BLASTX nr result

ID: Coptis25_contig00026715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026715
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21104.3| unnamed protein product [Vitis vinifera]              246   1e-63
ref|XP_002283013.1| PREDICTED: histone-lysine N-methyltransferas...   242   3e-62
ref|XP_002519907.1| mixed-lineage leukemia protein, mll, putativ...   227   9e-58
ref|XP_003549306.1| PREDICTED: uncharacterized protein LOC100816...   194   6e-48
ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812...   192   2e-47

>emb|CBI21104.3| unnamed protein product [Vitis vinifera]
          Length = 1111

 Score =  246 bits (628), Expect = 1e-63
 Identities = 110/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 486  PNVDTMSAFDVSGVSHTPKNLVCSLCNRPGGSCIECRVVNCSVHFHPWCARQKGLLQSEV 307
            PNVDTMSAFDVSG S    N++CS+CNRPGGSCI+CRV+NC V FHPWCA +KGLLQSEV
Sbjct: 786  PNVDTMSAFDVSGASRPRANVICSICNRPGGSCIKCRVLNCLVPFHPWCAHRKGLLQSEV 845

Query: 306  EGVDNDKVGFYGRCVLHATHHASDSVDHPMDINFDTPGREEFTCARTEGYKGRKKDGFSH 127
            EGVDN+ VGFYGRC+LHA H + +    P++I  D+ G +E TCARTEGYKGRK++GF H
Sbjct: 846  EGVDNENVGFYGRCMLHAAHPSCELDSDPINIETDSTGEKELTCARTEGYKGRKQEGFRH 905

Query: 126  NLQERSNGNGECLVPQEQIDAWLHINGHKSCTVSVVKTQTSE 1
            NL  +SNGNG CLVPQEQ++AWLHING KSCT  + KT  S+
Sbjct: 906  NLNFQSNGNGGCLVPQEQLNAWLHINGQKSCTKGLPKTPISD 947


>ref|XP_002283013.1| PREDICTED: histone-lysine N-methyltransferase ATX1-like [Vitis
           vinifera]
          Length = 496

 Score =  242 bits (617), Expect = 3e-62
 Identities = 107/152 (70%), Positives = 126/152 (82%)
 Frame = -3

Query: 486 PNVDTMSAFDVSGVSHTPKNLVCSLCNRPGGSCIECRVVNCSVHFHPWCARQKGLLQSEV 307
           PNVDTMSAFDVSG S    N++CS+CNRPGGSCI+CRV+NC V FHPWCA +KGLLQSEV
Sbjct: 184 PNVDTMSAFDVSGASRPRANVICSICNRPGGSCIKCRVLNCLVPFHPWCAHRKGLLQSEV 243

Query: 306 EGVDNDKVGFYGRCVLHATHHASDSVDHPMDINFDTPGREEFTCARTEGYKGRKKDGFSH 127
           EGVDN+ VGFYGRC+LHA H + +    P++I  D+ G +E TCARTEGYKGRK++GF H
Sbjct: 244 EGVDNENVGFYGRCMLHAAHPSCELDSDPINIETDSTGEKELTCARTEGYKGRKQEGFRH 303

Query: 126 NLQERSNGNGECLVPQEQIDAWLHINGHKSCT 31
           NL  +SNGNG CLVPQEQ++AWLHING KSCT
Sbjct: 304 NLNFQSNGNGGCLVPQEQLNAWLHINGQKSCT 335


>ref|XP_002519907.1| mixed-lineage leukemia protein, mll, putative [Ricinus communis]
            gi|223540953|gb|EEF42511.1| mixed-lineage leukemia
            protein, mll, putative [Ricinus communis]
          Length = 1125

 Score =  227 bits (578), Expect = 9e-58
 Identities = 103/162 (63%), Positives = 119/162 (73%)
 Frame = -3

