966  EDGLVEESVTFMILIKGLCREGRIDEAFELLGRMRENLCK-PDVFTYTAMIRVLIAKGNL 790
            E   +     +  L+KGLC+   ID A  L+     N+   P  F YT  I      GN 
Sbjct: 564  EMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNA 623

Query: 789  DGCLTVWEEILKDGVDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSL 610
            +  + V  E++++G  PD + Y+ +I+ +CK    E+  +VF  M+++K L +  V    
Sbjct: 624  EKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKLLTEANVI-VY 682

Query: 609  IEAFVAEGKIGSACDLLKALMSSGYRADLSILNSLIEGLCNAN 481
             E  +   K  +A  +L  L   G  + L    S +  + N+N
Sbjct: 683  DEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLPIENSN 725



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
 Frame = -2

Query: 1065 GIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMILIKGLCREGRIDEA 886
            G +  + +YN +++ +     +D A  +++    + L    +T   ++       R+D+ 
Sbjct: 392  GYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDF 451

Query: 885  FELLGRMRENLCKPDVFTYTAMIRVLIAKGN-LDGCLTVWEEILKDGVDPDAMAYTTVIT 709
              LLG+M++ L  P +   +    V+I KG  L   L V+E +   G    ++ Y  ++ 
Sbjct: 452  CSLLGQMQK-LGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGYCSISI-YNILME 509

Query: 708  ALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSACDLLKALMSSGYRA 529
            A+ +    +K   +F+++K   +  D + Y + I  FV  G +  AC     ++      
Sbjct: 510  AIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLP 569

Query: 528  DLSILNSLIEGLCNANKIGKAYKL--------------FQFT------------------ 445
             ++   SL++GLC + +I  A  L              F++T                  
Sbjct: 570  SVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDV 629

Query: 444  ----VQEGLSPDFVTVNPILALYAEQSRMDEICKLLEQMRK 334
                +QEG +PD VT + +++   +   ++E  K+   MR+
Sbjct: 630  LNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRE 670


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
            predicted protein [Populus trichocarpa]
          Length = 728

 Score =  519 bits (1337), Expect(2) = e-162
 Identities = 248/340 (72%), Positives = 287/340 (84%)
 Frame = -2

Query: 1287 GKQKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGR 1108
            GKQKGF+H FASYNAFAY LNR+N+FRAADQ+PELM  QGKPPTEKQFEILIRMHSDA R
Sbjct: 151  GKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEKQFEILIRMHSDANR 210

Query: 1107 GLRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMI 928
            GLRVYYVY+KM KFG+KPRVFLYNR+MD+L+KT HLDLAL+VYEDF+ DGLVEESVT+MI
Sbjct: 211  GLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMI 270

Query: 927  LIKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDG 748
            LIKGLC+ GRI+E  E+LGRMRENLCKPDVF YTAM+R L  +GNLD CL VWEE+ +DG
Sbjct: 271  LIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEGNLDACLRVWEEMKRDG 330

Query: 747  VDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSAC 568
            V+PD MAY T++TALCKG   +KG EVF+EMK ++ LIDR +YG L+EAFVA+GKIG AC
Sbjct: 331  VEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGIYGILVEAFVADGKIGLAC 390

Query: 567  DLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTVNPILALY 388
            DLLK L+ SGYRADL I NSLIEG CN  ++ KA+KLFQ TVQEGL  DF TVNP+L  Y
Sbjct: 391  DLLKDLVDSGYRADLRIYNSLIEGFCNVKRVDKAHKLFQVTVQEGLERDFKTVNPLLMSY 450

Query: 387  AEQSRMDEICKLLEQMRKLGLHVIDDLSNFFSFMVGKGGR 268
            AE  +MD+ CKLL+QM KLG  V DDLS FFS++VGK  R
Sbjct: 451  AEMKKMDDFCKLLKQMEKLGFSVFDDLSKFFSYVVGKPER 490



 Score = 80.1 bits (196), Expect(2) = e-162
 Identities = 42/95 (44%), Positives = 65/95 (68%)
 Frame = -1

Query: 286 GR*RREVLQGETLKYLKARGFCNVSIYSIIIQALHKIGDVKGALSLFEEMKDSEYIPDSS 107
           G+  R ++  E  + LK +G+ +V IY+I+++AL  IG++K ALSLF EMKD    PDS+
Sbjct: 486 GKPERTMMALEVFEDLKVKGYSSVPIYNILMEALLTIGEMKRALSLFGEMKDLNK-PDST 544

