BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026709
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   135   5e-30
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   129   2e-28
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   129   3e-28
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   127   1e-27
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   126   2e-27

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/114 (60%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = +2

Query: 5    VYENCNFALF-SEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKRV 181
            V  +C FAL  S+P  + EAV+  +WK AM ++I  IE+NSTW+LVD PEG +VI LK V
Sbjct: 806  VNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWV 865

Query: 182  YKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQM 343
            ++TK+  DGSIQK KA LVAK YSQQ GVDF+ TF+PV R E +RVVLALAAQ+
Sbjct: 866  FRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQL 919


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/119 (51%), Positives = 87/119 (73%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2    DVYENCNFALFSEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKRV 181
            DVYE CN  +  EPQSF EA++DE W++AM+ +I +IEKN TW+LV+ P+  ++I +K +
Sbjct: 891  DVYERCNLCIV-EPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPKDKEIIGVKWI 949

Query: 182  YKTKFI------EDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQ 340
            ++ K+I       DG +Q+ KA LVAK YSQQPG DF+ TFAPV R++ IR ++A+AAQ
Sbjct: 950  FRVKWIFRXKYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQ 1008


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/114 (53%), Positives = 83/114 (72%)
 Frame = +2

Query: 2    DVYENCNFALFSEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKRV 181
            D+YE       ++P +F EAV+ E+W  AM ++I  IEKN TW+LV+LPE  +VI +K V
Sbjct: 906  DIYETTQVLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGVKWV 965

Query: 182  YKTKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQM 343
            ++TK++ DGSIQK KA LVAK Y+QQ GVD++ TF+PV R E +R +LALAA M
Sbjct: 966  FRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHM 1019


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/111 (54%), Positives = 84/111 (75%)
 Frame = +2

Query: 8    YENCNFALFSEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKRVYK 187
            +E CN+++  EPQSF EA + + W +AM+D+I +IEKN+TW+LVD P   +VI +K VYK
Sbjct: 836  HEFCNYSVV-EPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYK 894

Query: 188  TKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQ 340
            TK   DGS+QK KA LVAK + Q+PG+D+  T+APV R+E IR ++ALAAQ
Sbjct: 895  TKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQ 945


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/111 (54%), Positives = 84/111 (75%)
 Frame = +2

Query: 8   YENCNFALFSEPQSFNEAVQDEKWKRAMDDKITIIEKNSTWKLVDLPEGNDVISLKRVYK 187
           +E CN+++  EPQSF EA + + W +AM+D+I +IEKN+TW+LVD P   +VI +K VYK
Sbjct: 626 HEFCNYSVV-EPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYK 684

Query: 188 TKFIEDGSIQKRKA*LVAKSYSQQPGVDFNATFAPVVRMEIIRVVLALAAQ 340
           TK   DGS+QK KA LVAK + Q+PG+D+  T+APV R+E IR ++ALAAQ
Sbjct: 685 TKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQ 735