BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026725
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   136   2e-30
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   108   8e-22
ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cuc...   103   3e-20

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  136 bits (343), Expect = 2e-30
 Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 23/204 (11%)
 Frame = -3

Query: 566  PSYQVQTDQSRGDASLSRTSTLPHICDLDMGVIKTLPPEIFLEVNEMYGGKLSDLLEKNE 387
            PS Q+    S  +A L++ S LP +CDLDMGV+++LPPE+  E+N+MY GKLSD + K +
Sbjct: 812  PSLQMSPSSSNNEAPLNQVSELPALCDLDMGVLESLPPELLSEINDMYAGKLSDFIRKRK 871

Query: 386  DKDNKISDSVCNLFRRDLEGERNKGKEPLSCHQVHFEKSGSKNEVH-------------- 249
             K+  +S ++C       EG  N GK+ L C  V   K+  +N+V               
Sbjct: 872  GKNENVSGTMCTTSYEIYEGAINNGKQ-LHCSIVPIRKTPVENKVEKTLDREIATENSLL 930

Query: 248  ---------QRRPQEYHSASTSVAGSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEE 96
                     Q +  E    S S A S N    +   +++  MP+SLSQVDISVLQQLP+E
Sbjct: 931  QSSEVEKVKQYKIDEIQEVSVSGAVSLNVVDPASALEKSDLMPSSLSQVDISVLQQLPKE 990

Query: 95   LKVDILQLLPGHRRPECSDNCLVE 24
            + VDIL+ LP HR+PE S +  ++
Sbjct: 991  MWVDILEQLPVHRKPEHSSSAALD 1014


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  119 bits (299), Expect = 3e-25
 Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
 Frame = -3

Query: 566  PSYQVQTDQSRGDASLSRTSTLPHICDLDMGVIKTLPPEIFLEVNEMYGGKLSDLLEKNE 387
            PS Q+    S  +A L++ S LP +CDLDMGV+++LPPE+  E+N+MY GKLSD + K +
Sbjct: 790  PSLQMSPSSSNNEAPLNQVSELPALCDLDMGVLESLPPELLSEINDMYAGKLSDFIRKRK 849

Query: 386  DKDNKISDSVCNLFRRD----LEGERNKGKEPLSCHQVHFEKSGSKNEVHQRRPQEYHSA 219
             K+  +  +  + F+      L+ E+   +E ++      + S  + EV           
Sbjct: 850  GKNENLLHASHSSFKHTIVLILKVEKTLDRE-IATENSLLQSSEVEKEV----------- 897

Query: 218  STSVAGSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPECSD 39
            S S A S N    +   +++  MP+SLSQVDISVLQQLP+E+ VDIL+ LP HR+PE S 
Sbjct: 898  SVSGAVSLNVVDPASALEKSDLMPSSLSQVDISVLQQLPKEMWVDILEQLPVHRKPEHSS 957

Query: 38   NCLVE 24
            +  ++
Sbjct: 958  SAALD 962


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
            predicted protein [Populus trichocarpa]
          Length = 1191

 Score =  112 bits (280), Expect = 4e-23
 Identities = 70/179 (39%), Positives = 98/179 (54%)
 Frame = -3

Query: 572  TGPSYQVQTDQSRGDASLSRTSTLPHICDLDMGVIKTLPPEIFLEVNEMYGGKLSDLLEK 393
            TG S QV T+ S G       S  P +  LDMGV+K+LP E+F E+NE+YGGKL+D + K
Sbjct: 853  TGFSAQVDTNSSSG------ISAPPPLSHLDMGVVKSLPAELFSELNEIYGGKLTDFIAK 906

Query: 392  NEDKDNKISDSVCNLFRRDLEGERNKGKEPLSCHQVHFEKSGSKNEVHQRRPQEYHSAST 213
            +      I+           E   + G+ PL+ + +  +    +N   Q   +E  +A +
Sbjct: 907  SSVASENINSYPSTPSAEGQELAVDGGEGPLASNMIPLDFVMVENRAKQHMIEEAQAAPS 966

Query: 212  SVAGSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPECSDN 36
              AG  N   +S+  +    MP SLSQVD+SVLQQLPEEL+ DIL  LP HR+ E + N
Sbjct: 967  G-AGLQNEAISSVSPNNTDLMPLSLSQVDVSVLQQLPEELRGDILGQLPAHRKQELTSN 1024


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
            gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
            transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  108 bits (269), Expect = 8e-22
 Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 5/184 (2%)
 Frame = -3

Query: 572  TGPSYQVQTDQSRGDASLSRTSTLPHICDLDMGVIKTLPPEIFLEVNEMYGGKLSDLLEK 393
            TG S ++  + S G+AS +     P + DLDMGVI++LPPE+  E+N++YGGKL D + +
Sbjct: 766  TGGSAEMNNNFSNGEASFNHVPAPPRLFDLDMGVIESLPPELVSELNDIYGGKLVDFIAQ 825

Query: 392  NEDK--DNKISDSVCNLFRRD---LEGERNKGKEPLSCHQVHFEKSGSKNEVHQRRPQEY 228
            N+ K  + + S S+ +  + +   L     K    L   ++      S  E      +  
Sbjct: 826  NKGKSENGRGSSSIPSHGQEEEDYLIVSIFKRYSSLLLARITINFCTSCQEQQHTAEEIL 885

Query: 227  HSASTSVAGSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPE 48
             +A +S   S +  T ++G      MP+SLSQVD SVLQQLP+ELK DIL LLP HRR E
Sbjct: 886  LAAPSSGFSSNDGSTHTLGLGNTDLMPSSLSQVDTSVLQQLPDELKADILGLLPAHRRLE 945

Query: 47   CSDN 36
             + N
Sbjct: 946  LTSN 949


>ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1032

 Score =  103 bits (256), Expect = 3e-20
 Identities = 68/174 (39%), Positives = 99/174 (56%)
 Frame = -3

Query: 563  SYQVQTDQSRGDASLSRTSTLPHICDLDMGVIKTLPPEIFLEVNEMYGGKLSDLLEKNED 384
            S+ +Q + +R  +      + P +C+LD+GVI++LPPE+F E+NE+YGGKL DLL K+ D
Sbjct: 721  SHLIQMENNRHHSEALNPVSPPPLCNLDIGVIRSLPPELFSELNEIYGGKLIDLLSKSRD 780

Query: 383  KDNKISDSVCNLFRRDLEGERNKGKEPLSCHQVHFEKSGSKNEVHQRRPQEYHSASTSVA 204
            K+   S S+    R   +G    G + L+   +   K  S+N++  R       A  S +
Sbjct: 781  KNEVFSSSI----RVPSQG---SGGDGLTLSDIQGNKVQSENKI-SREGLYTMMAPISTS 832

Query: 203  GSFNSHTTSMGEDQNGFMPTSLSQVDISVLQQLPEELKVDILQLLPGHRRPECS 42
            G   SH   +       +P+SLSQVD SVLQ+LPE L+ DIL+ LP HR  E S
Sbjct: 833  G---SHRIDL-------LPSSLSQVDPSVLQELPEPLRDDILKQLPAHRGNELS 876