Query: 106 TYSNVIPCFVDVGDVKAACSCYNKMKEKSWVPTIS 2
           TYS  I CFV+ G+++ AC  +NK+ E   VP+++
Sbjct: 545 TYSIAIICFVEDGNIQEACVSHNKIVEMFCVPSVA 579



 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 6/280 (2%)
 Frame = -2

Query: 1275 GFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGRGLRV 1096
            G+R D   YN+             A ++ ++   +G     K    L+  +++  +    
Sbjct: 400  GYRADLRIYNSLIEGFCNVKRVDKAHKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDF 459

Query: 1095 YYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMILIKG 916
              + ++M+K G      L       + K +   +AL V+ED K  G     + + IL++ 
Sbjct: 460  CKLLKQMEKLGFSVFDDLSKFFSYVVGKPERTMMALEVFEDLKVKGYSSVPI-YNILMEA 518

Query: 915  LCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDGVDPD 736
            L   G +  A  L G M++ L KPD  TY+  I   +  GN+        +I++    P 
Sbjct: 519  LLTIGEMKRALSLFGEMKD-LNKPDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPS 577

Query: 735  AMAYTTVITALCKGNVAE------KGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGS 574
              AY ++   LC     +      + C    E    ++      Y   I      G    
Sbjct: 578  VAAYCSLAKGLCDNGEIDAAMMLVRDCLASVESGPMEF-----KYSLTILHACKTGGAEK 632

Query: 573  ACDLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLF 454
              D+L  +M  G   +  I +++I G+C      +A K+F
Sbjct: 633  VIDVLNEMMQEGCTPNEVIYSAIISGMCKHGTFEEARKVF 672


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355487951|gb|AES69154.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  498 bits (1283), Expect(2) = e-157
 Identities = 240/339 (70%), Positives = 286/339 (84%), Gaps = 1/339 (0%)
 Frame = -2

Query: 1284 KQKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGRG 1105
            KQKG+ H+FASYNAF YCLNR N+FRAADQ+PELM+ QGKPP+EKQFEILIRMHSDAGRG
Sbjct: 146  KQKGYHHNFASYNAFTYCLNRANHFRAADQLPELMDAQGKPPSEKQFEILIRMHSDAGRG 205

Query: 1104 LRVYYVYEKMK-KFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMI 928
            LRVY+VY+KM+ KFG+KPRVFLYNR+MDALVKT HLDLAL+VY DF+EDGLVEESVTFMI
Sbjct: 206  LRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMI 265

Query: 927  LIKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDG 748
            LIKGLC+ G+IDE  E+LGRMRE LCKPDVF YTA++R+++ +GNLDGCL VW+E+ +D 
Sbjct: 266  LIKGLCKGGKIDEMLEVLGRMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDR 325

Query: 747  VDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSAC 568
            VDPD MAY T+I  L KG    +G E+F+EMK K +LIDRA+YGSL+E+FVA  K+G A 
Sbjct: 326  VDPDVMAYGTIIGGLAKGGRVSEGYELFKEMKSKGHLIDRAIYGSLVESFVAGNKVGLAF 385

Query: 567  DLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTVNPILALY 388
            DLLK L+SSGYRADL + N+LIEGLCN NK+ KAYKLFQ T+QEGL PDF++V P+L  Y
Sbjct: 386  DLLKDLVSSGYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAY 445

Query: 387  AEQSRMDEICKLLEQMRKLGLHVIDDLSNFFSFMVGKGG 271
            AE  RM+E   LLE+M+KLG  VIDDLS FFS +V K G
Sbjct: 446  AEAKRMEEFFMLLEKMKKLGFPVIDDLSKFFSHLVEKKG 484



 Score = 84.7 bits (208), Expect(2) = e-157
 Identities = 39/85 (45%), Positives = 59/85 (69%)
 Frame = -1

Query: 256 ETLKYLKARGFCNVSIYSIIIQALHKIGDVKGALSLFEEMKDSEYIPDSSTYSNVIPCFV 77
           E   +LK + + +V IY+I +++LH  G V+ ALSLF+E+K S+  PDSSTY+  I C V
Sbjct: 490 EIFTHLKEKSYVSVEIYNIFMESLHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLV 549

Query: 76  DVGDVKAACSCYNKMKEKSWVPTIS 2
           D G +K AC C+NK+ E S +P+++
Sbjct: 550 DHGQIKEACECHNKIIEMSSIPSVA 574



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 8/297 (2%)
 Frame = -2

Query: 1275 GFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGRGLRV 1096
            G+R D   YN     L   N    A ++ ++   +G  P     + L+  +++A R    
Sbjct: 395  GYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEF 454