Query: 486  PNVDTMSAFDVSGVSHTPKNLVCSLCNRPGGSCIECRVVNCSVHFHPWCARQKGLLQSEV 307
            PNV+TMSAFDVSG S    N+VCS+C+RPGGSCI+CRV NCS+ FHPWCA QKGLLQSE 
Sbjct: 805  PNVNTMSAFDVSGASCPRANVVCSICDRPGGSCIQCRVANCSIQFHPWCAHQKGLLQSEA 864

Query: 306  EGVDNDKVGFYGRCVLHATHHASDSVDHPMDINFDTPGREEFTCARTEGYKGRKKDGFSH 127
            EGVDN+ VGFYGRCVLHAT+   +S           P  +E +CARTEGYKGRK+DGF H
Sbjct: 865  EGVDNENVGFYGRCVLHATYPTIESACDSAIFEAGYPAEKEVSCARTEGYKGRKRDGFWH 924

Query: 126  NLQERSNGNGECLVPQEQIDAWLHINGHKSCTVSVVKTQTSE 1
            N   +S G   CLVPQEQ DAW+HING KSC   ++K   SE
Sbjct: 925  NTNSQSKGKSGCLVPQEQFDAWVHINGQKSCAQGILKLPMSE 966


>ref|XP_003549306.1| PREDICTED: uncharacterized protein LOC100816713 [Glycine max]
          Length = 992

 Score =  194 bits (493), Expect = 6e-48
 Identities = 90/157 (57%), Positives = 114/157 (72%)
 Frame = -3

Query: 486  PNVDTMSAFDVSGVSHTPKNLVCSLCNRPGGSCIECRVVNCSVHFHPWCARQKGLLQSEV 307
            PNVDTMSAFDVSGVS    ++VCS+CNR GGSCIECR+ +CSV FHPWCA QK LLQSE 
Sbjct: 674  PNVDTMSAFDVSGVSRPRADVVCSICNRWGGSCIECRIADCSVKFHPWCAHQKNLLQSET 733

Query: 306  EGVDNDKVGFYGRCVLHATHHASDSVDHPMDINFDTPGREEFTCARTEGYKGRKKDGFSH 127
            EG++++K+GFYGRC+LH        +  P+D    +  ++EFTCAR EGYKGR+ DGF +
Sbjct: 734  EGINDEKIGFYGRCMLHTIEPRCLFIYDPLD-EIGSQEQKEFTCARVEGYKGRRWDGFQN 792

Query: 126  NLQERSNGNGECLVPQEQIDAWLHINGHKSCTVSVVK 16
            N        G CLVP+EQ++AW+HING K C+  + K
Sbjct: 793  N-----QCQGGCLVPEEQLNAWIHINGQKLCSQGLPK 824


>ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812602 [Glycine max]
          Length = 1985

 Score =  192 bits (488), Expect = 2e-47
 Identities = 89/157 (56%), Positives = 111/157 (70%)
 Frame = -3

Query: 486  PNVDTMSAFDVSGVSHTPKNLVCSLCNRPGGSCIECRVVNCSVHFHPWCARQKGLLQSEV 307
            PNVDTMSAFDVSGVS    ++VC +CNR GGSCIECR+ +CS+ FHPWCA QK LLQSE 
Sbjct: 1667 PNVDTMSAFDVSGVSRPRADVVCYICNRWGGSCIECRIADCSIKFHPWCAHQKNLLQSET 1726

Query: 306  EGVDNDKVGFYGRCVLHATHHASDSVDHPMDINFDTPGREEFTCARTEGYKGRKKDGFSH 127
            EG+D++K+GFYGRC LH        +  P+D    +   +EFTCAR EGYKGR+ DGF +
Sbjct: 1727 EGIDDEKIGFYGRCTLHIIEPRCLPIYDPLD-EIGSQEEKEFTCARAEGYKGRRWDGFQN 1785

Query: 126  NLQERSNGNGECLVPQEQIDAWLHINGHKSCTVSVVK 16
            N        G CLVP+EQ++AW+HING K C+  + K
Sbjct: 1786 N-----QCQGGCLVPEEQLNAWIHINGQKLCSRGLPK 1817


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