BLASTX nr result

ID: Coptis25_contig00026694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00026694
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522802.1| PREDICTED: uncharacterized methyltransferase...    63   3e-15
gb|AFK47008.1| unknown [Lotus japonicus]                               63   3e-14
ref|NP_565170.1| S-adenosyl-L-methionine-dependent methyltransfe...    60   7e-14
gb|AAG52104.1|AC012680_15 hypothetical protein; 38642-36701 [Ara...    60   7e-14
ref|XP_002889176.1| predicted protein [Arabidopsis lyrata subsp....    60   1e-13

>ref|XP_003522802.1| PREDICTED: uncharacterized methyltransferase At1g78140,
           chloroplastic-like [Glycine max]
          Length = 352

 Score = 63.2 bits (152), Expect(2) = 3e-15
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = +3

Query: 189 RTPLVSFLYERGWRQSFSIWGGFPGPDKE 275
           R PL+SFLYERGWRQ+FS+WGGFPGP+KE
Sbjct: 140 RVPLISFLYERGWRQTFSVWGGFPGPEKE 168



 Score = 43.1 bits (100), Expect(2) = 3e-15
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +1

Query: 7   NDTYLDLTVAGGAKQYSEYIPPSTELFRFNL 99
           N T+LDLT  GGAK Y E +P STELFR  L
Sbjct: 113 NQTHLDLTATGGAKSYGESMPASTELFRVPL 143


>gb|AFK47008.1| unknown [Lotus japonicus]
          Length = 352

 Score = 63.2 bits (152), Expect(2) = 3e-14
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = +3

Query: 189 RTPLVSFLYERGWRQSFSIWGGFPGPDKE 275
           R PL+SFLYERGWRQ+FS+WGGFPGP+KE
Sbjct: 140 RVPLISFLYERGWRQTFSVWGGFPGPEKE 168



 Score = 40.0 bits (92), Expect(2) = 3e-14
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +1

Query: 7   NDTYLDLTVAGGAKQYSEYIPPSTELFRFNL 99
           N T+LDLT   GAK Y + +P STELFR  L
Sbjct: 113 NQTHLDLTATSGAKNYGDLMPASTELFRVPL 143


>ref|NP_565170.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
           [Arabidopsis thaliana]
           gi|75329938|sp|Q8LBV4.1|Y1814_ARATH RecName:
           Full=Uncharacterized methyltransferase At1g78140,
           chloroplastic; Flags: Precursor
           gi|21592590|gb|AAM64539.1| unknown [Arabidopsis
           thaliana] gi|28393453|gb|AAO42148.1| unknown protein
           [Arabidopsis thaliana] gi|28827348|gb|AAO50518.1|
           unknown protein [Arabidopsis thaliana]
           gi|332197950|gb|AEE36071.1|
           S-adenosyl-L-methionine-dependent methyltransferase-like
           protein [Arabidopsis thaliana]
          Length = 355

 Score = 59.7 bits (143), Expect(2) = 7e-14
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 189 RTPLVSFLYERGWRQSFSIWGGFPGPDKE 275
           RTPLVSFLYERGWRQ+F IWGGFPGP+KE
Sbjct: 143 RTPLVSFLYERGWRQNF-IWGGFPGPEKE 170



 Score = 42.0 bits (97), Expect(2) = 7e-14
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +1

Query: 7   NDTYLDLTVAGGAKQYSEYIPPSTELFR 90
           N+T+LDL VA G+K+YSE +P STELFR
Sbjct: 116 NETHLDLAVASGSKRYSEPMPLSTELFR 143


>gb|AAG52104.1|AC012680_15 hypothetical protein; 38642-36701 [Arabidopsis thaliana]
          Length = 317

 Score = 59.7 bits (143), Expect(2) = 7e-14
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 189 RTPLVSFLYERGWRQSFSIWGGFPGPDKE 275
           RTPLVSFLYERGWRQ+F IWGGFPGP+KE
Sbjct: 143 RTPLVSFLYERGWRQNF-IWGGFPGPEKE 170



 Score = 42.0 bits (97), Expect(2) = 7e-14
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +1

Query: 7   NDTYLDLTVAGGAKQYSEYIPPSTELFR 90
           N+T+LDL VA G+K+YSE +P STELFR
Sbjct: 116 NETHLDLAVASGSKRYSEPMPLSTELFR 143


>ref|XP_002889176.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335017|gb|EFH65435.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 352

 Score = 59.7 bits (143), Expect(2) = 1e-13
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 189 RTPLVSFLYERGWRQSFSIWGGFPGPDKE 275
           RTPLVSFLYERGWRQ+F IWGGFPGP+KE
Sbjct: 140 RTPLVSFLYERGWRQNF-IWGGFPGPEKE 167



 Score = 41.2 bits (95), Expect(2) = 1e-13
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +1

Query: 7   NDTYLDLTVAGGAKQYSEYIPPSTELFR 90
           N+T+LDL VA G+K YSE +P STELFR
Sbjct: 113 NETHLDLAVASGSKTYSEPMPLSTELFR 140


Top