Query: 1095 YYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMILIKG 916
            + + EKMKK G  P +   ++    LV+    ++AL ++   KE   V   + + I ++ 
Sbjct: 455  FMLLEKMKKLGF-PVIDDLSKFFSHLVEKKGPEMALEIFTHLKEKSYVSVEI-YNIFMES 512

Query: 915  LCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDGVDPD 736
            L   G++++A  L   ++ +  +PD  TY   I  L+  G +        +I++    P 
Sbjct: 513  LHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKEACECHNKIIEMSSIPS 572

Query: 735  AMAYTTVITALCK-GNVAE-----KGC--EVFEEMKKKKYLIDRAVYGSLIEAFVAEGKI 580
              AY  +   LC  G + E     + C   V     + KY +       + ++ VAE  I
Sbjct: 573  VAAYNCLAKGLCNIGEIDEAMLLVRDCLGNVTSGPMEFKYCLTII---RMCKSNVAEKLI 629

Query: 579  GSACDLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTV 409
                D+L  +M  G   D  + +++I G+C    I +A K+F    +  L  +  T+
Sbjct: 630  ----DVLNEMMQEGCSLDNVVCSAIISGMCKYGTIEEARKVFSILRERKLLTESDTI 682


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Glycine max]
          Length = 733

 Score =  485 bits (1248), Expect(2) = e-155
 Identities = 236/340 (69%), Positives = 279/340 (82%), Gaps = 1/340 (0%)
 Frame = -2

Query: 1287 GKQKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGR 1108
            G Q+G+ H+FASYNA AYCLNR + FRAADQ+PELM  QGKPP+EKQFEILIRMHSDA R
Sbjct: 155  GSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQFEILIRMHSDANR 214

Query: 1107 GLRVYYVYEKMK-KFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFM 931
            GLRVY+VYEKM+ KFG+KPRVFLYNRVMDALV+T HLDLAL+VY+D KEDGLVEESVTFM
Sbjct: 215  GLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFM 274

Query: 930  ILIKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKD 751
            +L+KGLC+ GRIDE  E+LGRMRE LCKPDVF YTA++++L+  GNLD CL VWEE+ +D
Sbjct: 275  VLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRD 334

Query: 750  GVDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSA 571
             V+PD  AY T+I  L KG   ++G E+F EMK K  L+DR +YG+L+EAFVAEGK+  A
Sbjct: 335  RVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELA 394

Query: 570  CDLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTVNPILAL 391
             DLLK L+SSGYRADL I   LIEGLCN N++ KAYKLFQ TV+EGL PDF+TV P+L  
Sbjct: 395  FDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVA 454

Query: 390  YAEQSRMDEICKLLEQMRKLGLHVIDDLSNFFSFMVGKGG 271
            YAE +RM+E CKLLEQM+KLG  VI DLS FFS +V K G
Sbjct: 455  YAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSVLVEKKG 494



 Score = 91.7 bits (226), Expect(2) = e-155
 Identities = 42/85 (49%), Positives = 60/85 (70%)
 Frame = -1

Query: 256 ETLKYLKARGFCNVSIYSIIIQALHKIGDVKGALSLFEEMKDSEYIPDSSTYSNVIPCFV 77
           ET   LK +G  +V IY+I + +LHKIG+VK ALSLF+EMK     PDS TY   I C V
Sbjct: 500 ETFGQLKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLV 559

Query: 76  DVGDVKAACSCYNKMKEKSWVPTIS 2
           D+G++K AC+C+N++ E S +P+++
Sbjct: 560 DLGEIKEACACHNRIIEMSCIPSVA 584



 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 76/331 (22%), Positives = 131/331 (39%), Gaps = 33/331 (9%)
 Frame = -2

Query: 1251 YNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGRGLRVYYVYEKMK 1072
            YN     L RT +   A  V + +   G       F +L++     GR   +  V  +M+
Sbjct: 238  YNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMR 297

Query: 1071 KFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMILIKGLCREGRID 892
            +   KP VF Y  ++  LV   +LD  L V+E+ K D +  +   +  +I GL + GR+ 
Sbjct: 298  ERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQ 357

Query: 891  EAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDGVDPDAMAYTTVI 712
            E +EL   M+   C  D   Y A++   +A+G ++    + ++++  G   D   Y  +I
Sbjct: 358  EGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLI 417

Query: 711  TALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSACDLLKALMSSGYR 532
              LC  N  +K  ++F+   ++    D      L+ A+    ++   C LL+ +   G+ 
Sbjct: 418  EGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGFP 477

Query: 531  --ADLS-------------------------------ILNSLIEGLCNANKIGKAYKLFQ 451
              ADLS                               I N  ++ L    ++ KA  LF 
Sbjct: 478  VIADLSKFFSVLVEKKGPIMALETFGQLKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFD 537

