BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026700
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protei...   290   3e-76
emb|CBI23038.3| unnamed protein product [Vitis vinifera]              290   4e-76
ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloropl...   286   6e-75
ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|2...   275   8e-72
ref|XP_004146234.1| PREDICTED: thylakoid lumenal 17.4 kDa protei...   271   2e-70

>ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis
           vinifera]
          Length = 244

 Score =  290 bits (742), Expect = 3e-76
 Identities = 159/237 (67%), Positives = 175/237 (73%), Gaps = 4/237 (1%)
 Frame = +3

Query: 3   EMATFSISFPRTSFSMHSPTPKSMS-SKLYSPIRINCCSS---PPLENHHQQTFKEIKKX 170
           +MAT SI     S    SP     S  +L+SP RI+C +S   P L+    Q FKE+K  
Sbjct: 12  KMATLSIPL---SLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQ-FKELKNV 67

Query: 171 XXXXXXXXXXXXXXXXXXXNSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDY 350
                              + RLPPLST+P RCERAFVGNTIGQANGVYD  IDLRFCDY
Sbjct: 68  AFGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 127

Query: 351 TNEKSNLKGKSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 530
           TNEKSNLKGKSL AALMS AKFDGADMSEVVMSKAYAVGASFKGVDF+NAVLDRVNFGKA
Sbjct: 128 TNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKA 187

Query: 531 NMQGVVFRNAVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 701
           N+QG VF+N VLSGSTF +AQL+DA FEDTIIGYIDLQ +C NTSIN +GRAELGCR
Sbjct: 188 NLQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 244


>emb|CBI23038.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  290 bits (741), Expect = 4e-76
 Identities = 159/236 (67%), Positives = 174/236 (73%), Gaps = 4/236 (1%)
 Frame = +3

Query: 6   MATFSISFPRTSFSMHSPTPKSMS-SKLYSPIRINCCSS---PPLENHHQQTFKEIKKXX 173
           MAT SI     S    SP     S  +L+SP RI+C +S   P L+    Q FKE+K   
Sbjct: 1   MATLSIPL---SLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQ-FKELKNVA 56

Query: 174 XXXXXXXXXXXXXXXXXXNSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDYT 353
                             + RLPPLST+P RCERAFVGNTIGQANGVYD  IDLRFCDYT
Sbjct: 57  FGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYT 116

Query: 354 NEKSNLKGKSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAN 533
           NEKSNLKGKSL AALMS AKFDGADMSEVVMSKAYAVGASFKGVDF+NAVLDRVNFGKAN
Sbjct: 117 NEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKAN 176

Query: 534 MQGVVFRNAVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 701
           +QG VF+N VLSGSTF +AQL+DA FEDTIIGYIDLQ +C NTSIN +GRAELGCR
Sbjct: 177 LQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232


>ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534416|gb|EEF36120.1| Thylakoid
           lumenal 17.4 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 228

 Score =  286 bits (731), Expect = 6e-75
 Identities = 152/228 (66%), Positives = 168/228 (73%)
 Frame = +3

Query: 18  SISFPRTSFSMHSPTPKSMSSKLYSPIRINCCSSPPLENHHQQTFKEIKKXXXXXXXXXX 197
           +ISFP +  S+ S   +    +L+ PI+I C  S   +    + FKE++           
Sbjct: 3   TISFPLSVRSLSSERSRFPVPQLHPPIKIICSGSA--DGSKSKPFKELQSVACGLLAAWA 60

Query: 198 XXXXXXXXXXNSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDYTNEKSNLKG 377
                     + RLPPLST+P RCE+AFVGNTIGQANGVYD  IDLRFCDYTNEKSNLKG
Sbjct: 61  VTSASPVIAASQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKG 120

Query: 378 KSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANMQGVVFRN 557
           KSL AALMS AKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAN+QG VF+N
Sbjct: 121 KSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAVFKN 180

Query: 558 AVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 701
            VLSGSTF EAQL DA FEDTIIGYIDLQ LC NTSIN EGR  LGCR
Sbjct: 181 TVLSGSTFDEAQLADAVFEDTIIGYIDLQKLCKNTSINLEGREILGCR 228


>ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|222859113|gb|EEE96660.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  275 bits (704), Expect = 8e-72
 Identities = 147/237 (62%), Positives = 168/237 (70%), Gaps = 6/237 (2%)
 Frame = +3

Query: 9   ATFSISFPRTSFSMH---SPTPKSMSSKLYSPIRINCCSSPPLENHHQQTF---KEIKKX 170
           ATFS+   +  F ++   S   +     L+SP++I C  S       +  F   KEI   
Sbjct: 4   ATFSLPLSQNKFPLYHFSSARRRFPIPDLHSPLKICCSGSRDGSQSRESLFQFKKEINYV 63

Query: 171 XXXXXXXXXXXXXXXXXXXNSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDY 350
                                RLPPLST+P RCE+AFVGNTIGQANGVYD  IDLRFCDY
Sbjct: 64  ACGILAAWAVTAASPVIAAGQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDY 123

Query: 351 TNEKSNLKGKSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 530
           TN+KSNLKGKSL AALMS AKFDGADM+EVVMSKAYAVGASF+GVDFSNAVLDRVNFGKA
Sbjct: 124 TNDKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFRGVDFSNAVLDRVNFGKA 183

Query: 531 NMQGVVFRNAVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 701
           +++G VF+N VLSGSTF EAQL+DA FEDTIIGYIDLQ +C NTSI  +GRAELGCR
Sbjct: 184 DLKGAVFKNTVLSGSTFDEAQLEDAIFEDTIIGYIDLQKICRNTSIGPDGRAELGCR 240


>ref|XP_004146234.1| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449522387|ref|XP_004168208.1|
           PREDICTED: thylakoid lumenal 17.4 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 237

 Score =  271 bits (693), Expect = 2e-70
 Identities = 133/158 (84%), Positives = 144/158 (91%)
 Frame = +3

Query: 228 NSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDYTNEKSNLKGKSLTAALMSG 407
           N RLPPLST+P RCERAFVGNTIGQANGVYD  IDLRFCDYTNEK+ LKGKSL AALMS 
Sbjct: 80  NQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSD 139

Query: 408 AKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANMQGVVFRNAVLSGSTFVE 587
           AKFDGAD+SEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAN+QG +F+N VLSGSTF +
Sbjct: 140 AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDD 199

Query: 588 AQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 701
           AQL+DA FEDTIIGYIDLQ LC+N +I+ EGRAELGCR
Sbjct: 200 AQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237