BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026705
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   234   1e-59
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   224   8e-57
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   223   2e-56
ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containi...   220   2e-55
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   213   3e-53

>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  234 bits (597), Expect = 1e-59
 Identities = 108/159 (67%), Positives = 132/159 (83%)
 Frame = -1

Query: 477 LEKQFETWVDKLKPGFTPDDVDQALKSQHDTDLALDIFRWTSQQRNYKHNHITYHTIIHM 298
           L+ QFE+W+  LKPGF+P DVD+AL++Q D DLALDIFRWT QQR Y+HNH+TY T+I +
Sbjct: 72  LQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHNHVTYLTMIKI 131

Query: 297 SIRSKRFGHAEALIEQVIAGACCGSEQLYNLIIKHCCRQKKLFNRAFDVYKKMIKSRDCK 118
           ++  KRF HAE LIE+VIAGAC  S  LYN II+ CC +K LFNRAFDVYKKM+ S DCK
Sbjct: 132 AVSGKRFRHAETLIEEVIAGACSVSVPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSEDCK 191

Query: 117 PSLETYTMLLNAVLSKFSQVPICYVYMHAVRSLHKQMKV 1
           PSLETYT+LLNA+L KF+++ +CYVY+HAVRSL KQMKV
Sbjct: 192 PSLETYTLLLNALLRKFNKLTVCYVYLHAVRSLTKQMKV 230


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  224 bits (572), Expect = 8e-57
 Identities = 103/158 (65%), Positives = 129/158 (81%)
 Frame = -1

Query: 477 LEKQFETWVDKLKPGFTPDDVDQALKSQHDTDLALDIFRWTSQQRNYKHNHITYHTIIHM 298
           LE QFETW   LKPGFTP DVD A+++Q D DLALDIFRWT+QQRNYKHNHITY T+I +
Sbjct: 5   LETQFETWTQNLKPGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLTVIKI 64

Query: 297 SIRSKRFGHAEALIEQVIAGACCGSEQLYNLIIKHCCRQKKLFNRAFDVYKKMIKSRDCK 118
            I  +R+  AE LIE+VIAGAC  S  LYN +I+ CC +K LFNRAFD+YKKM+KS DCK
Sbjct: 65  LISGRRYRQAETLIEEVIAGACEISVPLYNSMIRFCCGRKLLFNRAFDIYKKMLKSEDCK 124

Query: 117 PSLETYTMLLNAVLSKFSQVPICYVYMHAVRSLHKQMK 4
           P+L+TYT+L N++L +F+++ +CYVY+HAV+SL KQMK
Sbjct: 125 PTLDTYTLLFNSLLRRFNKLNVCYVYLHAVKSLTKQMK 162


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  223 bits (568), Expect = 2e-56
 Identities = 103/158 (65%), Positives = 129/158 (81%)
 Frame = -1

Query: 477 LEKQFETWVDKLKPGFTPDDVDQALKSQHDTDLALDIFRWTSQQRNYKHNHITYHTIIHM 298
           LE QFETW   LKPGFTP DV  AL+SQ D DLA DIFRWT+QQRNYKH+H+TY  +I +
Sbjct: 61  LETQFETWTQTLKPGFTPTDVQTALRSQSDPDLAYDIFRWTAQQRNYKHSHLTYFAMIKI 120

Query: 297 SIRSKRFGHAEALIEQVIAGACCGSEQLYNLIIKHCCRQKKLFNRAFDVYKKMIKSRDCK 118
            I  KR+ HAE L+E+VIAGAC  + QLYN +I+ CC +K LFNRAFDVYKKM++S DCK
Sbjct: 121 LIDGKRYRHAETLVEEVIAGACEMNVQLYNSMIRFCCGRKLLFNRAFDVYKKMLQSDDCK 180

Query: 117 PSLETYTMLLNAVLSKFSQVPICYVYMHAVRSLHKQMK 4
           P+LETYT+LLN++L +F+++ +CYVY+HAV+SL KQMK
Sbjct: 181 PTLETYTLLLNSLLRRFNKLNVCYVYLHAVKSLTKQMK 218


>ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Glycine max]
          Length = 372

 Score =  220 bits (561), Expect = 2e-55
 Identities = 107/158 (67%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 EKQFETWVDKLKPGFTPDDVDQALKSQHDTDLALDIFRWTSQQRNYKHNHITYHTIIHMS 295
           EKQFETWV  LKPGFTP DV QAL++Q D DLALDIFRWT+QQRNYKH H TY  II   
Sbjct: 51  EKQFETWVQALKPGFTPSDVAQALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLIIIKHL 110

Query: 294 IRSKRFGHAEALIEQVIAGAC-CGSEQLYNLIIKHCCRQKKLFNRAFDVYKKMIKSRDCK 118
           I  +R+ HAE LIE+VIAGAC   S  LYN II+ CC +K LFNRAFDVYKKM+ SRDCK
Sbjct: 111 IAGRRYHHAETLIEEVIAGACDDASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSRDCK 170

Query: 117 PSLETYTMLLNAVLSKFSQVPICYVYMHAVRSLHKQMK 4
           P+LETY++L N++L +F+++ +CYVY+HAVRSL KQMK
Sbjct: 171 PNLETYSLLFNSLLRRFNKLNVCYVYLHAVRSLTKQMK 208


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  213 bits (542), Expect = 3e-53
 Identities = 101/158 (63%), Positives = 127/158 (80%)
 Frame = -1

Query: 477 LEKQFETWVDKLKPGFTPDDVDQALKSQHDTDLALDIFRWTSQQRNYKHNHITYHTIIHM 298
           LEKQFE+WV KLKPGF+P DV++AL++Q D DLALD+FRWT+QQR YKHNH+TY TII +
Sbjct: 72  LEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNHLTYLTIIKI 131

Query: 297 SIRSKRFGHAEALIEQVIAGACCGSEQLYNLIIKHCCRQKKLFNRAFDVYKKMIKSRDCK 118
            I  +R   AE L+E+VIAGAC  S  LYN +I+ CC +K  FNRAFDVYKKM KS DCK
Sbjct: 132 LIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSDDCK 191

Query: 117 PSLETYTMLLNAVLSKFSQVPICYVYMHAVRSLHKQMK 4
           P+LETY ML N++L +F+++ + YVY+H+VRSL KQMK
Sbjct: 192 PTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMK 229