Query: 450  FTVQEGLSPDFVTVNPILALYAEQSRMDEIC 358
                  L PD  T    +    +   + E C
Sbjct: 538  EMKGLSLKPDSFTYCTAILCLVDLGEIKEAC 568



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 4/241 (1%)
 Frame = -2

Query: 1281 QKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKP---PTEKQFEILIRMHSDAG 1111
            ++G   DF +           N      ++ E M   G P      K F +L+       
Sbjct: 438  REGLEPDFLTVKPLLVAYAEANRMEEFCKLLEQMQKLGFPVIADLSKFFSVLVEKKGP-- 495

Query: 1110 RGLRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFM 931
              +     + ++K+ G    V +YN  MD+L K   +  AL+++++ K   L  +S T+ 
Sbjct: 496  --IMALETFGQLKEKG-HVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYC 552

Query: 930  ILIKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKD 751
              I  L   G I EA     R+ E  C P V  Y+++ + L   G +D  + +  + L +
Sbjct: 553  TAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVRDCLGN 612

Query: 750  GVD-PDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGS 574
              D P    Y+  I   CK NVAEK  +V  EM ++   +D  +Y S+I      G I  
Sbjct: 613  VSDGPLEFKYSLTIIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEE 672

Query: 573  A 571
            A
Sbjct: 673  A 673



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 68/289 (23%), Positives = 115/289 (39%), Gaps = 15/289 (5%)
 Frame = -2

Query: 1275 GFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGRGLRV 1096
            G+R D   Y      L   N  + A ++ +L   +G  P     + L+  +++A R    
Sbjct: 405  GYRADLGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEF 464

Query: 1095 YYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMILIKG 916
              + E+M+K G  P +   ++    LV+     +AL  +   KE G V   + + I +  
Sbjct: 465  CKLLEQMQKLGF-PVIADLSKFFSVLVEKKGPIMALETFGQLKEKGHVSVEI-YNIFMDS 522

Query: 915  LCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDGVDPD 736
            L + G + +A  L   M+    KPD FTY   I  L+  G +         I++    P 
Sbjct: 523  LHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPS 582

Query: 735  AMAYTTVITALCK---------------GNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEA 601
              AY+++   LC+               GNV++   E      K    I  A   ++ E 
Sbjct: 583  VAAYSSLTKGLCQIGEIDEAMLLVRDCLGNVSDGPLEF-----KYSLTIIHACKSNVAEK 637

Query: 600  FVAEGKIGSACDLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLF 454
             +         D+L  ++  G   D  I  S+I G+C    I +A K+F
Sbjct: 638  VI---------DVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKVF 677


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  443 bits (1139), Expect(2) = e-149
 Identities = 222/340 (65%), Positives = 256/340 (75%)
 Frame = -2

Query: 1287 GKQKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGR 1108
            GKQKG++H+FASYNAFAYCLNR+N FRAADQVPELMNMQGKPP+EKQFEILIRMH DA R
Sbjct: 682  GKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANR 741

Query: 1107 GLRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMI 928
            GLRVYYVYEKMKKFGIKPRVFLYNR+MD LVKT HLDLA++VYEDFKEDGLVEESVT+MI
Sbjct: 742  GLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMI 801

Query: 927  LIKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDG 748
            L+KGLC+ GRIDE  E+   MR++  +PDV  Y                           
Sbjct: 802  LVKGLCKAGRIDEVLEVWEEMRKDKVEPDVMAY--------------------------- 834

Query: 747  VDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSAC 568
                    TT++ ALC GN   +G E+F+EMK+KKYLIDRA+YGSLIE FV   ++GSAC
Sbjct: 835  --------TTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSAC 886

Query: 567  DLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTVNPILALY 388
            DLLK LM SGYRADL+I NSLIEG+CN  ++ KAYKLFQ TV E L P+F+TV P+L  Y
Sbjct: 887  DLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSY 946

Query: 387  AEQSRMDEICKLLEQMRKLGLHVIDDLSNFFSFMVGKGGR 268
            AE  RMD+ C LL QM+KLG  VIDDLS FFS M+ KG R
Sbjct: 947  AEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGER 986



 Score =  112 bits (280), Expect(2) = e-149
 Identities = 47/85 (55%), Positives = 72/85 (84%)
 Frame = -1

Query: 256  ETLKYLKARGFCNVSIYSIIIQALHKIGDVKGALSLFEEMKDSEYIPDSSTYSNVIPCFV 77
            E  ++LKA+G+C++SIY+I+++A+H+ G+VK ALSLF+++KDS + PDSSTYSN I CFV
Sbjct: 992  EVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFV 1051

