BLASTX nr result

ID: Coptis25_contig00026701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026701
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, pa...   112   3e-23
ref|XP_004150072.1| PREDICTED: coatomer subunit alpha-1-like [Cu...   112   3e-23
ref|XP_003540979.1| PREDICTED: coatomer subunit alpha-2-like [Gl...   112   3e-23
ref|XP_003537852.1| PREDICTED: coatomer subunit alpha-1-like [Gl...   112   3e-23
ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cu...   112   4e-23

>ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, partial [Cucumis sativus]
          Length = 855

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/68 (75%), Positives = 60/68 (88%)
 Frame = -1

Query: 205 LLCRTEDRITIFDLQQRIVLCDLQIPFIKYVVWPSDMDSVALLGKHVIVVANKKLVHQFT 26
           LLCR EDR+ I+DLQQRI+L DLQ PF+KYVVW +DM+SVALL KH I++ANKKLVHQ T
Sbjct: 466 LLCRAEDRVVIYDLQQRIILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCT 525

Query: 25  IHETIRVK 2
           +HETIRVK
Sbjct: 526 LHETIRVK 533


>ref|XP_004150072.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus]
          Length = 718

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/68 (75%), Positives = 60/68 (88%)
 Frame = -1

Query: 205 LLCRTEDRITIFDLQQRIVLCDLQIPFIKYVVWPSDMDSVALLGKHVIVVANKKLVHQFT 26
           LLCR EDR+ I+DLQQRI+L DLQ PF+KYVVW +DM+SVALL KH I++ANKKLVHQ T
Sbjct: 466 LLCRAEDRVVIYDLQQRIILGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCT 525

Query: 25  IHETIRVK 2
           +HETIRVK
Sbjct: 526 LHETIRVK 533


>ref|XP_003540979.1| PREDICTED: coatomer subunit alpha-2-like [Glycine max]
          Length = 1221

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 LLCRTEDRITIFDLQQRIVLCDLQIPFIKYVVWPSDMDSVALLGKHVIVVANKKLVHQFT 26
           LLCR+EDR+ IFDLQQRIVL DLQ PFIKYVVW +DM+SVALL KH IV+A+KKLVHQ T
Sbjct: 469 LLCRSEDRVFIFDLQQRIVLGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCT 528

Query: 25  IHETIRVK 2
           +HETIRVK
Sbjct: 529 LHETIRVK 536


>ref|XP_003537852.1| PREDICTED: coatomer subunit alpha-1-like [Glycine max]
          Length = 1221

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 LLCRTEDRITIFDLQQRIVLCDLQIPFIKYVVWPSDMDSVALLGKHVIVVANKKLVHQFT 26
           LLCR+EDR+ IFDLQQRIVL DLQ PFIKYVVW +DM+SVALL KH IV+A+KKLVHQ T
Sbjct: 469 LLCRSEDRVFIFDLQQRIVLGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCT 528

Query: 25  IHETIRVK 2
           +HETIRVK
Sbjct: 529 LHETIRVK 536


>ref|XP_004148533.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus]
           gi|449483541|ref|XP_004156620.1| PREDICTED: coatomer
           subunit alpha-1-like [Cucumis sativus]
          Length = 1217

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/68 (75%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 LLCRTEDRITIFDLQQRIVLCDLQIPFIKYVVWPSDMDSVALLGKHVIVVANKKLVHQFT 26
           LLCR+EDR+ +FDLQQR+VL DLQ PFIKYVVW +DM++VALL KHVI++A+KKLVHQ T
Sbjct: 466 LLCRSEDRVVLFDLQQRVVLGDLQTPFIKYVVWSNDMETVALLSKHVIIIASKKLVHQCT 525

Query: 25  IHETIRVK 2
           +HETIRVK
Sbjct: 526 LHETIRVK 533


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