BLASTX nr result

ID: Coptis25_contig00026743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026743
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258...   185   5e-45
ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245...   181   1e-43
emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]   177   1e-42
dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]           174   9e-42
ref|XP_003551101.1| PREDICTED: uncharacterized protein LOC100817...   173   2e-41

>ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258569 [Vitis vinifera]
          Length = 783

 Score =  185 bits (470), Expect = 5e-45
 Identities = 99/211 (46%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
 Frame = +3

Query: 6   WSGNSVTALLSMLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEAD 185
           WS  S T LL +LK   P+G TLPS Y   K +L+DLG+    IDAC ++CMLY K  A+
Sbjct: 170 WSNKSFTMLLELLKDAFPEGETLPSNYYEAKKILRDLGLHYIKIDACPSDCMLYSKEYAN 229

Query: 186 LTVCPQCETPRYXXXXXXXXXXXXXXXXX------VLRHFPLIPRLKRLYTISWMAREMT 347
              C  C   R+                       VLR+FPL PRL+RLY  S  A  M 
Sbjct: 230 ANECVVCGVSRWKSSDEHSTDEFTNSAKKKKIPAKVLRYFPLKPRLQRLYMSSKTASHMK 289

Query: 348 WHSRATPSWNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCW 527
           WH         MRHP+DSL WK   +  P FA E RNV LG+A+DGFNP G  S  YS W
Sbjct: 290 WHVDGRMEGEMMRHPVDSLAWKNFDNVHPSFALEPRNVRLGLASDGFNPFGNMSISYSMW 349

Query: 528 PVFVVPYNLPPSLCMKSEFHMMSLLIPGPKA 620
           PV ++PYNLPP +CMK  F M+SLLIP P A
Sbjct: 350 PVVLIPYNLPPWMCMKQTFFMLSLLIPSPTA 380


>ref|XP_003634113.1| PREDICTED: uncharacterized protein LOC100245099 [Vitis vinifera]
          Length = 1264

 Score =  181 bits (459), Expect = 1e-43
 Identities = 99/212 (46%), Positives = 117/212 (55%), Gaps = 6/212 (2%)
 Frame = +3

Query: 6   WSGNSVTALLSMLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEAD 185
           WS  S T LL +LK   P+G TLPS Y   K +L+DLG+    IDAC ++CMLY K  A+
Sbjct: 78  WSNKSFTMLLELLKEAFPEGETLPSNYYEAKKILRDLGLHYIKIDACPSDCMLYSKKHAN 137

Query: 186 LTVCPQCETPRYXXXXXXXXXXXXXXXXX------VLRHFPLIPRLKRLYTISWMAREMT 347
              C  C   R+                       VLR FPL PRL+RLY  +  A  M 
Sbjct: 138 ANECVVCGVSRWKSSDDHSTDEFTNSAKKKKIPAKVLRFFPLKPRLQRLYMSAKTASHMK 197

Query: 348 WHSRATPSWNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCW 527
           WH         MRHP DSL WK   +  P FA E RNV LG+A+DGFNP G  S  YS W
Sbjct: 198 WHVDGRMEDEMMRHPADSLAWKNFDNVHPSFALEPRNVRLGLASDGFNPFGNMSISYSMW 257

Query: 528 PVFVVPYNLPPSLCMKSEFHMMSLLIPGPKAL 623
           PV ++PYNLPP + MK  F M+SLLIPGP AL
Sbjct: 258 PVVLIPYNLPPWMYMKQTFFMLSLLIPGPTAL 289


>emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]
          Length = 1295

 Score =  177 bits (449), Expect = 1e-42
 Identities = 91/206 (44%), Positives = 115/206 (55%), Gaps = 1/206 (0%)
 Frame = +3

Query: 6   WSGNSVTALLSMLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEAD 185
           WS  S   LL +L    PDG  +P  +   K ML+D G+  + I AC+ +C L++K    
Sbjct: 174 WSNKSFDMLLELLLDAFPDGANIPKSHYDAKKMLRDFGLGYDSIHACKYDCALFWKENET 233