Query: 76   DVGDVKAACSCYNKMKEKSWVPTIS 2
            +VGDV+ AC+CYNK+ E   +P+++
Sbjct: 1052 EVGDVQEACACYNKIIEMCQLPSVA 1076



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 63/311 (20%), Positives = 135/311 (43%), Gaps = 2/311 (0%)
 Frame = -2

Query: 1284 KQKGFRHDFASYNAFAYCLNRTNYFRAADQVPELMNMQGKPPTEKQFEILIRMHSDAGRG 1105
            K+ G +     YN     L +T +   A  V E     G       + IL++    AGR 
Sbjct: 753  KKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRI 812

Query: 1104 LRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMIL 925
              V  V+E+M+K  ++P V  Y  ++ AL   + +     ++++ K+   + +   +  L
Sbjct: 813  DEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSL 872

Query: 924  IKGLCREGRIDEAFELLGRMRENLCKPDVFTYTAMIRVLIAKGNLDGCLTVWEEILKDGV 745
            I+G     R+  A +LL  + ++  + D+  Y ++I  +     +D    +++  + + +
Sbjct: 873  IEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESL 932

Query: 744  DPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKY-LIDRAVYGSLIEAFVAEG-KIGSA 571
            +P+ +    ++ +  +    +  C +  +M+K  + +ID           + +G ++  A
Sbjct: 933  EPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDD--LSKFFSVMIEKGERLKLA 990

Query: 570  CDLLKALMSSGYRADLSILNSLIEGLCNANKIGKAYKLFQFTVQEGLSPDFVTVNPILAL 391
             ++ + L + GY   +SI N L+E +    ++ KA  LF         PD  T +  +  
Sbjct: 991  LEVFEHLKAKGY-CSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIIC 1049

Query: 390  YAEQSRMDEIC 358
            + E   + E C
Sbjct: 1050 FVEVGDVQEAC 1060



 Score = 73.9 bits (180), Expect = 8e-11
 Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
 Frame = -2

Query: 1146 FEILIRMHSDAGRGLRVYYVYEKMKKFGIKPRVFLYNRVMDALVKTDHLDLALAVYEDFK 967
            + IL+      G   +   +++ +K    KP    Y+  +   V+   +  A A Y    
Sbjct: 1008 YNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKII 1067

Query: 966  EDGLVEESVTFMILIKGLCREGRIDEAFELLGRMRENLCK-PDVFTYTAMIRVLIAKGNL 790
            E   +     +  L+KGLC+   ID A  L+     N+   P  F YT  I      GN 
Sbjct: 1068 EMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNA 1127

Query: 789  DGCLTVWEEILKDGVDPDAMAYTTVITALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSL 610
            +  + V  E++++G  PD + Y+ +I+ +CK    E+  +VF  M+++K L +  V    
Sbjct: 1128 EKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKLLTEANVI-VY 1186

Query: 609  IEAFVAEGKIGSACDLLKALMSSGYRADLSILNSLIEGLCNANKIG 472
             E  +   K  +A  +L  L   G  + L    S +  + N+N  G
Sbjct: 1187 DEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLPIENSNPDG 1232



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
 Frame = -2

Query: 1065 GIKPRVFLYNRVMDALVKTDHLDLALAVYEDFKEDGLVEESVTFMILIKGLCREGRIDEA 886
            G +  + +YN +++ +     +D A  +++    + L    +T   ++       R+D+ 
Sbjct: 896  GYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDF 955

Query: 885  FELLGRMRENLCKPDVFTYTAMIRVLIAKGN-LDGCLTVWEEILKDGVDPDAMAYTTVIT 709
              LLG+M++ L  P +   +    V+I KG  L   L V+E +   G    ++ Y  ++ 
Sbjct: 956  CSLLGQMQK-LGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGYCSISI-YNILME 1013

Query: 708  ALCKGNVAEKGCEVFEEMKKKKYLIDRAVYGSLIEAFVAEGKIGSACDLLKALMSSGYRA 529
            A+ +    +K   +F+++K   +  D + Y + I  FV  G +  AC     ++      
Sbjct: 1014 AIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLP 1073

Query: 528  DLSILNSLIEGLCNANKIGKAYKL--------------FQFT------------------ 445
             ++   SL++GLC + +I  A  L              F++T                  
Sbjct: 1074 SVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDV 1133

Query: 444  ----VQEGLSPDFVTVNPILALYAEQSRMDEICKLLEQMRK 334
                +QEG +PD VT + +++   +   ++E  K+   MR+
Sbjct: 1134 LNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRE 1174