Query: 186 LTVCPQCETPRYXXXXXXXXXXXXXXXXXVLRHFPLIPRLKRLYTISWMAREMTWHS-RA 362
              CP C  PRY                 VLRHFPL PRL+RL+   + + +M WH  + 
Sbjct: 234 FHNCPVCNEPRYKNGKIPQK---------VLRHFPLKPRLQRLFMSRYTSADMRWHKEKR 284

Query: 363 TPSWNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVV 542
                 +RHP DS  WK   + +P FA++ RNV LG+ATDGFNP G  S  YS WPV +V
Sbjct: 285 FHEDGVLRHPADSEVWKDFDNQYPWFAQDARNVRLGLATDGFNPFGTMSNNYSMWPVVLV 344

Query: 543 PYNLPPSLCMKSEFHMMSLLIPGPKA 620
           PYN+PP  CMK  F MMSLLIPGP A
Sbjct: 345 PYNMPPWKCMKESFFMMSLLIPGPHA 370


>dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]
          Length = 606

 Score =  174 bits (442), Expect = 9e-42
 Identities = 87/205 (42%), Positives = 117/205 (57%)
 Frame = +3

Query: 6   WSGNSVTALLSMLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEAD 185
           W+ +S   LL +L++  P+GN +P  +   K  LK +G+  E I  C+N+C L++K    
Sbjct: 193 WTNSSFDELLELLQSSHPEGNKIPPSHYVAKKTLKKIGLGYESIHVCKNDCALFWKEHHS 252

Query: 186 LTVCPQCETPRYXXXXXXXXXXXXXXXXXVLRHFPLIPRLKRLYTISWMAREMTWHSRAT 365
           L  CP C   R+                 VLR+FPL PRL+RLY     A++M WHS   
Sbjct: 253 LHNCPVCNESRWVDTNTKGKKVPHK----VLRYFPLTPRLRRLYCSRHTAKDMIWHSTGR 308

Query: 366 PSWNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVP 545
                MRHP+D   WK     +P+F++E RNV LG+A DGFNP G  S+ +S WPV +  
Sbjct: 309 SEEGTMRHPVDGSSWKEFDIRYPNFSREPRNVRLGLAADGFNPFGNMSSAHSTWPVVLTT 368

Query: 546 YNLPPSLCMKSEFHMMSLLIPGPKA 620
           YNLPP LCMK    M+SLLIPGPK+
Sbjct: 369 YNLPPWLCMKESSFMLSLLIPGPKS 393


>ref|XP_003551101.1| PREDICTED: uncharacterized protein LOC100817991 [Glycine max]
          Length = 1027

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/204 (42%), Positives = 113/204 (55%)
 Frame = +3

Query: 6   WSGNSVTALLSMLKTWLPDGNTLPSKYPAMKAMLKDLGMKAECIDACENNCMLYYKTEAD 185
           W+  S + LL +L   LP+ NTLP  +   K ++  LG+  E I  C N C+LY K  AD
Sbjct: 211 WTDKSFSMLLELLSDALPEENTLPKSFYDTKKIISGLGLSYEKIHVCPNECILYRKDLAD 270

Query: 186 LTVCPQCETPRYXXXXXXXXXXXXXXXXXVLRHFPLIPRLKRLYTISWMAREMTWHSRAT 365
             +CP+C   R+                 +LR FPLIPRL+RL+     A  M WH    
Sbjct: 271 AEICPKCNLSRWKYNSDDVECRKKIPAK-ILRWFPLIPRLQRLFVSPKTACSMIWHEVGR 329

Query: 366 PSWNYMRHPIDSLQWKTCKDDWPDFAKEGRNVWLGIATDGFNPRGVQSTGYSCWPVFVVP 545
                +RHP DS  WK     +PDFA + RNV LG+ATDGFNP    +  +S WPV ++P
Sbjct: 330 TKDGLLRHPADSFAWKNFDCQYPDFACDARNVRLGLATDGFNPFKTMAISHSTWPVILIP 389

Query: 546 YNLPPSLCMKSEFHMMSLLIPGPK 617
           YNLPP +CMK    ++SLLIPGPK
Sbjct: 390 YNLPPWMCMKQPNFILSLLIPGPK 413


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